Dani027187.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- br
- Assembly
- GCA_951804985.1
- Location
- OX638134.1:65272749-65275468[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.5e-16 2.2e-12 47.5 0.0 2 44 336 378 335 379 0.96 2 3 0.0084 28 5.5 0.0 27 37 408 418 403 424 0.87 3 3 2.2e-17 7.2e-14 52.2 0.0 3 41 446 484 444 486 0.93
Sequence Information
- Coding Sequence
- ATGAATCACTTGAAATGGATGGGTCACCAGTCGACGATATACGACATACAGAAGAGTCTTCGCCACGACCCACATTCGTGTGAGGTGACGCTCGCTGGCCGTGGCAAATCCGTGCGAGCCCATCGTTTCGTATTGTCCTCTTGCAGTGATCTGCTGCGTTCGCTGCTGGCAGATGTACCCATTGGTCATGAGGCCACCATTGTGGTGCCGGACATCAAGGGTTCATTGCTGGAGAGTGTGCTCGCCTTCATTTACATGGGTGAGACGTGTCTCAATTCAAATAATTTGTCTGAATTCCTGGAGGCCATCAATCAATTGGGCATCAAGTCAGCCATCAGTTTTGAGTGTAATACGGGCATTGCTGTTGCAAGCGGCAGCAGTTCACCATTAAAAACGCTGGACATGCAAATGAGTCATGATGAAATTATCGAAGAGGAACCAATTCCATCGCCAAAAATGGAGgaGCAATCAGTTATGGAGGCTGCGGACCAACAGAACGTACGCGAGTTAGAATTTTTAGATGTTTACAATGAACCACAGCAAAAAATAACCTATTCCATAGAACATATGACACCGGCCACAAGTAATGAATTCATTTTAACCGAAAATTCTGGCACCTATACTTTTACGCAAAGTGATAAAATGGAGGGTGAAATTATTGCTGATGATAAAGTGGAAGAAGAACCCGAAGAAGATGATGAAGAGGAGGAAGTCGACGAAAGTCAAATTATGGAGGAGTACAGTAGCAGCGCCGAACCAATGATAGAAGTAAACAGTGCTAATAATGCCATCACCAACAACACCACCACGACAGCTTCTAACAACTCTACATTAAATTATCTAAAACCAAAACAGAAAACTGAAAAACGCCTACCACCACAGTATCAACATGCAAATCAATCGTCAAATACATTAGTATCTAGCGCCGTCGGTTCATCGATGTCCATGATAAGCCCTTCGCCAGACAGCAGTTACACGTCCAACTTTAATGATAGTCAGGCGCGTGATGAAAATTTAGAACAAGCCGTACAGGGTGTTCTGAATGAGGGCATGAGTCTGCAGAAGGCTGCAATTAAATATCACATCTCCAAAACTGTGCTCTGGCGACGCGTACGCAAACATCCCATGTACATGAAGACGGCACGTGAGAATCCTGTGATGGAGGCTGCGTGCAATCGTCTCAAGAACGGTGAATCACTTAAGGTAATCAGCCAAGCACTTGACATTCCAATGTCAACATTGCATCGACACAAGGTGCGCTTGGCACAGCAAGGACGTCTGCCCGATTATATTTCATTCAAGAAACGTGGTTGTTTCTCGAAGGAGCAGCTCAAGGAGAAACTCACCAAAGCGGTACAAGCGTGTCTGCATGAGGGCATGTCTCAGAATCATGCGGCAAACATGTTTGACATCCCAAAGAGTACTTTGTGGCGACACCTGCAGAAACGCATGAATGACGCGCAATTATGTTTGGATGGCGATGATGCAATTAAGGAGGAAATTATTTTATCCTAA
- Protein Sequence
- MNHLKWMGHQSTIYDIQKSLRHDPHSCEVTLAGRGKSVRAHRFVLSSCSDLLRSLLADVPIGHEATIVVPDIKGSLLESVLAFIYMGETCLNSNNLSEFLEAINQLGIKSAISFECNTGIAVASGSSSPLKTLDMQMSHDEIIEEEPIPSPKMEEQSVMEAADQQNVRELEFLDVYNEPQQKITYSIEHMTPATSNEFILTENSGTYTFTQSDKMEGEIIADDKVEEEPEEDDEEEEVDESQIMEEYSSSAEPMIEVNSANNAITNNTTTTASNNSTLNYLKPKQKTEKRLPPQYQHANQSSNTLVSSAVGSSMSMISPSPDSSYTSNFNDSQARDENLEQAVQGVLNEGMSLQKAAIKYHISKTVLWRRVRKHPMYMKTARENPVMEAACNRLKNGESLKVISQALDIPMSTLHRHKVRLAQQGRLPDYISFKKRGCFSKEQLKEKLTKAVQACLHEGMSQNHAANMFDIPKSTLWRHLQKRMNDAQLCLDGDDAIKEEIILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00624882;
- 90% Identity
- iTF_00624882;
- 80% Identity
- iTF_00624882;