Basic Information

Gene Symbol
ct
Assembly
GCA_951804985.1
Location
OX638130.1:3858825-3911516[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.5e-26 2.8e-22 79.5 0.0 3 71 1033 1102 1031 1108 0.94
2 3 6.2e-32 1.2e-27 96.8 0.0 3 77 1480 1555 1478 1557 0.96
3 3 8.7e-31 1.6e-26 93.1 0.1 3 76 1734 1808 1732 1811 0.96

Sequence Information

Coding Sequence
ATGAACATATGTGAAAAAATTTCACTCAGCACATCCTTAACCTCAATGAAACGTTATACCGCATACCAACAGCCAGCACGTGCAACACTGGCCGAAAAAGAAGTGAACACACTGAAGGAACAACTTTCCACCAACACACCAAACAGCGGCGACGAAGACGTCGACAACAACACCACCACCACGAACAACACCAACACAACAGCGGAgccaacaacaaacagcagtaGTGGTAACAACAACTGCGCCACAACCACCGACAACATTGATTGCGGCACCGCTGACAGCCAACAATTGTTGAGCAGCGTTGCTGCTGCCATCACACTGCATCAGAACGGTGGCAATCTGTTGGCCACCACACCATCGCCCTCACCGCCGCTCAGCGATAGCGGCAACAATTCCATACTCAATAATAGCAGCGGCGGCGGTggccacaacaacaacacactCAACGGTTGTCTCAACCCAAAGCTGTTTTTCAATCACGCGCAACAAATGATGATGGAAGCTGCAGCCGCAGCTGCAGCAGCTGCTGTACAACAGCAACATTCACCAATGCATTCACCaatacaacagcaacaacaacaagagtcTGTGCAACAACATCATCACCATCTCatcaacaataacaataataataataacagcaaCGATGCCAGCAAATTGATAACCACGTTGACAGCGGAGTTGAATTTGGCGGCAGCTGCCGCAGCCACCAACACAACAGATAAAATGGCAACCATCGATGATGATGAGGAGGAGGATGAGACgaccacagcaacaacaacagcagcaggagTTGCTGTTGACAGTACTGATGTTAGTTGTATTAATGATAATAACAATACTAGTTGTAGAATTAGCAAAAATAGTTGTAATATTGAGGATGACGAAgttgataatgatgatgatgaggagACATATAATGCTGTGGAACAGACGACAGAGCACAATGTTGATAGTAGTTGTAATAGTAATAAAAGGAATGGCGATCACGAGCATTCGGAGGATGCGAGTGGGAAGCAGAACCAACAGGCTGATCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTCGGTGAGGTGCAACGTTTGCGCACTCTCGAACAAACACACCTGGTACAAATTCACCGACTGGAGGAGCATCTGGAGGCCAAGCGCCAGCATATACTGCGTCTCGAGGCGCGTCTCGACAAGCAACAGATCAATGCTGCACTCGCAGAGACCGCAAGCACAGCATCTGCATCGCCAACACCCGCCGACGCGACCAGCACACCACAAACAGCACACAGCGCTGCTGCTGTAGTTGCTGCTACTGTTGAGCtggttgatgatgatgacgacgaacATGTTGAAGAAGATGTTGTCGCTAGTAATGGCGCTGCAGCAATGCATGTTGACGCacacgacgacgatgatgaggAGGAGGCAGACAATGTTGCTGATAGCGAATGCGCTAAATTGACAGACGCTGCAACAATGCATGAGCTGCAAATCAAAAAGGAAAACCAAAGCCCACTCGACGCCAACACCTTCAGCCAACAATCGGCCATCGTTGCTGCCGCCGCAGCAGCCGCTGCCTGCGTCAACGATCCAAACAAATTCCAGGAATTGCTGTTGGAACGCACCAAAGCCTTTGCCGCAGCCGAGGCGTTTAAAAGCACCGATGcaacaacagctgCTGAGTCAGAAGCCAGCAGCAGCGCAGTCGAAGCAGAGAGCGCaacggcagcagcaacagtagcaACAGTAGATGCTGCTGTTGTCATTGCAACGAAAATCGAAATAATTGACGATGCTGCGGACGCAGAGATCGCTGACGTTGACAACAACGATAATGAAAACGCCAACATTAACGACAACATTAACGACAATATTAACGATAACAATAACGACACCGTTAACGTTGAAGCAGACAAAAATGACTTAAACGAAAACGACGAAGACGACAATGCAAAAATCTCCAACATCCAACTGTCAAAAACCGACGAAATGCAACTTATTGCCGATACTGACTGCTCAGCAACATCTCCAGGTGTTGCTGATGCAAGTGTTGCTGCTGACAACcacaacgacgacgacaatgCTGCTGCcaacttcaaaacaaatgttGAACATTTTGGTTCTTTTCTGGGCGAAGAGCTGGTCAATTCTTATTGGCGACGCGGTTTTGAGCTGCCAACAGCATTAACTGCTGCTGCGGCcgccgccgctgctgctgcagcaacaacaacagctgcaGCAACGCctaatagcagcagcaacaacaacagcaatgcaCAAAAAACGCCAACAATGTTTCAAAGTTTCCAACAACAACAATCGTCATATTTGCAACATCATCAACAGCACGCACACCAACAGCACCTTCAccaccaccaacaacaacagcaacatgctGCCGTCCATCAGCAACATGCAGCGCAACAGCTGCCGCCGCTGCAACATCCACCCTCTTCAACAACGCTGCTCAGTCAGCTCGTTAATTCCACCTTCTCATCCAATTCTTCTCTACGCACAGATGCCatgcagcaacatcatcatcaccagcagcagcaacaccatcaccaccagcagcaacaacagcatcatcaccaccaccatatgcagcaacaacagcagcagcacttGTCCTCATCTTCCTCCTCTTCGTTGGAGCAACAACAGGACAAATCTACACATCATCACGACTCCTCCTCGACAGCCTCAACGCCGATACCACACGATCAGCGTTCCAATGATGGCCAACaccagcaacatcatcatcagcaacaacatcatGCGCTCAATGGCTCTGCGCACGCACACGCCCACTTGAAGCACGAGGACAATAACAATAGTCTCTGCGCCACACCCACTGGCAATATGCCGCCCTCGGGTGTCAGTGCTGCGCATCATCTTTCCGCCGGTTTTCTACCCGGTCTGCCATTCCAATTCCAAGAGCAGCGCGCACACTTTCGTTTTGCCGATGAACTGCAGCTGCCACCCGGCGCCTCAATGGCCGGCCGTTTGGGTGAGTCACTCATCCCGAAGGGCGATCCCATGGAGGCGAAATTGCAGGAAATGTTGCGCTACAACATGGACAAATATGCCAACCAAGCGCTGGACACATTGCATATTTCACGACGCGTACGCGAGCTGCTCTCGGTGCACAATATCGGTCAGCGCTTGTTTGCCAAATACATATTGGGCCTGTCGCAGGGCACTGTCTCTGAGTTGCTCTCGAAGCCGAAGCCGTGGGACAAACTGACGGAGAAGGGACGCGACAGCTACCGCAAAATGCACGCCTGGGGCTGCGACGATAATGCGGTGATGCTGCTCAAGTCACTGATACCGAAGAAAGATTCCGGCCTGCCGCAATATGGCCGCAACGATGACTCCATGTCTGACGATCGCATTGCGCACATATTAAACGAAGCCTCATCTTTGATTAAGAACACAACGCCCGGCGCTCTGCAGCAACACCATCAGCAGGAGCAACGTCGCAGCGTGCTCGACGATTCGCAACACAGCAACGAAGACTCAAAGTCACCGCATCAATCTTGCGCATCGCCCTTCTACAAGGAGCAACttaagcagcagcagcatcaacaacagcagcaggactctgctgttgctgccgctgcAGCAGctgcacagcaacaacaacaacaacagcgctTCCGTCAACAGGAGGAAATGACACAGGATAAAATGGCGCGTCTTTATCAGGAGATTATGGCGCGCGCACCACGTGACAATGCTTTCCCCGGCTTTTTGTTGTCGCCTTTCTTTGGTGGTGCCATGCCGCCAGTAGCGGGCCCAATGCCCAGTCAGCCATTCCCCGCCGCCATTGCAGCCGACGAGAATATCCGCCTCGCTTTTGAGCGTGAAATGGCCAAAATGCAGCAACAACCCAACCCGGGCAACATTCCGAGCTTCCCGAACTTCTCCAGTCTGCTGGCGCTACAGCAGCAAGTGTTAAGTGGCGCGCAGGATCTTAGCACAAAAGATGCCAAAGAGCTGAAACTGCTGAACGGACAGCGCAGCGCGCAGGATTGCAGCAATAACTCGTTGGACGCCTCGCCCGTTGCCTCTGCCAACAGCAACAAAGATGCACAAAAAGAGACACAAGATGCTGAGCGTCAGGCACAGCAGGCATTCCAGCAGCAGCTGCATGCCGCGCGCGCCGCTAGCCTCAAGAGCGATACGCCCGCGCCGCCCTCAAGCAATGCCACAAACTCAGCAGCACCCAGTCCGCTTAGCAACAACATATTGCCGCCCGCCATGACGCCCAATGCAGATGACTTCTCTGCCGTTGCCAGCCCACTGCAACGCATGGCCTCCATTACGAATTCACTCATCACACAGCCGCCCGTCACGCCGCATCACTCACAGCCGCAACGTCCCACCAAGGCGGTACTGCCGCCAATTACACAGCAACAGTTTGATATGTTCAACAATCTCAACACCGAGGATATTGTGCGGCGCGTCAAGGAGGCTCTCTCCCAGTACTCAATCTCACAGCGTCTCTTCGGTGAGTCTGTGCTTGGACTCTCGCAGGGCTCAGTAAGCGATCTGCTCGCACGCCCCAAACCCTGGCACATGCTCACACAAAAGGGTCGTGAACCTTTTATTCGCATGAAAATGTTCTTGGAGGATGAAAATGCAGTGCATAAACTCGTCGCCAGCCAGTATAAGATAGCGCCCGAGAAGCTCATGCGTACGGGCAGCTACAGCGGCAGTCCACAAATACCACAGGGACTCGCGAGCAAGATGCAAGCTACGCTACCCATGCAGAAAATGATGAATGAGCTGAAGATGGAGCCACAGGCACAGCATATTATGCAGCAAATGCAGGCGGCCGCCGCCATGTCGGCTGCCATGCAACAGCAGCATCAtgcacaacaacagcagcaacaccaacagcaccagcaacaacaacagcacgcAGCTCATGCTGCAGTGCAGGCCGCACAGGCTGCACAAGCCGCCGCACAGCAACATCAAAGCATGTTGCTCACATCGCCGGGACTGCCGCCACAACACGCCATCAGTTTGcccgccgctgctgctgctgccaatGCCGCTGCTGCAGCTGCCGCCGCCAACGACAAGAAGCCCATGCTCATGCCCACTCACTCGCCACATCAGTCGAACACCATGCGCAACATGCATCCGCACATGTCTCCCACCGTCTACGAAATGGCCGCACTCACGCAAGACCTCGACACGCAAATCATCACCACCAAGATCAAGGAGGCGCTGCTCGCGAATAACATCGGGCAGAAGATTTTCGGCGAGGCCGTGCTCGGTCTGTCACAGGGATCTGTCTCTGAGCTGCTCAGCAAGCCAAAACCATGGCATATGCTCTCGATCAAGGGACGTGAGCCCTTCATCCGTATGCAATTGTGGCTCTCCGATGCAAACAATGTTGAGCGCTTGCAGTTGCTCAAAAATGAGCGTCGCGAGGCGAGCAAACGTCGTCGCAGCACTGGCGGTCCCAATCAACAGGACAACAGCTCGGACACCTCGAGCAATGACACCAACGACTTCTACACACACAGCCCTGGACCTGGCTCAGTGGGTTCAGGCGTAAGTGGCGCACCCGCGAGCAAGAAGCAGCGTGTGCTCTTCTCCGAAGAACAGAAGGAGGCATTGCGTCTTGCATTTGCGTTAGATCCCTATCCAAATGTGGGCACCATTGAATTCTTGGCCAGCGAGTTGGGACTTGCTACGCGCACCATCACCAACTGGTTCCACAATCACCGTATGCGTCTCAAGCAGCAGGTGCCGCACGGACAGCCCGCCGACTCGCACATTCCCAGTCGCGAGAACACAAATGCAACGCCCTTCGATCCAGTACAATTCCGCATACTACTCACGCAGCGTCTGCATGAGCTGCACAAGGAGCGCATGGGCATGAGTGGCACACCTTCGTTGCCCTATCCGCCGTACTTTGCCGCCGCTGCATTGCTGGGACGCAGTTTAGTTGGTCTGCCAGGCGCAACAGGTGCAGGCGGAGAGCCTGATCTACAGGCGCTCAATCAGGCGTTCAAGGAGCAAATGAGCGGTCTCGATTTGACAATGAATGCGCTCAAGCGTGAGCGCAGCGATGACTATGACGATGATTGCGATGATACGCCGCATCTGAGCGACAACGAGGAGTCAATGGATGGACACGGCGATGGCGGTTCATCTATGGGCGGCCTCGGAGGCGATGACAAGTCAAGCGGCGACTATCGTGATACACCGCGCTCTTCGCAGTGTGGCAGCGCAATGGCCCGCACTTCACGTCGCAAACTGGCGGCACCGCAATGGGTTAATCCGGCGAACAGCGCTGATGTTAATGCGGCAGTAGGtgccgccgctgctgctgcgGCTGCAGCCGCTGAACGCATAATAAACGGCGTCTGTGTCATGCAGGCGGCGGATTTTAGCCGACGTGAAAACGAGAGCGCCAACGAGAACGCACAGCAGACGGGCACCGAGAGCGGCAGTGAACAACGCGGCGACAGCGAGCTGCACGACGATGTTGACATCGATCAGCGCTTCATGGAGCCCGAGGTGCGCATCAAGCAGGAGGATGACGACGAGTGCGACAATGAGGCGGAGGCGCAGAACGCAGCACGCTGTGAGCAGGAGCGACAGGCTTTGGAAGAGAAACTGCGCCAGGTGCGTGTTCAGCGCATGAGCGGTGCAGAGGAAGAGACAGCGCCGGTGCCGTGGGGCTACTAG
Protein Sequence
MNICEKISLSTSLTSMKRYTAYQQPARATLAEKEVNTLKEQLSTNTPNSGDEDVDNNTTTTNNTNTTAEPTTNSSSGNNNCATTTDNIDCGTADSQQLLSSVAAAITLHQNGGNLLATTPSPSPPLSDSGNNSILNNSSGGGGHNNNTLNGCLNPKLFFNHAQQMMMEAAAAAAAAAVQQQHSPMHSPIQQQQQQESVQQHHHHLINNNNNNNNSNDASKLITTLTAELNLAAAAAATNTTDKMATIDDDEEEDETTTATTTAAGVAVDSTDVSCINDNNNTSCRISKNSCNIEDDEVDNDDDEETYNAVEQTTEHNVDSSCNSNKRNGDHEHSEDASGKQNQQADLLAAKDKEIKALFGEVQRLRTLEQTHLVQIHRLEEHLEAKRQHILRLEARLDKQQINAALAETASTASASPTPADATSTPQTAHSAAAVVAATVELVDDDDDEHVEEDVVASNGAAAMHVDAHDDDDEEEADNVADSECAKLTDAATMHELQIKKENQSPLDANTFSQQSAIVAAAAAAAACVNDPNKFQELLLERTKAFAAAEAFKSTDATTAAESEASSSAVEAESATAAATVATVDAAVVIATKIEIIDDAADAEIADVDNNDNENANINDNINDNINDNNNDTVNVEADKNDLNENDEDDNAKISNIQLSKTDEMQLIADTDCSATSPGVADASVAADNHNDDDNAAANFKTNVEHFGSFLGEELVNSYWRRGFELPTALTAAAAAAAAAAATTTAAATPNSSSNNNSNAQKTPTMFQSFQQQQSSYLQHHQQHAHQQHLHHHQQQQQHAAVHQQHAAQQLPPLQHPPSSTTLLSQLVNSTFSSNSSLRTDAMQQHHHHQQQQHHHHQQQQQHHHHHHMQQQQQQHLSSSSSSSLEQQQDKSTHHHDSSSTASTPIPHDQRSNDGQHQQHHHQQQHHALNGSAHAHAHLKHEDNNNSLCATPTGNMPPSGVSAAHHLSAGFLPGLPFQFQEQRAHFRFADELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGLPQYGRNDDSMSDDRIAHILNEASSLIKNTTPGALQQHHQQEQRRSVLDDSQHSNEDSKSPHQSCASPFYKEQLKQQQHQQQQQDSAVAAAAAAAQQQQQQQRFRQQEEMTQDKMARLYQEIMARAPRDNAFPGFLLSPFFGGAMPPVAGPMPSQPFPAAIAADENIRLAFEREMAKMQQQPNPGNIPSFPNFSSLLALQQQVLSGAQDLSTKDAKELKLLNGQRSAQDCSNNSLDASPVASANSNKDAQKETQDAERQAQQAFQQQLHAARAASLKSDTPAPPSSNATNSAAPSPLSNNILPPAMTPNADDFSAVASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLASKMQATLPMQKMMNELKMEPQAQHIMQQMQAAAAMSAAMQQQHHAQQQQQHQQHQQQQQHAAHAAVQAAQAAQAAAQQHQSMLLTSPGLPPQHAISLPAAAAAANAAAAAAAANDKKPMLMPTHSPHQSNTMRNMHPHMSPTVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGGPNQQDNSSDTSSNDTNDFYTHSPGPGSVGSGVSGAPASKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLASELGLATRTITNWFHNHRMRLKQQVPHGQPADSHIPSRENTNATPFDPVQFRILLTQRLHELHKERMGMSGTPSLPYPPYFAAAALLGRSLVGLPGATGAGGEPDLQALNQAFKEQMSGLDLTMNALKRERSDDYDDDCDDTPHLSDNEESMDGHGDGGSSMGGLGGDDKSSGDYRDTPRSSQCGSAMARTSRRKLAAPQWVNPANSADVNAAVGAAAAAAAAAAERIINGVCVMQAADFSRRENESANENAQQTGTESGSEQRGDSELHDDVDIDQRFMEPEVRIKQEDDDECDNEAEAQNAARCEQERQALEEKLRQVRVQRMSGAEEETAPVPWGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00624633;
90% Identity
iTF_00624633;
80% Identity
iTF_00624633;