Dani021162.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- retn
- Assembly
- GCA_951804985.1
- Location
- OX638133.1:44736672-44768930[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2 2.9e+04 -3.4 0.0 27 63 107 118 91 128 0.54 2 2 3.6e-21 1.6e-17 64.6 0.0 2 79 263 338 262 339 0.94
Sequence Information
- Coding Sequence
- atggtaGCTGAACAATATCAGCAGTCACATGACGATCATTCCGATGATGAGATGCGCGACTGCGACTCTGCAGATGGCGTAGAGCACATGAACGGCGGCGGTACGGGACGTTTGAATACATCGATTACCAGCAACGGCGGCGGAGATATGAGTTATGCTGGTGTTGGTGGTGGCGCTGTTGGAGGAGGGGGCGGACGATCGCCAGATCACCAGTTGGATATGAAAATGAGTCATCATCATCAATTTTTGCCCAATCACCCGCTGGGTGCGCTCGGCAACTTCATGGGCATCAGTGGACTTCATGGCATTCCCAATTTACAGCAACAACACAACGATGTCCTGGAGAAGCTGAAAATGCAAGTGCGCGACATGAAGGTCGGTCTCATGGAGCAGGACTATGCTGCAGCACATGCGGCCACATTTGGAAATGTATTGCCGACACCGATCAATACTGCCTTTTCGCTGCCACCCACATCATTGGCCGCCTCCTTTGCCGCGCATCCGCAGCAGAATTTAGCTGCTGCCGCTGCAGCAACAGCGGCCGCCAACAATGTTGCCAACGTGCAAAACTCCAATGTGCCACCAACTGCGACGTCGGCGCACACGAACGGCGGCTCCTTCTCGTTCACATCGCCGTCGGCACCCAGTGCGAAAGATGttaATCCCGCTTCTAATTCATCCACATCCAGCGAGGCCTCGAATTCTTCACAGCAAAACAATGGTTGGAGTTTCGAGGAGCAGTACAAGCAAGTGCGGCAGCTCTACGAAATTAATAATGATCCGAAGCGTAAGGAATTCCTGGACGAATTGTTTTCATTCATGCAAAAGAGAGGCACTCCCATCAATCGTTTGCCCATCATGGCCAAGTCAGTTCTGGATCTGTATGAGCTCTACAACCTGGTTATCGCGCGCGGCGGACTTGTCGACGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGAATCTGCCGTCGAGCATCACGAGCGCCGCCTTTACGCTTCGCACACAGTAA
- Protein Sequence
- MVAEQYQQSHDDHSDDEMRDCDSADGVEHMNGGGTGRLNTSITSNGGGDMSYAGVGGGAVGGGGGRSPDHQLDMKMSHHHQFLPNHPLGALGNFMGISGLHGIPNLQQQHNDVLEKLKMQVRDMKVGLMEQDYAAAHAATFGNVLPTPINTAFSLPPTSLAASFAAHPQQNLAAAAAATAAANNVANVQNSNVPPTATSAHTNGGSFSFTSPSAPSAKDVNPASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINNDPKRKEFLDELFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLNLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -