Basic Information

Gene Symbol
Ubp1
Assembly
GCA_951804985.1
Location
OX638133.1:46060763-46073300[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-54 8.9e-50 170.0 0.3 7 190 245 425 239 433 0.90
2 2 7.6e-14 1.4e-09 38.6 0.9 186 222 460 496 452 497 0.90

Sequence Information

Coding Sequence
ATGTCTAATTTGACGCATcatttgaatagtacatcacgtACTTACATTAGTGGTTACCATCACCAGCATATTTCCAAAGATTACGAACAAGTAATCAACTTCGTCGATTCACCTCCTAATTCTAAAGAATCTTGGACAGACGAACAATCAAAAGGATCACCACGACCACAAATCATCGAAGTGCAAACCATTTATTCCAATAGTGGATCACGTAAAAGACGAATGGATTGGGATTCGTTGACAATTGGTGAAGGTGGAAACACAACATCGCAGTCTACTGACGCAGCAAGCAAAATTCCTCACTTATGTGGGTATTCAAATGACGGTGTACACGCCCAACAACATGAtaaagaaaaacagaaaaaggAAAAAGTTTCCGGACGCGGTAGTTGGAACGATGACATCGATTTCGATTTGAACGCAGAATTCAATACTAATTCTTACCTAAATAATGAATCCTTTCTATCCTTTTCATCAGCATTGACAGTGTTGAAACAGGAGCCGCAATCTGAGCAACTAAAGGACAACAAGAGCCCAATCGTAGATGAGGGAAACATTTCAAACACCGTGGCTGAAACCATTGTTAATACaaatcataaacaaaataatgataTGAGCTTAGAACATAGTGAGTCTGGCTTGACTACATCAGGATTGAAACCAAAATTGGGTGTGGATGAAAAGGTCAACGATACAGTCACTACAAATGACAATGTTGATGTTCTTCTACATAAGGAAAAGAATAATTCTAATCATCAATTGGAAAATACAGCTACGTCTGCACTTTCGGATGATCACAAATTTCAGTACATTTTGGCAGCCGCTACGTCAATAGCTACAAAAAACAATGAAGAGACCTTGACATATCTAAATCAGGGTCAAAGTTATGAGATTAAGTTAAAGAAAACAGGTGACTTGTCCTTTTATCGCGACAAAATTCTAAAGagtgttataaaaatatgttttcacgaGCGCCGTCTTCAGTACATGGAACGTGAACAAATGCAACAATGGCAAGCATCGCGTCCTGGTGAGCGCATCATAGAAGTCGATGTCCCGCTATCCTACGGCCTCTGCCACGTTTCTCAGCCACTGAGTCCGCACCATTTGAACACTGTCGAGGTATTCTGGGATCCATTGAAGGAGGTTGGTGTCTACATTAAGGTCAACTGCATATCAACGGAATTTACGCCCAAGAAGCACGGCGGTGAAAAGGGCGTGCCGTTTAGGCTACAAATCGAGACATATATCGAAAGCACCAACAGTGCAGCGCTGGTTGGTACATCAACCTCATCAGTGGCCCCGACAACAGCGACAAGCACCGAGACGTCAGGAAATTTGAGTCCATCCATTAACATACCAGCAACATTGGCAGCTGGAAAACAGCAAACAGTACATGCTGCCGCTTGCCAAATTAAGGTTTTCAAATTGAAAGGTGCCGATCGAAAGCACAAACAAGACCGTGAAAAGATACAGAAACGATCACAATCGGAACAGGAGAAATTTCAGCCGAGCTACGAATGCACCATAATGAACGACATTTCGTTGGATTTGATTACTCCGTACACGGGATGTTTCAGTCCAGAATATATGAAAGTTTGGCCAAATTCGCCGGTTCACATCCCAAAATACGATGGAATATTGCCGTATTCAAGCACTTCACCTCCCTCTAGTTCAAGTCCTATAGCCATCAATAACGTTACATCCAGCAATTCGCCAACTTTAAAACTTATGGACACTAACATGGTATCGCCTCAGCAGGTAGCTGTGGATCTGGAAGATTATACTATGAACATCATGCCTGACGCTACACCGGCACAAGTTACTCAGTGGTTGGCATATCATCGATTAACCACATATTTATCAACATTTGCTCACTTTTCAGGAGCCGATATTTTACGaATGTCAAAGGAGGATTTGATTCAGATTTGTGGCCTTGCTGATGGTATTCGTATGTTTAACATTTTACGTTCAAAAGTAATAACTCCGCGTCTGACTATTTACGTCAGTATGGATGGCAATAGTTATAATGCGATTTACTTAATTTCCAATACATCTAAAGAATTAGTACAAAAACTATATAAACTTCCCGGATTTTATGAACTGATCGCCAACAGttcaaatttaaatggaaaCAATTCTATAGAAAATGGCAGTATCTTTAATAACTGGGGTATGCACTCAAAATACTCAGGAAGTGGTTCCAGTATTTTCAACGACGTGGCAAAATCTTTTATTTACGTGACTGGGCCATCAGGAATACATGTGACTGTCACCGACGCAGTgcttaataatgaaataaaagacGGTAGTCTATATGCACTTGAAGTACAAAATGGAAAAGTTATTATGAAACTTCTAAACAAAAATGATAATTAA
Protein Sequence
MSNLTHHLNSTSRTYISGYHHQHISKDYEQVINFVDSPPNSKESWTDEQSKGSPRPQIIEVQTIYSNSGSRKRRMDWDSLTIGEGGNTTSQSTDAASKIPHLCGYSNDGVHAQQHDKEKQKKEKVSGRGSWNDDIDFDLNAEFNTNSYLNNESFLSFSSALTVLKQEPQSEQLKDNKSPIVDEGNISNTVAETIVNTNHKQNNDMSLEHSESGLTTSGLKPKLGVDEKVNDTVTTNDNVDVLLHKEKNNSNHQLENTATSALSDDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKTGDLSFYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLSPHHLNTVEVFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIESTNSAALVGTSTSSVAPTTATSTETSGNLSPSINIPATLAAGKQQTVHAAACQIKVFKLKGADRKHKQDREKIQKRSQSEQEKFQPSYECTIMNDISLDLITPYTGCFSPEYMKVWPNSPVHIPKYDGILPYSSTSPPSSSSPIAINNVTSSNSPTLKLMDTNMVSPQQVAVDLEDYTMNIMPDATPAQVTQWLAYHRLTTYLSTFAHFSGADILRMSKEDLIQICGLADGIRMFNILRSKVITPRLTIYVSMDGNSYNAIYLISNTSKELVQKLYKLPGFYELIANSSNLNGNNSIENGSIFNNWGMHSKYSGSGSSIFNDVAKSFIYVTGPSGIHVTVTDAVLNNEIKDGSLYALEVQNGKVIMKLLNKNDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-