Daus137167.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- stc
- Assembly
- GCA_029891345.1
- Location
- CM057000.1:34505907-34534840[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.61 6.8e+04 -2.5 0.8 14 19 358 363 354 363 0.75 2 6 0.36 4e+04 -1.7 0.2 4 10 392 398 392 399 0.92 3 6 1.4e-07 0.016 18.7 14.2 3 18 410 425 409 426 0.91 4 6 2.9e-09 0.00033 24.1 9.2 1 18 468 485 468 486 0.97 5 6 7.1e-08 0.0079 19.7 13.1 4 18 610 624 609 625 0.96 6 6 1.2 1.3e+05 -3.4 2.0 5 10 654 659 654 659 0.93
Sequence Information
- Coding Sequence
- ATGGCAGAATGGAATAGTTACCAGCCTGAAAATAGCAGATACCCTCCCAATTTCAACTACTTTCCAAACAATGGAAGAGGCAACGTACATTCCTACAACGGGTCATCTGAAAATTGGAGTTGTCCTTACCCAAACGACTTTTACATGTCCCAAGGCACCTACTCCCCTGCAGTTCCTGACATCGCCTATGGACCGATTCCTTCTCCATACCCAGTGTACGAAGCTACGTATGACGCGTCCCCAGTGGAGAGTAACCTAGCTGTGGCGGCTGCTTCGTGCTTGCCACCAACTGCAAAAGAATTTGTTCCTAGAGGCTGCGATTCGTATTACTCAAATTACGATGCACGTCCCGAGACGAAAAATTTGCAGGGGTGGAACGAACGTAGTTCCTGGAAGCCACCAGGCCAGCAGAATGGAGACCAATTTTATTCGAATGCAAGTAGGCCATCGAATAACGTATCTGGGAACTACTTCCAAAACAACACGTCGGCGAGAAACATATCGAGGAGAGGAAATAGATCAAACTGGatccctcctgtaggctatcagCAGAGGAATTTCAAAGGGCATGGACTTGCTGCAGACGAGAGCCACAGTGGTCGAGATGGCCGTAATGAATTCCTGTGTAACGGGTTTGCAGGTGCAAGGGTTTCACAAGAACCCAGTTCGTCTGTGCCAAGTCGAGATGATAGTTGGTCACCTCGTGGGAATAAGTATCGTGACTCTAATCAAAAGCTGTTGCAGCAGTCCCGTGTGTATTCCAATGCAAAATGGCAAAATAGTGATGATACCAAGTACAGCCTTCCTAGGGGTGGAAAGGATAGGAATGCTTCCCCAAAAGACGGCAGCCACATCTTACACTTCCAGAAACTACATCGCCAACTGCACGAGTATGGGACCTTTTATCCACCACATGAGGACATCACGGTAAGATGTATTCGTATGCCTCATTTTGAAGAAGAAGTAGTTCTGGACAGAGTTGAGGCGAACCCGTCCACAATCACATGTGCGATCGCTCACGATATGACCGTCAGCCACACCTCTGTGTGGAGAGTGCTCCATAGTGGCTGGCGGTGCCCAGCATGTCAGAATGTGACGGAGAAGGTGCCGAATGAATACTACTGCTTCTGCGGGAAGGTGCAGGAGCCCAAGTGGAACCGTCAGGACACCCCTCACTCCTGCGGGGAGATGTGCGGGAAGTCGCGCACAGACAAGCGGCCGGACTGCACTCACCGTTGCACTCTACTGTGCCACCCAGGCCCGTGCCCTCCTTGCCTTGCTCAAGTGAACAGGTGTGCAGTTGCTTCATCACCACCACACAGCCAGGAGGTGACGTGCAACTCGTCCACGGTTGGGGTGTCCCAGTACAGTTGTGGCGAGGTCTGCAAGAATTGGCTGCAGTGCGGGAACCACTGGTGTGAGGCACTGTGCCACCCAGGGTCATGCCTGTCCTGCGAGCTGGCCCCAGATAAGGTGACCCACTGCCCCTGTGGCAAGACCCCGCTGAGCGAGGAGCAGGTACGAACCAACTGCCTCGACCACGTACCCACCTGCCAGCTCGCCTGTGGCAAGAAGCTAAGCTGTGGCCAACCAACGCTACGTCATctgcaagaccctgtggaagttcCGGTACCCAGAGAGTGCTTCACTCCACCAGAAAAGACCGGACTGACCGAGTACTCTCAGTGGGTCGCAGAGCATCTGAACCAACCTGATCAGTCACCAATGCCCGTAGTAGCTTATCTCGTACCAGCTGTACTGTATCCCACACCTCTGCCTAAGCCATATATCTCGGCTTACCAGTACACCGCACCAGTATACAACCCCCACACATGCCAAGATCAGTGCCATAGCGGGCCATGCCCACCGTGCCTATCCACCACGCTGGTGCGATGCCGCTGTGGCAACATGGATAGGGAAATACCGTGTGTGGAGCTCGTCAGTCGTGCTGATGATGCCCGTTGCGAGAAGAAGTGTACCAAGCAGCTTGAGAGGCTTCTACCACTGCCAACCAGCAACCCCAGTGACTGCCACTACCAGAAGCTCACCAATAGTAAGCTTGCAGACATTCTGCCCAACACTTTCCGTCACCGGCCCTTCTGGTTCAACGACCATCTAACCACACCCGCTGACCTTCTGATAAGTGGCCCCCGTAAAGCACAGCAGGAAAGACACTTCTCTGATAGGTTACCTGAGATAGCAGCGCTCTCCTCTCTTCTGGGGGCTGCACTGGGGTGGCTGGCTTCGGAACAGCGGCTGACACTGGTTGCGGCGGAGAAGTGCTCCTGCTGCTTGACGAGGTGTCAAGGAAGGAGATCTACTTCTCCCGTCACGAACTTCGTGTACTTTTCAAACCGTACTAGAACTGGCAGTGGATGCCATCCAGTGGTTCGGGCCCTAGTCACCGGACGTGACACCAAGGTCGGGATCGCCAACTCCAACTTAGGCAGCCAAGAAAGCAACTGGTGGAATCGTCAGCACCTGACCGACCACTACCGCAGCTCCACAACCAATGAGACTCTGAAGACAGCAGAGACCAACTGGCCATCGTACAGCGCCTCTGCTGCTCCGCAGAAACAGAACACGCAGAACCCTGGTAAATCGACGTTGCCCGAGAGGGTCAGTGTCACGGTCCGCCATATCGCCAGACCAGTGAAACTGGACTTTGTACCTAGCAGACAGTCAACGTGGCCAACATTAGTGTCCACAGCACCGACCAGCCTGCCCGTCACAGGTCGACGACATCTAGCCCACCAACATAAACTGCACATCAGGAACCAGTACCAGTTGCAACCCAACTCCTCCAGAGCTGACTAA
- Protein Sequence
- MAEWNSYQPENSRYPPNFNYFPNNGRGNVHSYNGSSENWSCPYPNDFYMSQGTYSPAVPDIAYGPIPSPYPVYEATYDASPVESNLAVAAASCLPPTAKEFVPRGCDSYYSNYDARPETKNLQGWNERSSWKPPGQQNGDQFYSNASRPSNNVSGNYFQNNTSARNISRRGNRSNWIPPVGYQQRNFKGHGLAADESHSGRDGRNEFLCNGFAGARVSQEPSSSVPSRDDSWSPRGNKYRDSNQKLLQQSRVYSNAKWQNSDDTKYSLPRGGKDRNASPKDGSHILHFQKLHRQLHEYGTFYPPHEDITVRCIRMPHFEEEVVLDRVEANPSTITCAIAHDMTVSHTSVWRVLHSGWRCPACQNVTEKVPNEYYCFCGKVQEPKWNRQDTPHSCGEMCGKSRTDKRPDCTHRCTLLCHPGPCPPCLAQVNRCAVASSPPHSQEVTCNSSTVGVSQYSCGEVCKNWLQCGNHWCEALCHPGSCLSCELAPDKVTHCPCGKTPLSEEQVRTNCLDHVPTCQLACGKKLSCGQPTLRHLQDPVEVPVPRECFTPPEKTGLTEYSQWVAEHLNQPDQSPMPVVAYLVPAVLYPTPLPKPYISAYQYTAPVYNPHTCQDQCHSGPCPPCLSTTLVRCRCGNMDREIPCVELVSRADDARCEKKCTKQLERLLPLPTSNPSDCHYQKLTNSKLADILPNTFRHRPFWFNDHLTTPADLLISGPRKAQQERHFSDRLPEIAALSSLLGAALGWLASEQRLTLVAAEKCSCCLTRCQGRRSTSPVTNFVYFSNRTRTGSGCHPVVRALVTGRDTKVGIANSNLGSQESNWWNRQHLTDHYRSSTTNETLKTAETNWPSYSASAAPQKQNTQNPGKSTLPERVSVTVRHIARPVKLDFVPSRQSTWPTLVSTAPTSLPVTGRRHLAHQHKLHIRNQYQLQPNSSRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -