Daus075047.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_029891345.1
- Location
- CM056995.1:359870261-359898555[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.7 1.9e+05 -3.9 11.0 13 19 84 90 81 90 0.89 2 12 0.6 6.7e+04 -2.4 1.0 9 13 96 100 94 101 0.76 3 12 0.81 9.1e+04 -2.9 0.8 6 18 116 120 115 121 0.49 4 12 2e-09 0.00022 24.7 16.4 1 18 126 143 126 144 0.98 5 12 2 2.2e+05 -5.3 4.1 7 11 148 152 148 162 0.68 6 12 0.58 6.5e+04 -2.4 0.6 6 10 169 173 168 173 0.88 7 12 1.1e-09 0.00012 25.5 14.8 1 19 179 197 179 197 0.99 8 12 3.6e-08 0.0041 20.6 11.8 1 18 232 249 232 250 0.97 9 12 0.33 3.7e+04 -1.6 0.5 1 5 259 263 259 268 0.72 10 12 0.0041 4.5e+02 4.5 1.7 1 8 284 291 284 292 0.91 11 12 0.0033 3.7e+02 4.8 8.2 10 18 438 446 436 447 0.93 12 12 8.5e-07 0.095 16.3 14.3 1 19 456 474 450 474 0.86
Sequence Information
- Coding Sequence
- ATGACGCCAGACAGCCTTGAAGTGTGGGATTGCAAGCTTTATTTATACATAGCGCACAGGGTCAGCACGGAGGTAGCGGTAGCGATAGAGGGCGGAGATGGCCAAAGGCAGCCGAAGCTGGCAGCTACTTCTCCTCACGCAGCAAAAGGTCAGAGGGGTAAGAGAGTGGCAGCGTGGTGCAAAGCAGGTTGTGTTGAAGCAGGATGCATCAGTTGGCCCGAGCTAACTCTGGGCTTCAAGGCATGCTGTGGACCATGCCCATCATGTCCCAAGATGGTGAAGACGACGTGCCACTGCGGCAAAGCAGATCCACGCCAGCAGCGCTGCAGCCGCAAGGCATGGGCGTGTGGTCAGCCATGCAGGCGCATACTTCAGTGTGGTCGCCATGCCTGCCAACAGCCCTGCCACCCAGGAGAGTGCAAGCCATGCGCCCGCACCAGCCAGCAGGCGTGCCACTGCAGCATGTGTACGGAGCTGCGCCCCTGTGCCAGCCCTCGCTGGAGTTGCGACAAGGTGTGCGGGAAGCGGCTAGACTGTGGCCAGCATGACTGTGAGAGGGTGTGTCACTCGGGAGAGTGCGGGTCATGCCCACTGTCGGGGCCACGCTCATGTCCCTGCGGCAAGACCACCCACCGCCTGCCATGCACTGACACTGTGCCACCCTGCAGAGACACGTGTGGGCGCACATTGCGGTGTGGGCGCCACACCTGCTCCCGTCCCTGCCACCGCGACGACTGCGGCTCGTGTCTGGAGGTGGTATCAAGGCCGTGCCGCTGTGGTCTTCACAACAAGGAGCTGCCATGCCAGAAGGAGTACCTCTGCGAAACAAAGTGCAAGAAGATCAAGGACTGTGGCAGACACCCCTGCAATCGCAAGGTCTGGTGGTTCTGCTCCTCACTTGAACACCTCAACCAGTGGGTGAGGTGTGTCTGCGGTCTTAATGGTGGGAAAAGTGGTGACTGTAACTCTGAGGGGTTAGGCCTATCAGGCAAGCGGGCGGTCAGAACTCTGGCCTTTGTTGAAGTATTGCCAAGTGCAGGAGGAGGAATTGGTTTGCAATTCAGGTTACTCTCAGAGGCagcaTCAGAGaactggaacggcgagttctgcGTTGTGTCACAAAATGCCCTTGCTACCACTCGAGCCAAAGACGAGCTACGTGAGCAACGATATTTCACCACACCGCAAACTGCTGAAGCACCAATCCCTAGCACATCCCGTCTGTCACCAAGTACAGTTAGTACAGAAGCAAGTAGCAAGTTAGACCCCTCCAAGGGGCTAGGTAACCGGAATATCGAGTACGTGGTTCAATGCTGTGATGGAAGTTGCCCACCGTGCGAGAAGGAGTGTGGGCGCACTCTACGGTGTAGGAATCACAAGTGTGTGGGCTTGTGCCATCGTGGCCCATGCTACCCCTGCCCACGCACCGTGCAGGTGGCTTGCTGCTGTGGGGAGACGACAGTCACAGTGCCGTGTGGCAGGGAAAGGAAAACGCGACCCCCGCGCTGCCCGCGCCGCTGCAGGTCAGTGAGCGTCAGCTCCCTATGCCTCCTGCCGTCACTACAGCTGTAG
- Protein Sequence
- MTPDSLEVWDCKLYLYIAHRVSTEVAVAIEGGDGQRQPKLAATSPHAAKGQRGKRVAAWCKAGCVEAGCISWPELTLGFKACCGPCPSCPKMVKTTCHCGKADPRQQRCSRKAWACGQPCRRILQCGRHACQQPCHPGECKPCARTSQQACHCSMCTELRPCASPRWSCDKVCGKRLDCGQHDCERVCHSGECGSCPLSGPRSCPCGKTTHRLPCTDTVPPCRDTCGRTLRCGRHTCSRPCHRDDCGSCLEVVSRPCRCGLHNKELPCQKEYLCETKCKKIKDCGRHPCNRKVWWFCSSLEHLNQWVRCVCGLNGGKSGDCNSEGLGLSGKRAVRTLAFVEVLPSAGGGIGLQFRLLSEAASENWNGEFCVVSQNALATTRAKDELREQRYFTTPQTAEAPIPSTSRLSPSTVSTEASSKLDPSKGLGNRNIEYVVQCCDGSCPPCEKECGRTLRCRNHKCVGLCHRGPCYPCPRTVQVACCCGETTVTVPCGRERKTRPPRCPRRCRSVSVSSLCLLPSLQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -