Daus168967.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- pnr
- Assembly
- GCA_029891345.1
- Location
- CM057003.1:92418450-92447783[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-18 5.1e-14 55.1 3.0 1 35 91 124 91 125 0.97 2 2 1.2e-19 3.9e-15 58.7 5.4 1 35 148 181 148 182 0.97
Sequence Information
- Coding Sequence
- ATGCTGTCACCCAGCGTCGTCGCCAAACCCATCGGAACATCCAGcaggggggggggctgtgacgcaagcaaggcgccgagcggCGTGACAGCCCGACAGCCGCTGTCTATTGTTTATGAGTTTCCCAGAAAAGGGGGTCAGGAGGCAATGAGCGTGTCGGCCCGGGGGACGGGATTGGTGAGGTGGatccaccgccacagtgccgggcTACCTTCCGGCGCCAGTGTGGTGGTGTGTCGCGCAGGCCAGATGCTGGACATGGTGAAGGAGTGCGTCAACTGCGGCGCCAACTTCACGCCGCTGTGGCGTCGCGACGGCACGGGCCACTACCTCTGCAACGCGTGCGGCCTCTACAACCGCATCAACGGCGTCAACCGGCCGCCCATCCGCAGCCAGCAGAAGAAGGTCACCGCGACGGGCAACAGAAGGAACGGCGTCTCGTGCGCCAACTGCGGCACGACCAGCACCACGCTGTGGAGGAGGAACAACAACGGGGAACCCGTCTGCAACGCCTGCGGACTATACTTCAAGCTTCACAACGTGAGTACAAGCGACGGCGTTGCTCCGCTGGTGATGCGGGAGGAGTCACATAGCCCGCCCCGACCGGCAAGACACCGCAAGCACGGCACGGTGAACAGGCCGCTGAGCATGAAGAAGGACGGCATCCAGACTCGGAAGCGGAAGCCGAAGAATCCTTCGATACCTTCGTCGGGCGGCAGCCCCTTGGCCGGAGGAGGCATCAAGTCGGAAGGCAAGCTCAACTTCCACAGTGAGTCGGTGCGCCATCGTGTTTCAAACCTGCGCCCGTCTGCCTGCAGTCATTCTCCTCCTTAA
- Protein Sequence
- MLSPSVVAKPIGTSSRGGGCDASKAPSGVTARQPLSIVYEFPRKGGQEAMSVSARGTGLVRWIHRHSAGLPSGASVVVCRAGQMLDMVKECVNCGANFTPLWRRDGTGHYLCNACGLYNRINGVNRPPIRSQQKKVTATGNRRNGVSCANCGTTSTTLWRRNNNGEPVCNACGLYFKLHNVSTSDGVAPLVMREESHSPPRPARHRKHGTVNRPLSMKKDGIQTRKRKPKNPSIPSSGGSPLAGGGIKSEGKLNFHSESVRHRVSNLRPSACSHSPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -