Basic Information

Gene Symbol
-
Assembly
GCA_029891345.1
Location
CM057005.1:109547109-109560936[-]

Transcription Factor Domain

TF Family
zf-C2HC
Domain
zf-C2HC domain
PFAM
PF01530
TF Group
Zinc-Coordinating Group
Description
This is a DNA binding zinc finger domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 1.9 1.4e+05 -3.5 0.1 11 17 140 146 139 147 0.78
2 13 0.0036 2.7e+02 5.2 0.0 5 13 225 233 223 248 0.75
3 13 0.0036 2.7e+02 5.2 0.0 5 13 256 264 254 279 0.75
4 13 0.0036 2.7e+02 5.2 0.0 5 13 287 295 285 310 0.75
5 13 0.0036 2.7e+02 5.2 0.0 5 13 318 326 316 341 0.75
6 13 0.0036 2.7e+02 5.2 0.0 5 13 349 357 347 372 0.75
7 13 0.0036 2.7e+02 5.2 0.0 5 13 380 388 378 403 0.75
8 13 0.0036 2.7e+02 5.2 0.0 5 13 411 419 409 434 0.75
9 13 0.0054 4e+02 4.7 0.0 5 13 442 450 440 463 0.90
10 13 0.0036 2.7e+02 5.2 0.0 5 13 473 481 471 496 0.75
11 13 0.0036 2.7e+02 5.2 0.0 5 13 504 512 502 527 0.75
12 13 0.0036 2.7e+02 5.2 0.0 5 13 535 543 533 558 0.75
13 13 0.0036 2.7e+02 5.2 0.0 5 13 566 574 564 589 0.75

Sequence Information

Coding Sequence
ATgtctcgtcgacgtcaaagggcgccatatcagcatgcgaGTAAGTTCCAACTGGGCAGAATTATCGGTTTCCGGGAAACGGGGTTGTCACACCGTGACATTTccgctcgtacagggcatgctgctacgacagagatcacgggatggcCGCCATATCTTTTCCGCATGTCCGTGATGGACCATACAACCTTGTCCAcaatgttggctcgacactggagcactgcaacggatGTGGACCTTTCTGCATCGACGgctcgacgccgtctgctgcggacTGGACTGGTGGCACACATACCATTCCCGTCAGCTTCCATTCAGAGACGTAGCAGCACGGGACAACACTCAGCCACAGGCCGCAGCGCCATCCAGGACTACTTGGTCACACAGCTCGTCGCAGTACAAGACCCTCGCAGACAAGGCCACTTCGCCGGCCGTACGTCAGAACTGTTGTCCGACGACGAACAGCTGTCCGTCGACACAGAACAAGCGAAACTACAGTTCGACGAGCGAACCTATAGTGCCACGCTGTTAGAGATGCTTTCACGATACAGCGACGCGATGCgatgcgacgagctatacttacTGTTTCTCAATTGTGCGACCATCTGTCGGCGACGCACCCTGTCTGAGATGCTTGCCGCTAGACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGGCACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGGCACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGGCACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGGCACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTACGTGCTCGTCTACTGGACACATCGTTGCCTATGTGCGGTTCTGCTGTCTAG
Protein Sequence
MSRRRQRAPYQHASKFQLGRIIGFRETGLSHRDISARTGHAATTEITGWPPYLFRMSVMDHTTLSTMLARHWSTATDVDLSASTARRRLLRTGLVAHIPFPSASIQRRSSTGQHSATGRSAIQDYLVTQLVAVQDPRRQGHFAGRTSELLSDDEQLSVDTEQAKLQFDERTYSATLLEMLSRYSDAMRCDELYLLFLNCATICRRRTLSEMLAARRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLGTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWAHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLGTSLPTCSSTGHIVAYVLVYWTHRCLRARLLGTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPTCSSTGHIVAYVLVYWTHRCLRARLLDTSLPMCGSAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-