Basic Information

Insect: Dryococelus australis
Gene Symbol: Rreb1
Assembly: GCA_029891345.1
Location: CM057004.1:98390369-98416550[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00023 0.2 15.6 0.3 1 23 304 326 304 326 0.99

2 14 0.00011 0.098 16.6 0.1 1 23 341 363 341 363 0.97

3 14 8.5e-06 0.0074 20.1 5.0 1 23 369 391 369 391 0.99

4 14 0.1 89 7.3 5.2 2 23 481 503 481 503 0.95

5 14 0.033 28 8.9 0.1 1 23 706 728 706 728 0.97

6 14 0.17 1.5e+02 6.6 0.7 1 23 736 758 736 758 0.97

7 14 0.0017 1.5 12.9 2.3 1 23 764 787 764 787 0.97

8 14 0.0017 1.5 12.9 1.5 1 23 1261 1284 1261 1284 0.96

9 14 0.00017 0.15 16.0 0.4 2 23 1527 1548 1526 1548 0.97

10 14 0.029 26 9.0 5.3 1 23 1554 1577 1554 1577 0.97

11 14 0.00065 0.57 14.2 2.7 1 23 1631 1655 1631 1655 0.96

12 14 0.79 6.9e+02 4.5 1.3 1 23 1756 1778 1756 1779 0.95

13 14 0.0039 3.4 11.8 0.5 3 23 1836 1856 1834 1856 0.96

14 14 0.0089 7.8 10.6 5.9 1 23 1862 1884 1862 1884 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00023	0.2	15.6	0.3	1	23	304	326	304	326	0.99
2	14	0.00011	0.098	16.6	0.1	1	23	341	363	341	363	0.97
3	14	8.5e-06	0.0074	20.1	5.0	1	23	369	391	369	391	0.99
4	14	0.1	89	7.3	5.2	2	23	481	503	481	503	0.95
5	14	0.033	28	8.9	0.1	1	23	706	728	706	728	0.97
6	14	0.17	1.5e+02	6.6	0.7	1	23	736	758	736	758	0.97
7	14	0.0017	1.5	12.9	2.3	1	23	764	787	764	787	0.97
8	14	0.0017	1.5	12.9	1.5	1	23	1261	1284	1261	1284	0.96
9	14	0.00017	0.15	16.0	0.4	2	23	1527	1548	1526	1548	0.97
10	14	0.029	26	9.0	5.3	1	23	1554	1577	1554	1577	0.97
11	14	0.00065	0.57	14.2	2.7	1	23	1631	1655	1631	1655	0.96
12	14	0.79	6.9e+02	4.5	1.3	1	23	1756	1778	1756	1779	0.95
13	14	0.0039	3.4	11.8	0.5	3	23	1836	1856	1834	1856	0.96
14	14	0.0089	7.8	10.6	5.9	1	23	1862	1884	1862	1884	0.98

Sequence Information

Coding Sequence: ATGCTGGGAGGGGGAGAAGGGGCGGGGCAGATCGCGTCTCTCCCGCTCGCCCGCGCGCGATCATTACCGCCCGCAACCTCGTGCGCGCCGCAGGTGAAGCTGCCAGCTGACGTCACCGCGGAGGCCCGCCGCGCAACAACCGTGCAACAGCCCCCGGCTAGCTCCCGCTCCACCCCCAGCCGACCTGTCGTCGCCGGGTATGTACGACGCACGCTAGTCATCAGTTCGCTTATACAGTGGCTGGTTTCACGTCCTAGAGAAGTTCATCGGGGGTGTGCGACGTTCACACAGTCGCTGACTGAATTCGCCGAGGACACTAGCGACGTCTCCTTGACACGCCcacactCGCTGGGGGGTCCACACAAGAAGCGGTCAGCAATGCAAGACATGGCAACACTGCAGCAGCCCTTCGTGACGTCACCGTCTCCCGCCACGGCTGGTGCAGTGCAAGGTGTCATCGAAGTTGGACATGTTGAAAAGAAAGGACATTTAGGGTCGGTGCTGCACACAGTCTCTTCCATGCGTGGGGGCCGCGGCAGCGGAGCGGCTAGAGCGCTCTCCTCCAACGAAAGGAAACTGGAGTCGTCAGCCTTGGCAATCGGGAGCGGTAGTGAAGTCCAACAGGAAACTTCCAGAACATACGCGGAAACTTGCGAAGAGAACGAAGAGACTGTGCAGTCGGCAAGACACCTCGACATGGATAACGATGCAGCATCCGACTCGAACAACGAATCACGCAATGAAGAGTGCGGGGAAGCCGTGGTGGAGAAGACAGACAACCCGGAACGCGAGACGGACGACGACGATGATGATGACGAcgacgacgatgatgatgatgatgatgatgatgatgacagcGGCGACGCGAGAGTACCAGAAAGTGGCGGAGGCGACTACAGCGCAAGTTCGTACAGGTGTCCAATCTGCGACGTGGTGCTGGGGTCGCAGCACGACTTCACGCTGCACATCCGGTCGCACAACAACGACTGCGGGGAAGCGGTGGCGACGCCGCTGGGTACCTTCGTGTGCCGGGTGTGCGGGAAGGCGCTCAGCTCCAGCAGCTCTCTGGACCGACATGTGCTGGTGCACTCAGGAGAGCGGCCCTTCAGGTGCTGCGTGTGTGGGGTGTCCTTCACGACGAACGGGAATATGCACCGCCACATGCGCACCCATGGCGAGGATGGACCTTGCCCCCCAGGGGCCAAGAGACGTCGGCTCGGCAGCCCCTCTCCTGGTGATGTCGACAAGAGAAAAGCACTGGACCTTTCTATGGATGGCGATGATGCTGTACGGAGGAAGCTTAAGACTCCGATCCAGCCGAAGAAAACTGAGCAGATGCAGGTTCAAAGAGTCCAGTGTCCAGTCTGCTGCCGGGTGGACTTTGCGTCGTTAAACGTGCTGGAGATGCATCTTGAGGAGAGGCACCCAGAGTACAAGGCCCGGTGCCACCTCTGTAACCTTATTTTCAAGAACCATCGAGCTCTCAACTTGCATCGCACCATGAAGCACTTTGGCGAGGAAGGAGACAAGGCTGCCACCGTACTCGGGTTTCGAGATCTCACATTCGTAGACTTCTCTAGCGAGAAGTTTCCTATTATAGCCAAAACCCTATGTGAGCAGTCTCTCCACCGAGCCAGCAGCATGTTCCACAGGTTCCAGTGCGAGAGGTGCGTCAGGGCGTTCCCCTGCGGCAAGGCACTCGCTATCCACCGGCAGAGCTGCGACGGCATACGAGGAGCACGGCACGTCGACTACGAGTCGGAGGAGGAGCACAAGCAGGACGACTTCCTTGCCCATCTCGACCTGCAGACCAAGTCGGCATCCTTATCGCCTCCGCCCGACTATATGAGCAAGGAAGACAGTTTCGCGAGTGACCCGTATTTCAATGGCGAGCGGGATATCGATGGCGAGCGGGATCTCGCCAACATTCAGAGCATCCTGTCGCTCACGTCTGCCGAAACCCTGCTACAAGAGCTGAGTGTGTCTCCCCGTCCGAGGAGCGACATTACACCACCAGACTCGGTCACGAAGTCGTCCGACTCCTGTAATGGTGCAGATGACGAACAGCAGGACTGCTTTGCCGCAGAGTTCCGTCGTATGAAACTGAAAGGGGAGTTCCCGTGTCGTCTGTGTACAGCTGTGTTTCCAAATCTGCGTGCTCTGAAAGGCCATAATCGTGTTCACTTGACTGCAAGCAGTGGTTTACATCGCTGCAACATGTGCCCTTTCTCCAATCCCGACAAAGCTGTTGTAGTGCGACATATGCGCACTCATAATGGTGACCGACCCTATGAGTGTGCACTGTGTAATTATGCTTtcaccaccaaggcgaactgtgAGCGTCATTTGCGCAACAGGCATTCCAAGCTTTCTAGGGACGAAGTTAAGAATTCGATTATTTACCATCCATCTGAAGATCCAACAAATGATCCAGATGGCCAAATTAAGGCACTTTCTGCTCGTGAAGAAGTAAAGAGATCATTGGTGTTCAGCAGTCATTCAAACGATGGAAGCACGACTGAACATAGGGAGCAGCAGGACTGCATTAAACTTCCGGATGAGGAAAATTCTCGTCCCTTAACAAATTTTGTACCAAAGAAAATGCTACAAACACAAAATCGGTCATGGGAAACTCATGAGGTTGCCACCATGACTCATTTTGCAGATGATGAAGAGATGCAAGACAGTGAAGATAATCAAACAGTATCTGATGATAGTTTGCTAGTCAAccttaccaaaaataataatatgatcaAAAATAACTTCATGTTTAAAAGACACTCAGAAGACCAAAGATTATTTATGAAAGAGCAAGTTAGAACATCGACTCCATGCACACAATTTGTGAAAAAGGATGATTGTTATGAACAGCACGATGAAGACGATAATGATGGGTATGATATGATGGAGGATGaagttgatgatgatgatgatgatgatgatgatgaaacaaACATTCCACTAGATCTTAGTATGGATGCATTAGATTTAAGTAAAAAGAAGCCTAGTTCCACAGTTCAGTTTGGTGTCAAAGATGTGATTGAAGCACAGCCACAGGACTTATCTAAAAAATCATTGGTGCACAACACAGAATTAACGAAAATAACTCCAGTGCAACCAGTGTTTGCTCCACCACACAAACCTCCTGTTGGTACAAACAGTATACCACCAACTGTTTCCCCAGCAGTTTACAAGTGTTCCCTTTCTCCATTAGGTCACAGCACCAGTCCCATGCCCAAAGTTGAACTGAAAGGTGGGAATATGTATCATGGTCATGCACTGTACTTGAACAACAATGGTTACTTCCGTGCACAACCTCCGTTTCAAATACCATACCCAATGTCGCCCTACAACCATAACCTCTTCTCTGAAAACAACATGAAGGACTTGGCGGAGATGAAAGAAAGGTTGCAGAAGGAGCTGATACGTGGTCTCCAGCTTACATCTGGTGGAAAACTGCTTGACCCTGTGTTAATGGCTGACAGAGTTCAGGCATTTCATGGACTGGCAGAAATGTGTGGCAGGGCTAAACCAGAGATTAAAATTGATTATgcagaaagtaaagtaaaaatagaaaGTGCTGGAAATTCAGTGCTCCCACCTACCATAGACAACAAGGAGGGCATTGTAAATAACATTCCCATGACTCCTCCCAAGTTAACTGTATCACCCAAACCTACTGTGCGAGAAAAGGACTCCTCCGCATCAGTAAAAATGGTCATAAAAAATGGTGTTCTGATGCCAAAACAAAAGCAGAGACGATATCGCACAGAAAGGCCATTTTCTTGCGAGTTCTGCTCAGCACGATTTACTCTTCGTTCAAACATGGAACGCCACATCAAGCAGCAACACCCACAATGTTGGAGCCAGCGGCAGAGAAGTGGAGGTGCACTGAGTAGACGAGGCCACACTGCTGCACTGCCCCACTCCCAGGACTCCAGAAGTTCTTTAGACAGTCTGGGACATGTTGACCTTAATGTGCCATCACTAGACAATGAAAAGCAAACCAAGGTAGAAGAAGCACCAAAGACTGCATTGGAGATGGACTTGAAACAGGTTAACGATGTTTTACCAGATACTgctaacaacaaaattaatggcaacaataataataataagcctTACATCTCAGAGGAGGTAAAACTAGCAATAGCCCAACAACTTAAGTCAAAACTTAATCAGCCGTCTGCCAATGCAGTTGTAAAGACTGAAGATGAAGAAGAGGATGATGATGGTTTAGTGATTGATGAAGAGAAAGAAGCTACAGGTGAAGAAGAAGTAGATCATCAGAGAATAGGGAAGGAAGATGGGGTTGTGGATTTGGCTAGCGTTTCGCGGCTCTTGGACAATGCCACGACGCAGAACCGTGCATTCCAGCAATATTTCCCTGCGACGCAAGATGGGGAAGAAGAGGGCAGAGGAGAGGGCAGCGAAGATGATGAGGAAGGCTTGGTGGCTGGCAGCAACAGTGAGGGCAATAATTCTGGCAGTGATGAAAACAGATCTGAGTCGGAGACACACGGCAATGGCAGCGAGACCAAGAAGAAAAGTGCGTACTCTCTAGCTCCAAACAGAGTCTCGTGTCCGTACTGCAATCGCAAGTTCCCATGGTCATCGTCACTGCGACGCCACGTTCTCACTCACACCGGGCAGAAGCCATTCAAGTGCCCCCACTGCCCATTGCTTTTCACCACCAAGTCAAACTGCGACAGACACCTGCTGAGAAAGCATGCTGGCCATGGTAATGTCGCCAATACGAGCAACACCGGCCTCTCAACACCCACAAACACCGGCAACACCACGGTAAGCAGCAATACAAGCAGCAGCTGTGGAGAAACATCTCCCCCCTCTACTAATGGTTATACAATGCGTAATGTCCCAGATCGTCCCTTTAAGTGCAATTACTGCCCCAGCTCCACGTTCTCAACAAACAGCAACCTTCGGAAGCATTTGTCCTCGAAGCATTACAACAGCACCTCAAATGGCCCTCTCAGTCCGGTAGCCATCGCTCGTAACAGCTTGTCTGGTGATGAGAACCATTGCGTGGGGGCAGAAGACAGCAATAGTGAAGATGTTGATGATAATGAACTGGAAATTGGTACTGGAAGAACTTTACCACTTCCAGAGAAAGATAGCTATCCCCAACCAGAGCTGAAGAGCCCTTTACCAGTGTTAGACATAGTGGTCCCAAAAATAGTTGCTGCTTTTGATAACCACAGTTCAGGAATGTCAACATCTTCGTCTGTCTCGTCCTCTGATTTGCCGTTCAAATGCCACCTTTGCGAAGGCAGCTATGCAGAGAGACAGGAAGCTTTGGACCACATCAGGGACCATCATCCACCTGAGTTTGAGCTGCTTATGTCCAAGGGTGCGCTGGAGGCGACGACGGGGAACGACGACAGCGTTCACCATGTTGGTGCTCACGATGAAGGAAACACTGTAGGAGATGAGAACTTGGAGCAGCTCCGTGGGAAGTTTCCAGATTATGCCAATAGGAAGGTAATGTGTGCATTCTGCCTTCGTCGCTTCTGGTCTGCTGAGGATCTGCGCCGTCACATGCGCACGCACACCGGTGAGCGGCCGTTCTCCTGCGACATCTGCCGGCGCCGCTTCACGCTCAAACACAGCATGCTTCGACATCGCAAGAAGCACAATCCCCTGTCCATCCCGCAACCAGACGATGTCTCGATGGTGAGTGGCGACGAAGAAGGAAATCACTGTGGCATGATCGTGAATGTGCCAAGGCCCCCTCCTCCTTTGAACATATCTGTTGGTGCTGAAAAACTTCAGAAGTCACAGCTAAAACTTATAAATCACAATAACAACAACATCACACCAAATAATGGCCTTCCTTCGAATTTTACTTGGGACTCTAATAAGGTGGACTTCACAATCTCTGCGGCCCAGATTCTCAGCTCAAAGTTTGCCAGTGATAAGAAAGATGATGTCCTTGAACAAGACACTGGTTTGATTGAAAAGATGCTGGACATACAGGATAAGTCAATAATCGAGAAAGTGTTGCTATCGAAATCTCCAGAGGATGCTGCAAAACTGTTAGGTATGAAAAATGGAAGTCACGAATAG
Protein Sequence: MLGGGEGAGQIASLPLARARSLPPATSCAPQVKLPADVTAEARRATTVQQPPASSRSTPSRPVVAGYVRRTLVISSLIQWLVSRPREVHRGCATFTQSLTEFAEDTSDVSLTRPHSLGGPHKKRSAMQDMATLQQPFVTSPSPATAGAVQGVIEVGHVEKKGHLGSVLHTVSSMRGGRGSGAARALSSNERKLESSALAIGSGSEVQQETSRTYAETCEENEETVQSARHLDMDNDAASDSNNESRNEECGEAVVEKTDNPERETDDDDDDDDDDDDDDDDDDDDSGDARVPESGGGDYSASSYRCPICDVVLGSQHDFTLHIRSHNNDCGEAVATPLGTFVCRVCGKALSSSSSLDRHVLVHSGERPFRCCVCGVSFTTNGNMHRHMRTHGEDGPCPPGAKRRRLGSPSPGDVDKRKALDLSMDGDDAVRRKLKTPIQPKKTEQMQVQRVQCPVCCRVDFASLNVLEMHLEERHPEYKARCHLCNLIFKNHRALNLHRTMKHFGEEGDKAATVLGFRDLTFVDFSSEKFPIIAKTLCEQSLHRASSMFHRFQCERCVRAFPCGKALAIHRQSCDGIRGARHVDYESEEEHKQDDFLAHLDLQTKSASLSPPPDYMSKEDSFASDPYFNGERDIDGERDLANIQSILSLTSAETLLQELSVSPRPRSDITPPDSVTKSSDSCNGADDEQQDCFAAEFRRMKLKGEFPCRLCTAVFPNLRALKGHNRVHLTASSGLHRCNMCPFSNPDKAVVVRHMRTHNGDRPYECALCNYAFTTKANCERHLRNRHSKLSRDEVKNSIIYHPSEDPTNDPDGQIKALSAREEVKRSLVFSSHSNDGSTTEHREQQDCIKLPDEENSRPLTNFVPKKMLQTQNRSWETHEVATMTHFADDEEMQDSEDNQTVSDDSLLVNLTKNNNMIKNNFMFKRHSEDQRLFMKEQVRTSTPCTQFVKKDDCYEQHDEDDNDGYDMMEDEVDDDDDDDDDETNIPLDLSMDALDLSKKKPSSTVQFGVKDVIEAQPQDLSKKSLVHNTELTKITPVQPVFAPPHKPPVGTNSIPPTVSPAVYKCSLSPLGHSTSPMPKVELKGGNMYHGHALYLNNNGYFRAQPPFQIPYPMSPYNHNLFSENNMKDLAEMKERLQKELIRGLQLTSGGKLLDPVLMADRVQAFHGLAEMCGRAKPEIKIDYAESKVKIESAGNSVLPPTIDNKEGIVNNIPMTPPKLTVSPKPTVREKDSSASVKMVIKNGVLMPKQKQRRYRTERPFSCEFCSARFTLRSNMERHIKQQHPQCWSQRQRSGGALSRRGHTAALPHSQDSRSSLDSLGHVDLNVPSLDNEKQTKVEEAPKTALEMDLKQVNDVLPDTANNKINGNNNNNKPYISEEVKLAIAQQLKSKLNQPSANAVVKTEDEEEDDDGLVIDEEKEATGEEEVDHQRIGKEDGVVDLASVSRLLDNATTQNRAFQQYFPATQDGEEEGRGEGSEDDEEGLVAGSNSEGNNSGSDENRSESETHGNGSETKKKSAYSLAPNRVSCPYCNRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHAGHGNVANTSNTGLSTPTNTGNTTVSSNTSSSCGETSPPSTNGYTMRNVPDRPFKCNYCPSSTFSTNSNLRKHLSSKHYNSTSNGPLSPVAIARNSLSGDENHCVGAEDSNSEDVDDNELEIGTGRTLPLPEKDSYPQPELKSPLPVLDIVVPKIVAAFDNHSSGMSTSSSVSSSDLPFKCHLCEGSYAERQEALDHIRDHHPPEFELLMSKGALEATTGNDDSVHHVGAHDEGNTVGDENLEQLRGKFPDYANRKVMCAFCLRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHNPLSIPQPDDVSMVSGDEEGNHCGMIVNVPRPPPPLNISVGAEKLQKSQLKLINHNNNNITPNNGLPSNFTWDSNKVDFTISAAQILSSKFASDKKDDVLEQDTGLIEKMLDIQDKSIIEKVLLSKSPEDAAKLLGMKNGSHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -