Daus146736.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- -
- Assembly
- GCA_029891345.1
- Location
- CM057001.1:15724829-15735811[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 2.3e-05 0.02 18.8 1.5 1 23 280 302 280 302 0.96 2 28 0.18 1.5e+02 6.6 2.0 1 23 316 339 316 339 0.96 3 28 4.6 4e+03 2.1 2.2 2 23 346 368 345 368 0.90 4 28 0.075 65 7.7 0.1 1 20 397 416 397 418 0.91 5 28 0.055 48 8.1 0.0 1 23 513 535 513 535 0.95 6 28 0.00042 0.37 14.8 2.2 1 23 552 575 552 575 0.94 7 28 0.0028 2.4 12.2 0.1 1 23 629 652 629 652 0.96 8 28 0.0048 4.2 11.5 2.0 1 23 658 680 658 680 0.97 9 28 0.33 2.9e+02 5.7 0.4 1 23 689 711 689 711 0.93 10 28 0.046 41 8.4 1.2 1 23 768 791 768 791 0.96 11 28 6.2 5.4e+03 1.7 3.6 2 19 838 857 837 862 0.81 12 28 0.63 5.5e+02 4.8 0.1 2 23 871 893 871 893 0.93 13 28 0.46 4e+02 5.2 0.4 2 23 900 922 899 922 0.95 14 28 5.9e-05 0.052 17.5 4.2 1 23 929 951 929 951 0.97 15 28 0.1 88 7.3 0.3 3 23 989 1011 988 1011 0.93 16 28 0.002 1.8 12.6 2.7 1 23 1014 1037 1014 1037 0.97 17 28 0.43 3.7e+02 5.3 0.4 2 23 1044 1066 1043 1066 0.94 18 28 2 1.7e+03 3.3 1.3 2 21 1092 1111 1091 1112 0.91 19 28 0.011 9.2 10.4 2.8 2 23 1126 1148 1125 1148 0.95 20 28 0.032 28 8.9 0.1 1 23 1154 1178 1154 1178 0.98 21 28 0.26 2.3e+02 6.0 0.1 2 23 1186 1208 1186 1208 0.91 22 28 5.7 5e+03 1.8 1.0 2 23 1247 1269 1247 1269 0.92 23 28 0.002 1.7 12.7 0.0 2 23 1274 1295 1273 1295 0.94 24 28 0.0042 3.6 11.7 2.1 1 23 1354 1377 1354 1377 0.95 25 28 0.0041 3.6 11.7 5.7 1 23 1387 1411 1387 1411 0.91 26 28 0.99 8.7e+02 4.2 3.1 1 23 1490 1513 1490 1513 0.95 27 28 0.064 56 7.9 0.6 2 23 1520 1542 1519 1542 0.95 28 28 0.0017 1.5 12.9 0.2 2 20 1647 1665 1646 1667 0.93
Sequence Information
- Coding Sequence
- ATGCGACTGGAGTTTGAGCAGCTGAAGAGCCAACTACAGCACCTGCAGCAGCAGCGTGGTAAAGAGGAACTTGACCTCGAAGCGGAACACAATCTCAAGGAGGAACACGACCTCGACTTCATGCCGCACCTCGAACCCCAGGTAAGGCCCGCCTGCGTTCACTTGGTCCCCAAGGCTGGCAATCCGCACGATGCTGCACTCCAGTCTGATGTGGTGGACCCACCACCTTGCTTGCCTTGCCCTGGCTGGCAGGCACACACTCGCAATGCATCAGGGGAGGTTTCCCTCTGGCCAGTTCCAACCACAGCCGCCCCTCGCTCGTCACGTCTCTCGCGGGTATTTATTTCTATGCACGCCCTCCAGATGGGGCATGCCGCCCTCCGGGTGCCACTGAGGCAGGGGTGGAGAGAACCCTTCTCTGAGGCTCCTGAGACTTTGGGAGACCAAACATGTCGAGACATCATGACTCTCGCTCTACAAGCTGGTAACGTCAATTACTTGAGAGCTGTGGAGTTCTTAAATGGGAAACGCTGTGAACAcagaggggcagttgagGTGCCGCCTGCCGAGGTGTACTCTCACAGCCGCAGGTCATCCAATGAAGCAACCCGCCCCAGCCCTGTGTGCTCCCCGCCCTGCCTCGAGAGGAATGAGGACAGTGTTGGCAACTTGGCAGACTGCAAGCCGGTGTGTATTCCCTGCACGTGTTGCATGTGTGCATCTGTGTATGCGGCTCTGTGGGGCCTCCTTGCCAACCAGTGTGGTGCTTGCAGGAGAAGGAGCTGGTGGACTCTGACTCGAGCTCCCGAGAGACTGAGGCTGAACCGCTCACCAATGCATGCATGCAAGGTGTGCAGCAGGACATTTGTGTCGTGGAGCCAGCTGAACGTGCACTCTAGGAGCCATGCTAGTGATGCGGAGGGCCAGTCCGAGCCCCGGCAGCCCTTCACCTGCGACCTCTGCTGCAAGTCGTACGCACTGCCCAAGCACTTGTGGACGCACGTCAGTATGGCCCACCGGGGCGACCCGGCTATCACCTGCAACCTCTGCCAGCGCGTCTGCATGAGCCAGGCACGCCTTGATGAGCATAGGCATGCGTCCCACAGCCTGGAAGAGGCAGAACCTGAGCCACGTATGCACATGCAAGCAATGCTAAACATGCTGTTGAGCCAACGCGAGGCCTTGCAGCATGCCTGTGCTTCCTGTGAGCAAGTCTTCGCCAGCGAGGTGGAACTAAAGCGGCACGTGACCTCTCAGCAGTGTATGGTGGTGAGGAAGCAGCTTGCAGAGATGAGTCTCCTAAAGCAGACGCTGCTCAATTCAAGACGGGACTCGGCCGAGATGAGGGTCAGGAAGCGTTCTCTCTCGAGTGACTTCCTTGAGGAGCTGTGCCTGGAACCATCAACGAGGAAGAAGCAGGTGAGTGCCACAGACCAGAATGGCCACTCAGGAAATCGCAGGAAGAACTCCAGACCCAGAAAGATTGCCCGCGATCGGACTGTGAATATTTGTGAAGAAGCACATTGTGAAGAACAGTTCACATGCGACGTGTGTTTGGTGGTTTTCCAGACATCTGGTGAGCTTGCTGACCATAAAGTAATTCATGAAAGTGTTGAGGAGGTAGGGGATGCTGGCACGTGTAGCGACAAACCTTTTACATGTCTTCTGTGTGATAAAAGCTTCTCTGTGCGCCAGTCCCTCAGTCGACACTTGCTAGCCTGCCATGGAATTGACCCCCAGGAGGTAACGAACACATTAAAGAAACAGATAGTTTCAAATGCAAGCACAGATGTCAGGAAACCTAATATTTCATGCACAGATGACACTGCTGCGGTTACAATGGGGAGCATGGAATTTGCAGATGATCAGTCGAACAAGAACTTCTATTCTTGTGAGGTTTGcattcgggagttcaatgacaGATCTAGTTTGTGGCTGCACATGTTGTATGCCCACAAAGAGCAAGCAATGTATGCATGTGGCATTTGCCTGAAGGTGTGCATGAACAACAGTCATCTGATGACTCACTGGAAGGAGCATGGGAATGTGGTGGAACAGCGGCGCTATGTCTGCCAGATCTGTGGTCGCCAGCATGACACTAGGAAGAAGCTGGTCATCCACGTAGGGGTGCATTGCCTTGACAATGGTCAAGGAGGCACATATGACCCGGAGGCTATTGTGCTGCAGAACCATGCATTCTACAACCCAGAACAGAAGGCAAAGGATGCAGAAGGTGGTGTAGATGGAAACAGCCCTGAGTGCAAGCCAGAAGTCCAGACGAGCAGGGAGGCTGCGAATGACTTCACCTGCGAGGTATGCTACAAGGTGTTCTTGTCAGAGGAGAAGCTGGTGAAGCACAAGAAGAACTCTCACAAGGAGGAGACCTCCAGCAACACGTACCGAGGCACGTACCAGCTGTTCTTTGTGTGTGAGCTGTGTGGGTCGTCCCATCACAGTAAATCTGAGCGCTGGCGACACGTCTACAAGTGCCATGGAGGAGAGGCAATACTGAGATGTGACCGTGGTTCGTGTGGAAAGGTATTCACTACCCGTGCCTTGCGTCATGAGCACTGTACCAATCATCACCAGCTCCAAGGTGACATCCCGAACACCTGCGAGGTGTGTGGGAAGCTTTGGGGCTCCCGCGTTGACTTCTGGAAGCACATGATGGGCGTCCATTCCGACCTTGTCCCCCTGACTTGCGGAGTTTGCCTAAAGATTCTTTGTGATGTCCCGGAACTCAAGGCCCACGTTAAGAAGAAACACAGCCCATTGATGGGTGATTTCTGCTGTGAAATTTGTGGTCGGTCGTATTCCAACAAGTCCAAAATGTCTAGGCACCGCAAAATTCATGAAGTATCAGAAAATAGCGAACATCTTGAGAAGAGTGTAATGTCAATTAAGAAACCATCAAAGTTGATTACTGGTAAGAATGAGAGTAAACCATGTTTGCCTAAGTTATTGTGTGATATGTGCCCTGAACAGCAGTTTACCAGTCTTTCACAGCTCGCTCAGCATCGACGCAACGTCCACTCCTTATTCCCATGTGACATTTGCACCAAGTTTTATGGCCGCACCACACATCTTCTGAACCACGTTAGAAGAAAACACAAAGATGAACCACAACTCTCTTGCCCTGTCTGTTCCAAACTATGTAGCAGTAAAGTAGGAGTCTCATTACACATTGCCAAGAATCATGCCCCGAAAGAGGAAGAAGTGAAACTTAAAAAGAAGTTTCCAACTTTCAAGACTTCTAAAGGTACGTATGGgcagaagtgctcattttgctcAAAGACTTTCTGGAAACGCTTAGTTTATCGTAAGCACATGAGGGGTTGCAGAAACAAGGTGGTAGTGGATAGTTCTTCGATTCAGAAATGTGAGTTATGCAACGTTACGTGCTCATCAAAGACTAAGCTTCTGCAGCACATCCGAGACCAGCACCCAGACCACCCGAACTTCACTTGCAACATTGTGGACTGCTCTCGTGTCATGCGCTCACTTGCTGAACTGGAGTTGCATTTAAAGATGCACACTGCAGATGTGGGGATGGCGACTTGTGATGTCTGCGGTGAAGTGTACGATAGTGAGATAAAGATCTGGAGGCACCTGTACAACAGCCACAGGCCGCGGGAGCTGGAGGGACTATGTGGCATATGTCTGCGGGCCTTACAGACAGTGGAGGAACTGAGGGCCCACGTGGAGGCAACTCATCCGGGGGCCTGCGAAAAGCCCAACACCTGTAAGTTGTGTGCCCGCACATACACTGGTGCTTACAAGGTTCTACTGCATGTTGCCAAGTGCCATTCCTCCTACTCTGTGTGCAAGGTCTGCCTGGAGATGTTCACCGACCCCTCGCAGCTGGCAGCACATGCAGAGCTTCACCAAGATGAGAATAATCATGATGATGATGTAGATGATGCTGCTGCTGAAGACTCACAAGAGAACAGCAAAGCTGAGCAGGAAGCAGAAGAGCAGTCGATGGTGGCCGTTCCAGAGAAGAGGCAGTTGTTGGAGTCTGATGAAGTGAAGACAGCAGGGAAAAGACCAAAACGCTCATATGATTGTGAATTATGCACCAGGAGCTTCCACTCCCCGTCTGCGTTATCGGACCACAAGAAACAGTTCCATGTGGCGACACCTAACGAGTTCAAGCCATATCACTGCAACACATGTTTCAAGCACTTCTCCAACAAGACCAGCTACTGGAAACACATCAACTCACCATCACATGCAAGCACGAGACGAATGACCGTGGGGACCACAAATCATGGAGTGCAGAAGCAGAATGAACTGGTCGAGAGCCAAGAGGACAGCAGAGCATCATATGCTGGCAGTGAAAGTTTCGATTCGAGTCACAGTCTGCAGGGAGAAGAGAACTTTGATCAGGAAAGCACGCACAGCCCCTCACGCCGTAGATCAGAGACACGAAAGGTCTATTCAGTGGATGCAGCAGTTGCAGGGCCGTACTTTTGTTGTCTCTGTGGCAAGAAGTGGCCAGGTCGCAAACACCTGTGGCAGCACCTGATACGCAACCACCGGAATGAGGCGGCAGTCACATGTGGAGTCTGCCTTACAGTGTGCTCTGATTACCGTGACCTGTCCCGCCATCTGTCAGTCCAGCACCCAGACAATTTTAAGGGTGATGGAAACAACTTCACATGCCGGACATGCGGTCGCTACCACAATGCCCGCTGCAAGCTTCTCCAACATGTTCTTATCCACATTGTGCTGGGGCCAGGACCTGAGAAACAGCCCCCTTCGCTGACAGAGATAATAGAGTCTCGAGGGATAAAAGATGAAGGGAGCCCATGCGAGATGTCGCCACAGATGTTTGGTGACCAGGCATTGGCATCACATGAGCAAGTGGAGGTGCTGGCAGTCTTAGATGAGTCCGGTGCAGAGAACCCAGACTTTCTGGCAGCAGACATTGAGTTGAGCTGCCAGCACTGTGACATGTCGTTTGACTCGTTAGAGGAGCTTCTGAAGCATCAAGACGTCTGCCAGGAAGGTATGTTATCGGTGGTTAATGGAGGGCAGTCAAAGGAACCACAGTCTCTTGGTGGTGATGGAGATCTTTTGGAGGAATCGCAGGATTCCTCCTCGCAGAGCAGCTTGGACAACGTTGGCAGCCCGTTTGACTCCTGCGCCAATGATTATGTTGTTAGAAACAGCATCACCAACAATGATGATGATGTTTTACCAGCAAACATAGACAGTGAAGTTTTTGGTGATGGCACAGCGCTGCAGCAAGAGTTACAGTTGAACGACTCAGCTTTAGACTGCATTGATTCTGGGAGCTGTGAAAATGTCCCTCGACGCGATGTTGAAACTACAGAAAAGAGTGATGGGAGTCCAATAGGGGACGGCTTGCCTATAGGAAAGAAAGAAGATTCATCAGGGAGGGAAGAAGGAAAGAAAGGTATCTTCATGGATTCACAAAGCACAAAGATGCATGCATATGAAGTGGGTGCTGCTGTGGAAGTTACCTTTGAAAGTGACTGTAGAGATGATGAACGGTGTCACATGGTGAGCAATGGTCTTGCAGACAGTGAAGGGAGCTCTGTTGAAACTGCAATTTGTGAACTTGAGCCGCCCAGAAGGGCTGGCGAGAAGGTTTTGTTGCACCAGGGCAACGTCGCCAACGTGTCAATGGATAATCTAAACTCGCTCGACATGCTGAGCATGATAGAGTCTGTGGACATGTGA
- Protein Sequence
- MRLEFEQLKSQLQHLQQQRGKEELDLEAEHNLKEEHDLDFMPHLEPQVRPACVHLVPKAGNPHDAALQSDVVDPPPCLPCPGWQAHTRNASGEVSLWPVPTTAAPRSSRLSRVFISMHALQMGHAALRVPLRQGWREPFSEAPETLGDQTCRDIMTLALQAGNVNYLRAVEFLNGKRCEHRGAVEVPPAEVYSHSRRSSNEATRPSPVCSPPCLERNEDSVGNLADCKPVCIPCTCCMCASVYAALWGLLANQCGACRRRSWWTLTRAPERLRLNRSPMHACKVCSRTFVSWSQLNVHSRSHASDAEGQSEPRQPFTCDLCCKSYALPKHLWTHVSMAHRGDPAITCNLCQRVCMSQARLDEHRHASHSLEEAEPEPRMHMQAMLNMLLSQREALQHACASCEQVFASEVELKRHVTSQQCMVVRKQLAEMSLLKQTLLNSRRDSAEMRVRKRSLSSDFLEELCLEPSTRKKQVSATDQNGHSGNRRKNSRPRKIARDRTVNICEEAHCEEQFTCDVCLVVFQTSGELADHKVIHESVEEVGDAGTCSDKPFTCLLCDKSFSVRQSLSRHLLACHGIDPQEVTNTLKKQIVSNASTDVRKPNISCTDDTAAVTMGSMEFADDQSNKNFYSCEVCIREFNDRSSLWLHMLYAHKEQAMYACGICLKVCMNNSHLMTHWKEHGNVVEQRRYVCQICGRQHDTRKKLVIHVGVHCLDNGQGGTYDPEAIVLQNHAFYNPEQKAKDAEGGVDGNSPECKPEVQTSREAANDFTCEVCYKVFLSEEKLVKHKKNSHKEETSSNTYRGTYQLFFVCELCGSSHHSKSERWRHVYKCHGGEAILRCDRGSCGKVFTTRALRHEHCTNHHQLQGDIPNTCEVCGKLWGSRVDFWKHMMGVHSDLVPLTCGVCLKILCDVPELKAHVKKKHSPLMGDFCCEICGRSYSNKSKMSRHRKIHEVSENSEHLEKSVMSIKKPSKLITGKNESKPCLPKLLCDMCPEQQFTSLSQLAQHRRNVHSLFPCDICTKFYGRTTHLLNHVRRKHKDEPQLSCPVCSKLCSSKVGVSLHIAKNHAPKEEEVKLKKKFPTFKTSKGTYGQKCSFCSKTFWKRLVYRKHMRGCRNKVVVDSSSIQKCELCNVTCSSKTKLLQHIRDQHPDHPNFTCNIVDCSRVMRSLAELELHLKMHTADVGMATCDVCGEVYDSEIKIWRHLYNSHRPRELEGLCGICLRALQTVEELRAHVEATHPGACEKPNTCKLCARTYTGAYKVLLHVAKCHSSYSVCKVCLEMFTDPSQLAAHAELHQDENNHDDDVDDAAAEDSQENSKAEQEAEEQSMVAVPEKRQLLESDEVKTAGKRPKRSYDCELCTRSFHSPSALSDHKKQFHVATPNEFKPYHCNTCFKHFSNKTSYWKHINSPSHASTRRMTVGTTNHGVQKQNELVESQEDSRASYAGSESFDSSHSLQGEENFDQESTHSPSRRRSETRKVYSVDAAVAGPYFCCLCGKKWPGRKHLWQHLIRNHRNEAAVTCGVCLTVCSDYRDLSRHLSVQHPDNFKGDGNNFTCRTCGRYHNARCKLLQHVLIHIVLGPGPEKQPPSLTEIIESRGIKDEGSPCEMSPQMFGDQALASHEQVEVLAVLDESGAENPDFLAADIELSCQHCDMSFDSLEELLKHQDVCQEGMLSVVNGGQSKEPQSLGGDGDLLEESQDSSSQSSLDNVGSPFDSCANDYVVRNSITNNDDDVLPANIDSEVFGDGTALQQELQLNDSALDCIDSGSCENVPRRDVETTEKSDGSPIGDGLPIGKKEDSSGREEGKKGIFMDSQSTKMHAYEVGAAVEVTFESDCRDDERCHMVSNGLADSEGSSVETAICELEPPRRAGEKVLLHQGNVANVSMDNLNSLDMLSMIESVDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -