Basic Information

Insect: Dryococelus australis
Gene Symbol: -
Assembly: GCA_029891345.1
Location: CM057007.1:28422168-28425097[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.1 89 7.3 3.0 1 19 186 204 186 208 0.93

2 14 0.24 2.1e+02 6.1 0.2 2 19 219 236 218 239 0.88

3 14 0.00063 0.55 14.2 0.9 1 23 242 264 242 264 0.93

4 14 0.0084 7.3 10.7 1.4 2 23 271 293 271 293 0.96

5 14 0.00036 0.31 15.0 4.5 1 23 299 321 299 321 0.97

6 14 0.042 37 8.5 2.3 1 23 327 349 327 349 0.98

7 14 0.00014 0.12 16.3 6.8 1 23 355 377 355 377 0.98

8 14 3.8e-06 0.0033 21.3 0.8 1 23 431 453 431 453 0.99

9 14 8e-06 0.007 20.2 1.6 1 23 459 481 459 481 0.99

10 14 3.8e-05 0.034 18.1 1.9 3 23 489 509 487 509 0.97

11 14 0.0033 2.9 12.0 0.4 1 23 515 537 515 537 0.97

12 14 0.0002 0.18 15.8 2.5 1 20 543 562 543 565 0.94

13 14 3.3e-08 2.8e-05 27.7 0.4 1 23 571 593 571 593 0.99

14 14 1.9e-05 0.016 19.1 4.2 1 23 599 621 599 621 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.1	89	7.3	3.0	1	19	186	204	186	208	0.93
2	14	0.24	2.1e+02	6.1	0.2	2	19	219	236	218	239	0.88
3	14	0.00063	0.55	14.2	0.9	1	23	242	264	242	264	0.93
4	14	0.0084	7.3	10.7	1.4	2	23	271	293	271	293	0.96
5	14	0.00036	0.31	15.0	4.5	1	23	299	321	299	321	0.97
6	14	0.042	37	8.5	2.3	1	23	327	349	327	349	0.98
7	14	0.00014	0.12	16.3	6.8	1	23	355	377	355	377	0.98
8	14	3.8e-06	0.0033	21.3	0.8	1	23	431	453	431	453	0.99
9	14	8e-06	0.007	20.2	1.6	1	23	459	481	459	481	0.99
10	14	3.8e-05	0.034	18.1	1.9	3	23	489	509	487	509	0.97
11	14	0.0033	2.9	12.0	0.4	1	23	515	537	515	537	0.97
12	14	0.0002	0.18	15.8	2.5	1	20	543	562	543	565	0.94
13	14	3.3e-08	2.8e-05	27.7	0.4	1	23	571	593	571	593	0.99
14	14	1.9e-05	0.016	19.1	4.2	1	23	599	621	599	621	0.97

Sequence Information

Coding Sequence: ATGCTGTTACTTGCGGCTGGAGGTTCTTTGGGGCAGATCAGGTGGCAAACATCCTGTTGTAACATCATCATTGGGACAGTACAGGTACATCATTTCCAACACCCACCTCTATCTAGATATCCATCTACTGCGTTCCAGTCTGCCCTCAACATGCATCTCTACGGGAAGAGAATGATAATAGGGTCAGAATTGTTTGGTGATCCAGAGTTACCAAAGGATGATGACACAATTGGAAAGATAAGTGTTGTTGATGTCACGAAGTACAACTGTCCATTGTGCTGCTCTGGACTCATGCTGGTGGACTCAAACCCACTTGAAGACACTACATGCAGTTTTGCCACTGACAAGCCCATTGTGAAAGTGGTTAGTTTGCAGATGTTAACTACAACAGACTCCAATGATTGTAATTGCGATGAGAAGCAAGAGGAGCATGCGGTGCAGCCTACCAGCAATGGGAATGAAGCTTCATCAGCCACGTGCAGAATATGTGCAGATATTTTCAAAAGCTTGGAAGACTGCTTGGTCCATGCTAAGGTTCATTCTGTGGACGATTTATTCCCATGTAGCATATGTGACCTGTGTTTCTCCATTGAGTCAAGCTTTCTGAGTCACTGTGTTGAGCATCGCCTGGCATCTGCAGCCCCTGAGAAACTGCCATGTCCAACATGTGGTGACGTGTTCAGTGATTCGAGGTCAATGGCAGGTCATTCCTGCCGGCGAAAGTTCCGCTGCCCGGACTGCAGCAAGACATTCAGTTCGGAGGCACGTCTGGCATTCCACCAGCAGCAGCACGGGGAGCCGGACACTGCAACGTGTCAGCAATGCAGCAAGGTATTTGCTTGTGAGAGCAACCTGTTTGAGCATGTGCGGTTGGTGCACCTAGGAGAGAAGGTCCACTGTTGCCCTCGGTGTGGCAAGGCATTCCAGCTACGCACACGGCTCAAGGCGCACATGCGTAGCCACTCTGGGGAGCGGCCATTCAAGTGCTGCTTGTGCAGGGGCAGGTTCTACGACAATGCCACACTCAAGGGCCACCTTGTCACACACTTGAATGTCAAGCCCTTCCAGTGCGACAAGTGTGGCCGCTGTTTCTCCAGGAAAACTGTCTTCAAACATCATGTTCTCTCACATGACAAAGATGTGAAACCTCCACTGACCAAAAACTACAAATGCAAGCTGTGCCCTGATGTAGCGCATGTATCGCATTCAAAACTTGTGGAACACAGGAAGGAAACACATCCTACAGATGAATTTATAGATGATGAAGAACAGCCAGCCATTTCCAAGCCATTCACATGTGACTATTGTGAAAAGTCATTTGCTTATCGGGCGACATTGGTGTCCCATGAGCGGACACACACCGGTGAGTTGCCATTTCAGTGCGAGTTTTGCGAGAAGAAATTCCCTCAGAAGCGCTCGCTTATCTTACATAGACGCATCCACACAGGGGAGAAGCCTTATGGGTGTGCAACGTGCGGCAAGCACTTTATCCAGAGTGCCCACTTGTATGCCCACCAGCGCCTCCACACAGGAGAAAAGCCATACGTATGTGAGGTGTGTGGGGAAAAGTTCCGCCTGAAGGATGTGCGGGATGCCCACCGACGTAAGCACACCGGTGAGCGGCCATTCAAATGCTCTGTCTGCGAGAAAGCGTTCCGTACATCGCACTCCTACTACCAACACATGTGGATACATCAGGGCAAGAAGCCGTATGTGTGTCAGTATTGTGGGAAGGCTTTCCGGCGCTCCAATGGACTGAAGATACACATACGCATTCACACTGGTGAGAAACCACACGTGTGTGATGTCTGTGGCAAGTGCTTTGCACAGAAGCAAGACATGAAGAAACACAGGAATCTTCACACAAATGGAAGGCTGTAG
Protein Sequence: MLLLAAGGSLGQIRWQTSCCNIIIGTVQVHHFQHPPLSRYPSTAFQSALNMHLYGKRMIIGSELFGDPELPKDDDTIGKISVVDVTKYNCPLCCSGLMLVDSNPLEDTTCSFATDKPIVKVVSLQMLTTTDSNDCNCDEKQEEHAVQPTSNGNEASSATCRICADIFKSLEDCLVHAKVHSVDDLFPCSICDLCFSIESSFLSHCVEHRLASAAPEKLPCPTCGDVFSDSRSMAGHSCRRKFRCPDCSKTFSSEARLAFHQQQHGEPDTATCQQCSKVFACESNLFEHVRLVHLGEKVHCCPRCGKAFQLRTRLKAHMRSHSGERPFKCCLCRGRFYDNATLKGHLVTHLNVKPFQCDKCGRCFSRKTVFKHHVLSHDKDVKPPLTKNYKCKLCPDVAHVSHSKLVEHRKETHPTDEFIDDEEQPAISKPFTCDYCEKSFAYRATLVSHERTHTGELPFQCEFCEKKFPQKRSLILHRRIHTGEKPYGCATCGKHFIQSAHLYAHQRLHTGEKPYVCEVCGEKFRLKDVRDAHRRKHTGERPFKCSVCEKAFRTSHSYYQHMWIHQGKKPYVCQYCGKAFRRSNGLKIHIRIHTGEKPHVCDVCGKCFAQKQDMKKHRNLHTNGRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -