Basic Information

Transcription Factor Domain

TF Family: CG-1
Domain: CG-1 domain
PFAM: PF03859
TF Group: Unclassified Structure
Description: CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.019 2.1e+03 2.0 0.0 89 105 14 30 6 43 0.75

2 7 0.0047 5.2e+02 3.9 0.0 88 105 51 68 37 82 0.80

3 7 0.0049 5.5e+02 3.8 0.0 88 105 89 106 76 118 0.79

4 7 0.022 2.5e+03 1.7 0.0 89 105 128 144 114 155 0.79

5 7 0.0055 6.2e+02 3.7 0.0 89 105 166 182 156 192 0.78

6 7 0.0054 6e+02 3.7 0.0 88 105 203 220 191 229 0.79

7 7 0.014 1.6e+03 2.4 0.0 89 105 242 258 233 263 0.78

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.019	2.1e+03	2.0	89	105	14	30	6	43	0.75
2	7	0.0047	5.2e+02	3.9	88	105	51	68	37	82	0.80
3	7	0.0049	5.5e+02	3.8	88	105	89	106	76	118	0.79
4	7	0.022	2.5e+03	1.7	89	105	128	144	114	155	0.79
5	7	0.0055	6.2e+02	3.7	89	105	166	182	156	192	0.78
6	7	0.0054	6e+02	3.7	88	105	203	220	191	229	0.79
7	7	0.014	1.6e+03	2.4	89	105	242	258	233	263	0.78

Coding Sequence: ATGGCAATTTTTGAGCAAGTGTGTGACACATGCGCAGACAACTCAACAGGTCACGTCGACAGACGCAGCTATGCGATGATAAACCAAGCGACATGTTCAACTTCGATAGTTGTTATGGGAATTTTTGAGCAAGTGTGTGACACATGCGCAGACAACTCAACAGGTCACGTCAACAGACGCAGCTATGCGATGATAGACCAAGCGACATGTTCAACTTCGACAGTTGTTATGGCAATTTTTGAGCAAGTGTGCGACACATGCGCAGACAACTCAACAGGTCACGTCAACAGACGCAGCTATGCGATGATAGACCAAGCGACATGTTCAACTTCGACAGTTGTTATGGCAATTTTTGAGCAAGTGTGTGACACATGCGCAGACAACTCAACAGGTCACGTCGACAGACGCAGCTATGCAATGATAAACCAAGCGACATGTTCAACTTCGACAGTTGTTATGGCAATTTTTGAGCAAGTGTGCGACACATGCGCAGACAACTCAACAGGTCACGTCAACAGACGCAGCTATGCAATGATAGACCAAGCGACATGTTCAACTTCGACAGTTGTTATGGCAATTTTTGAGCAAGTGTGCGACACATGCGCAGACAACTCAACAGGTCACGTCAACAGACGCAGCTATGCAATGATAGACCAAGCGACATGTTCAACTTCGACAGTTGTTATGGCAATTTTTGAGCAAGCGTGCGACACATGCGCAGACAACTCAACAGGTCACGTCGACAGACGCAGCTATGCAATGATAGACCAAGCGACATGTTCTAGAGCCATTAAGTAA
Protein Sequence: MAIFEQVCDTCADNSTGHVDRRSYAMINQATCSTSIVVMGIFEQVCDTCADNSTGHVNRRSYAMIDQATCSTSTVVMAIFEQVCDTCADNSTGHVNRRSYAMIDQATCSTSTVVMAIFEQVCDTCADNSTGHVDRRSYAMINQATCSTSTVVMAIFEQVCDTCADNSTGHVNRRSYAMIDQATCSTSTVVMAIFEQVCDTCADNSTGHVNRRSYAMIDQATCSTSTVVMAIFEQACDTCADNSTGHVDRRSYAMIDQATCSRAIK

Sequence clustering based on sequence similarity using MMseqs2