Basic Information

Gene Symbol
CDC5L
Assembly
GCA_029891345.1
Location
CM057004.1:77827809-77851289[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-10 2.5e-06 31.0 2.4 18 46 2 31 1 31 0.96
2 2 3.5e-12 6e-08 36.2 0.1 1 45 37 80 37 81 0.93

Sequence Information

Coding Sequence
ATGAAATATGGGAAGAACCAGTGGTCGCGTATTGCATCTCTGCTGCATCGCAAGTCCGCAAAGCAGTGCAAGGCTCGGTGGTATGAGTGGCTGGACCCAAGCATCAAGAAGACCGAGTGGAGCCGGGAAGAAGATGAGAAGTTGCTGCACCTCGCCAAACTTATGCCAACCCAATGGCGCACCATCGCACCCATCATTGGTCGCACGGCTGCTCAGTGTTTGGAACGCTACGAGTACTTGCTCCCTGGTGCACTTGACTGGAGCATGGGGTGTACGTGTTGGGTGCTAGGGTTTACTACGGGCGTGGATCCGCTAGCTATAGTTGAAGTGCAAGTGGACCCACGCCAAACAGGATCTCCTCTACCACTGGATGGTATTCTTCGGCTACgcggTGATCAAGCACAGAAGAAAGAAGAAGGCGAAGATGCAGCAGATGATCCTCGTAAGTTGAAGCCTGGTGAAATAGACCCAAACCCGGAGACAAAACCTGCTCGTCCAGATCCTAAAGACATGGATGAAGATGAATTGGAAATGCTGTCTGAAGCTCGAGCTAGATTGGCAAACACACAAGGAAAGAAAGCTAAACGCAAGGCAAGAGAGAAACAGCTGGAAGAAGCTAGAAGATTGGCAGCTTTGCAGAAACGTCGTGAACTGCGTGCTGCTGGTATCGAGTTGGCGCCACGCAAGAAGAAGAAGCGAGGTGTGGACTACAATGCTGAGGTCCCTTTCGAGAAGCGACCTGCGCCAGGTTTCTACGACACCAGCCAAGAGGAAGTGGACCCGCTTGCACCTGACTTTGCACGTCTGAGGCAGCAGCACCTGGATGGTGAACTGCGTACTGAGAAGGAGGAGAGGGAGCGTCGTAAAGACAAGCAGAAGTTGAAACAGCGGAAGGAGAATGATATTCCTGTGGCAATGTTGCAAAACCAAGAACCAGCCAAGAAGAGAAGCAAGCTCGTGCTGCCTCGCCCACAAATTTCTGATGAGCAATGGAGGCTAAGCAAACAACCCTTAGCTCTGGCCATGAACAAGGGACCGACCACCCCCCATCATGCAGCCCTGGCAAGGGCCCAGTCAGCGGTATATGTATCTGCACATGACCGAAGATCACCAGTTGTTCGCAGGCTCTTGTTAGAGCCACCtgcagctcgctccaccatctCGTGTGCTGGAACTCTTTGTCCGCTCTTTGTTGCCCAGACAACCCAGAAACTCTTCAGGTCCATCGCCTGCATCAACCAGACGTGCCAGAAGATCTCGCCCAGCCCAACTATGAAGTCGTCAACCGTCCCTAGCAGATTGCCCCTGGTTAACGGCTACCCCTACAACCCTACAGAAAGTGGGCTGCCTATGCAGCGTATACCGCGACACTCTTCCGGCTTTGGAAAGCCAAAGACAACCTGCTTAGGGCAGAGTCCCTCAACCGTGCCGGCAGTAGTGGTGCAACCGTTGACAACGCTGTCCAGCTCTGGAGGAAGTAATACCCGGAAAACCCTAGACTCCATCAGCCGCCTACCATCTGCAGTGAAGGTTCGACACCAGGAGAGGTCTCCACCATCTCCAAACTCCCTTGCAGCATCTAAGGCATTGACCACTGCCAAGGTTCCAGCTGTCGTCAGCTCCTCCTTTATTCCCCTTTCCTACCTAACCTCAGACCTTCCTGAATCCTACACTGCCATAACCCGCAAGCTTCAACAACCAGTGGCAGCACCAGCCTGCCGCAACCAGAGTCAGCCGCTGTCATACAGCCGGCCACCCAGCAGAGGGATGATGAGGGTACCTGTGCCCCCCTGCATTTGTGTAGTGTACCACTCTTGCTGTTGCAAACAGGAACTGGAGCAAGTCGTGAAACTGGGACGAGCGAGTGAGGCGGCCAGAGAAGTAGCTACAGAAGGGGGACAACAGCCGTCAGATGCCCTGCTAGCCGACTACACCCTGACACCAGCAGGATCCACTCGCACCCCTCGTACCCCTGCCCCCACCACCGACCGCATCCTGCAGGAGGCACAGAACATGATGGCGCTCACGCATGTTGACACACCTCTGAAAGGGGGCCTCAACACGCCCTTGCACAATTCTGATTTTAGTGGTGTGACGCCCCAACGAGAAGTTGTGCAGACCCCCAACACAGTTCTTGCCACACCATTCAGGAGTGCACGCAATGAAGTGCGTACGCCTGGCTCGCAGACCAGTTTCAATACCCCTGTGCAAGACATTGTGCTCCATGGCAGTGTGAGGGGCCAAGCTCCAACACCTGTCAGAGACAAGCTCAGCATCAACCCTGAGGAAGGCATGGACACCCCTCAGTCCTTCTCTCACTACCAGAGACAGGTGAAGGAGCAACTACGGCAGGGCTTGAGCATGCTGCCTGCCCCACGTAATGACTATGAGATAGTGGTGCCCCAGGAAGACGAGGACATGGAGCTGCCGCCAGAGCAGGGCCAGCTGCTAGAAGACCAGGCAGATGTGGATGCCCGTCGACTACAGGAGATAAAGGCTAGAAAACCACATGGAGTGTCTGCCGACCTACCGGACACCCTATCGCAGTGCTCGGCGCCAAAACGCGGTGAACACCAGGAGTCAGGTCTCATTGACAGCAGTCCCTGCATGTTGGTGTATGCCTGA
Protein Sequence
MKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLPGALDWSMGCTCWVLGFTTGVDPLAIVEVQVDPRQTGSPLPLDGILRLRGDQAQKKEEGEDAADDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIELAPRKKKKRGVDYNAEVPFEKRPAPGFYDTSQEEVDPLAPDFARLRQQHLDGELRTEKEERERRKDKQKLKQRKENDIPVAMLQNQEPAKKRSKLVLPRPQISDEQWRLSKQPLALAMNKGPTTPHHAALARAQSAVYVSAHDRRSPVVRRLLLEPPAARSTISCAGTLCPLFVAQTTQKLFRSIACINQTCQKISPSPTMKSSTVPSRLPLVNGYPYNPTESGLPMQRIPRHSSGFGKPKTTCLGQSPSTVPAVVVQPLTTLSSSGGSNTRKTLDSISRLPSAVKVRHQERSPPSPNSLAASKALTTAKVPAVVSSSFIPLSYLTSDLPESYTAITRKLQQPVAAPACRNQSQPLSYSRPPSRGMMRVPVPPCICVVYHSCCCKQELEQVVKLGRASEAAREVATEGGQQPSDALLADYTLTPAGSTRTPRTPAPTTDRILQEAQNMMALTHVDTPLKGGLNTPLHNSDFSGVTPQREVVQTPNTVLATPFRSARNEVRTPGSQTSFNTPVQDIVLHGSVRGQAPTPVRDKLSINPEEGMDTPQSFSHYQRQVKEQLRQGLSMLPAPRNDYEIVVPQEDEDMELPPEQGQLLEDQADVDARRLQEIKARKPHGVSADLPDTLSQCSAPKRGEHQESGLIDSSPCMLVYA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-