Daus174779.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- -
- Assembly
- GCA_029891345.1
- Location
- CM057004.1:56599404-56604200[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2 4e+04 -2.1 0.2 35 43 3 11 2 12 0.78 2 2 2.2e-09 9.6e-06 28.7 0.0 2 37 16 50 15 57 0.91
Sequence Information
- Coding Sequence
- atGGCAAGACACTACAAGCGGAAGACGCAGCGACAGAGCTGGAACGAGGACAACATGAAGAAAGCCCTTGAAGCTGTAACATCTGGTATGGGTAAGAAGACAGCTGCACGACAATTTAGTGTTCCTGTAATGACTCTGAAAAGGAGGACCTTTGGCGGGGAGAAGACTACGATCGCGCTGTCCTCAGCCTCGGCGGAGGTCACGGCTGCGCGCATGCCTCACTTGCGGCGCTGCCAGCGACGTCGCGACCTTGCCTCGCCTCCGTACACGTTCGAAAGTTTTGAGCAGGTATGCCGGCCGGCCACGGTCAAGGCCTCCGGCATAGCTAAGAATGTCTGTGTCGACAGTAAGTTCGTTGACGCCTGGATGCGTGGCAGCCTACACTAG
- Protein Sequence
- MARHYKRKTQRQSWNEDNMKKALEAVTSGMGKKTAARQFSVPVMTLKRRTFGGEKTTIALSSASAEVTAARMPHLRRCQRRRDLASPPYTFESFEQVCRPATVKASGIAKNVCVDSKFVDAWMRGSLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -