Daus039893.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- -
- Assembly
- GCA_029891345.1
- Location
- CM056994.1:194407453-194433320[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-09 7e-06 29.2 0.1 2 38 19 55 18 62 0.83 2 2 5.9 2.5e+04 -1.4 0.1 29 40 609 620 609 621 0.86
Sequence Information
- Coding Sequence
- ATGCCGTGCGTGTACAAGAGGAAGCAAGGTGCACCTCTGCGAGGAATATGGACAGAGGAGGCTTCATCAGAGGCTATTAGAAGATACAAAGCCGGCGATATCGGACTGAGAGAGGCTGCTAGATATTATGGAGTACCTACCAGGACTCTTGTAAGGAGAATTGCATCTGGCAACAATTTCAAGCGTGGCCTTGGGCCAGAAGGTGTCCTGCATCGAGCTTATGAGAAACTATTAGTGGCTCATATTCAGCATTTAGTCACAACAGGCTTTTCTCCTGTTGTTCAGACAGTTCATCGCCTTGCTTATCAGTCTGCCGAGAACCTTGGGTTTAAATTCAAATTCTCCCACACCACTAAAAAAAGCACGTTACCCCGTGCTCCCCTGTCGACGGCTGGTATCGATGACAAGGAGATTGCAGGTATTCAGCGGTACTCGAGTCACCATCCCCCAAACGGCTGCATCATCCTACGATGTTGGCGGGAAAACTTTTTAGTTCCTGGCTGGACGATCATGCATCTCGTCACATGTGCTGAGTACTCACGGCGGATGGCCTTGAACTTCGCTTTTGCAAGGGGCACGCAAAGTGTCTTGTTCGCGATTCGCGTCTGCGCACACGACGTGCGGACCATCCCGTCAGCCTTTCTTGAGATGATGCATCGCCTTGCGGACACCTGGATCGGCATTCCTCCGACCGTCTTTGTCCCTCCCCTGGTGGGATCTGGTGACGTGTTACCTCATGCCTACGTCAAGTCCGTTGACTCGCAGCGCACGCTCAGGCACGCGTTCGTAAACACTGTGGCGCTCGTCCACGCAATCCTGCTGAGTCGCGCGCGGAGGGAGAGTACAGTCAGCCCAGTGTTTCTGAAATGTAACTGGGTCGCACGTAGCGTCGCTTCGGTTTTGCCTTCGGGCAATGATAACCAGGCCTCTGTGGCTCCCGCGAACAAGAGAGAGCCTTTCCGGTGGCATATTAGAAGCGTGTACCGATGGCACCTGGGTCAACTATTCACAGCAGAGCCACCATACTTCTTCAGCTGCCCAGCCTCACTCATTACCTTCCCCTTCTTCGGCCGGCCCCGTTCTCTCATGCGAGGGCGCATGAGTCTAGTGGAAACGGGGGATCATGGCgtgCTcgtggccatctttgatccagccgcCCGAGGGACGACTACGAGAGAGGACCACCATGCCAGTCCCGCTTCAACGCCCGAATTCTGCCACCGTCGAGGGGGTCTTCCCGTAGACGTCGACGCTACTAAACAGGCCAGCGCGAGTTTGAGGGCAAGATGGTGCGATCCAGAGCGAACAGGTGTGGTCGCGAGGCGCAGATACAGACGGCCTCACGATGACAGTGACTACGGCTACCGAGGTCGTGGCGTAGAGCGCGCGAGTGTACACAGCGCCCGGAGGATAACGGGAGAGGCACGAGGCGTCCCGGCGCGATCGTGCGCGGCCAAGAGGAGGGAGCTCTCATGTGGTATATACCTATACAAGGCTAGTATACAGTCATTCAGCCCGTCTTTATTCGGTGTTGAGACGCAGCTAGCTGCACGCGGTACGAGCTGCCTAGCCACCCCAGGGGAAAGGAGTTGGGATAGAGGACGGCTTGGCACACCGCCGGTTATCCTGGAAGCTGGAGTGAGGGAAGATGTTAATTGGCGGTTAGTCTCTGCCTCCGTGGGGGGTGTGGAAGGTTGTAATTACAGCCCCTGCCTCCGGTACCACGCCCCCTTTCGACACCCACCCTCGCCCCTTCCGACCTCGAACAACATCtcggaaaatataaaatatggggCTAGAGTTCTACTCCCCTCCCTCCATTCCCCAGACTCAACTTTGCACACCCATCTCTCCCGCACTCCAGTATTTTGA
- Protein Sequence
- MPCVYKRKQGAPLRGIWTEEASSEAIRRYKAGDIGLREAARYYGVPTRTLVRRIASGNNFKRGLGPEGVLHRAYEKLLVAHIQHLVTTGFSPVVQTVHRLAYQSAENLGFKFKFSHTTKKSTLPRAPLSTAGIDDKEIAGIQRYSSHHPPNGCIILRCWRENFLVPGWTIMHLVTCAEYSRRMALNFAFARGTQSVLFAIRVCAHDVRTIPSAFLEMMHRLADTWIGIPPTVFVPPLVGSGDVLPHAYVKSVDSQRTLRHAFVNTVALVHAILLSRARRESTVSPVFLKCNWVARSVASVLPSGNDNQASVAPANKREPFRWHIRSVYRWHLGQLFTAEPPYFFSCPASLITFPFFGRPRSLMRGRMSLVETGDHGVLVAIFDPAARGTTTREDHHASPASTPEFCHRRGGLPVDVDATKQASASLRARWCDPERTGVVARRRYRRPHDDSDYGYRGRGVERASVHSARRITGEARGVPARSCAAKRRELSCGIYLYKASIQSFSPSLFGVETQLAARGTSCLATPGERSWDRGRLGTPPVILEAGVREDVNWRLVSASVGGVEGCNYSPCLRYHAPFRHPPSPLPTSNNISENIKYGARVLLPSLHSPDSTLHTHLSRTPVF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -