Daus018602.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- -
- Assembly
- GCA_029891345.1
- Location
- CM056993.1:274155098-274164019[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.2e-06 0.039 17.2 0.0 12 36 166 190 164 196 0.83 2 3 0.51 2.2e+03 2.0 0.0 25 39 233 247 227 253 0.75 3 3 0.0016 7 9.9 0.5 4 24 273 293 271 294 0.90
Sequence Information
- Coding Sequence
- ATGAACGATGCACCATCAGCACCTTCCCATCAGCCTGTCACATCTCCCGAGCCAAGAATCAAGGTTGTTCCAGCTTCCACAAGGTTGATTCTGGTGATTCTGGTCTCCGAGGAGGTTCCGCCAACCATGTTGGACCGTCGAGCAACAAAGACACAGACGTCCAACCCAATAGGCAAAGGAAACGACAGCCCCATCAGCACCTTTCCCCCAGCCTGCCACATCTCCCAAGCCAAGAATCAAGGTTGTTCCAGCTTCCATGTAGCCGATTATGGTCCCCGAGGAGAACACCAACGTCTTACTACCTCCTCTTGTCCGAGAGGAAACCAGCCCATGGTATGTGCTTTACTCATGGGCACAGAGGTTAGGTCCGGGGCGGCCAACCCTTGGTTCTGGAGTAGAGGAGCAGTGGAGTTGAACCGACAGTACTGTGTTGATCAGTACAGTACAAGTGCACACCACCCTTCTCCAAGAGTAACCAACTCCAGCAACAGCTACTACTACAATGGAGCAAGTCTGCAGAAGGCGGCCGAGCAGTTTAAGATCCCCAAGACAGTACTGTGGAGGAATGTGCACAAGCAGTTGGGAACATGCTCTCAGGTTGGCAGGACTAAGTTCAGGAAGACTTACGATGAGGAGAAGAGACGTGCTGCTGTCAAGGCCCTGGAGCAAGGAGACAACCTCACCCAAGTATCCCACCAGTTTCAGATCCCCAAAACAACGTTGTTTCGTGAGAAAACACGCCTAGTGGAAACGGGTAGACTTCCATGGTCATGTCTTAAGCGGCGTGGTCCATACCTGGATGGCTTCAAGAAGAGCAGACTAAGCGAAGCTGTTGCAGCATGCAAGGATGGGAAGATGTCACAAGCATTGGCTTCTTCAATAGCAGAGCTGATAGAACGTGCACAAGAAACAGCGCGCAATTACTCAGAGCAATCTGATCTAGACCGTAGGCAGGTAGAAAAGGAGAAGGAAAGGAGAACACTGACAGGCCATGCGCCCGCCCCTATGCCACCTGAATCCCCAACCTCGATTTCCCCTGCTATCAGATACCGTCAAAGTGTCTATTGTGCTGGCCgacatcacaacagagactgccccACGAAGAAAGAGAGGGCGAACCCAGAATCAGAACAAGGGGAAGAAGAACCCGCAATCACGCTCCTGAATTTAACCAAAGAGTTTGATTCCCCTGAAATGCCCAGTGTAGAGCAGCACTGCGTCCTCGACTATGGACAATGCCGCCTTCAACTGGGAAGACACAGAGGAACCCTCATTAACTGGGAAGGCAGCCAGCTGAATGCTGCCCCTCCCCATACCTCGATGTGCCTTCAACAGTTGCTGGTAGAAACGAACCAGTCAGCCCTAATTCATCCGACGAAGACTAGAAGTCAGGCCCGAAGAGCCCATCGACGTCATGCGCTACCTCAGTCCGAAGAGgccccagaccaagagctttcgAGTCCCCCGACCTTCAAACGAGGCCCAATACCCAGAAGGGCAACTCTCAATGTTGATCCAAGGCCAACAAAGAGGCCCGAGGTCCAAACCCCGGAGCCCGACAGGAAGCCATTCTATTTTCCACCTGGGAGAATAGAGATGCAACAGCGCCGAGAAGCAGTCTCTGTTAAATCCCTGCCCTCGACACCAACCAGCTATGGCCACTGA
- Protein Sequence
- MNDAPSAPSHQPVTSPEPRIKVVPASTRLILVILVSEEVPPTMLDRRATKTQTSNPIGKGNDSPISTFPPACHISQAKNQGCSSFHVADYGPRGEHQRLTTSSCPRGNQPMVCALLMGTEVRSGAANPWFWSRGAVELNRQYCVDQYSTSAHHPSPRVTNSSNSYYYNGASLQKAAEQFKIPKTVLWRNVHKQLGTCSQVGRTKFRKTYDEEKRRAAVKALEQGDNLTQVSHQFQIPKTTLFREKTRLVETGRLPWSCLKRRGPYLDGFKKSRLSEAVAACKDGKMSQALASSIAELIERAQETARNYSEQSDLDRRQVEKEKERRTLTGHAPAPMPPESPTSISPAIRYRQSVYCAGRHHNRDCPTKKERANPESEQGEEEPAITLLNLTKEFDSPEMPSVEQHCVLDYGQCRLQLGRHRGTLINWEGSQLNAAPPHTSMCLQQLLVETNQSALIHPTKTRSQARRAHRRHALPQSEEAPDQELSSPPTFKRGPIPRRATLNVDPRPTKRPEVQTPEPDRKPFYFPPGRIEMQQRREAVSVKSLPSTPTSYGH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -