Daus018575.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- -
- Assembly
- GCA_029891345.1
- Location
- CM056993.1:273828835-273829425[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.3 4e+04 -2.1 0.1 29 40 48 60 48 62 0.80 2 3 3.9e-17 1.7e-13 53.6 0.0 2 44 65 108 64 109 0.95 3 3 4.9 2.1e+04 -1.2 0.0 28 39 107 119 105 123 0.73
Sequence Information
- Coding Sequence
- ATGGAGACCCCTTCTCCTCGCGACATGTCGCAGTTCTCCGGACACCAGATGGTGCCCCTGCCGTCGTGTGGCGTCAGCTCTTCCCCTACAAGCCCCTGCCTCACTTCATGTCCTAGCATGTGCCCCAGTTCGTGTAATGGTCCAGCCACCACTACTCAGGTGCGACGCAAGCGCAGCATCAACCCCCAGGCGGACGAGAACTTCATTAGAGCTCTAGAGGCAGTCCGATTCGGTGGTATAGGGTTCTGCAAAGCAGCTCGCATGTATGGTGTTAATAACCGCACCTTGTGGCTAGAGTACAAGAAACGTGGATACCCGGTTACGCGGCCCAGCTTGAAAAGTCGCGTGAAGCAGGAGCCGACCCCTGTTCAGATGGAACAGGCATCCAGTATGATACCTCCTCAAGTGATGGGTCCACCACCACAAACAAGTACTGGTATGGGTGAGGGTTTTGCGGATTCCCGACCACCACCACTGTTTGTCCATCCTCAGAGCCCCATGCCTCCTCGTCAAAGGTTCCAAGAAAGTGTGCAGATAAATGTCAATCCTTCATCCATGAACATTCATGGTGTTCATTTCAGTGCCATGTGA
- Protein Sequence
- METPSPRDMSQFSGHQMVPLPSCGVSSSPTSPCLTSCPSMCPSSCNGPATTTQVRRKRSINPQADENFIRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPVTRPSLKSRVKQEPTPVQMEQASSMIPPQVMGPPPQTSTGMGEGFADSRPPPLFVHPQSPMPPRQRFQESVQINVNPSSMNIHGVHFSAM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -