Daus001170.1
Basic Information
- Insect
- Dryococelus australis
- Gene Symbol
- -
- Assembly
- GCA_029891345.1
- Location
- CM056993.1:15361222-15379944[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.4 1.9e+04 -1.0 0.2 29 39 52 62 52 64 0.81 2 5 8.7e-12 3.7e-08 36.4 0.0 1 38 165 203 165 208 0.90 3 5 6.5e-13 2.8e-09 40.0 0.1 1 39 219 257 219 260 0.95 4 5 7.7e-19 3.3e-15 59.0 0.0 1 45 274 319 274 319 0.98 5 5 1.8e-19 7.9e-16 61.0 0.1 1 43 326 369 326 370 0.97
Sequence Information
- Coding Sequence
- ATGTTGTTCACCCACAGGAGGGGTAGTGAGTGGAGCGATAGGAAGGGAGCTGCAATCTTCACAGGGCCTCACCTCATAGTTTCCCCTAGTCATCTCTTGGGGCCCTTGGTAAAACTCCCCGGGGGCTGTAAACCCAGTCATCGAGATCCTCCGCCTAGGCCTACCCTTAGGCGTAGGCGTCAAGTGCATCAGCGACCTAGACGCAGCTTCACCAACCAGTACAAGTGGGCCGACAGCCTGCACGCCACAGCTGAGCACGTCTCCTTGCTGAGCTGTCTAGCAGACACAATTGTCACCAACCAGCCAGGCCAGGAGGTTCACCATTGGACCAATTTCGACAAGCACACACCGACTAGCACAATCTTTGTGCGTGGTGGCATTGCTGTGACAGGTGTCTCCTTGACTGACGTAGGTGCGCACTCACCCTCTCTGTCATCAGATGGCAGCAGTGATGCTGGCAAGGGGAACAGTGGCATGGGGCCCAAGACGTGGACTCAGGAAGACATGGAGCTGGCTTTGGATGCTCTGCGCAACCACAACATGAGTCTGACTAAGGCCTCTGCCACGTACGGCATCCCCTCGACGACGCTGTGGCAGCGTGCTCACCGCATGGGCATCGATACGCCCAAGAAGGAGGGCCCCACCAAGTCGTGGACTGAGGAGAACCTTAACAGTGCGCTGGAAGCCCTGCGTACGGGCACAATCTCTGCCAACAAGGCCAGCAAGGCCTATGGCATCCCAAGCAGCACGCTCTACAAGATAGCACGTAGAGAGGGTATACGCCTGGCCGCACCCTTTAATGCAGCTCCTACGACGTGGACCCCGGACGACCTGGAGCGTGCACTGGAAGCCATCCGCACAGGCCAAACTTCAGTGCAGCGAGCATCGACAGAGTTTGGCATTCCAACGGGGACGCTGTATGGGCGCTGCAAGCGGGAGGGCATAGAGCTGTCGCGCAGCAACCCTACGCCATGGTCGGAGGATGCAATGGGAGAGGCGCTGGAGGCAGTACGTGTCGGCCAGATGAGCATCAACCAGGCGGCAATTCATTACAATCTGCCATACTCGTCGCTGTACGGGCGGTTCAAGCGCGGCAAGTATGAGGCAGAGGGACACCAGCAGGGGGAGGAGACAAGTCAGTCACCACCGTCGGCGGCCCCTCAGGTGATGATAGTGCCGTATCCACAGCAGCATATAGTGCCGCCACCTCAGCCCCCACAACTGCCGCTCTACCAGCAGCACGTACCTCACAGTGCCAGTTGA
- Protein Sequence
- MLFTHRRGSEWSDRKGAAIFTGPHLIVSPSHLLGPLVKLPGGCKPSHRDPPPRPTLRRRRQVHQRPRRSFTNQYKWADSLHATAEHVSLLSCLADTIVTNQPGQEVHHWTNFDKHTPTSTIFVRGGIAVTGVSLTDVGAHSPSLSSDGSSDAGKGNSGMGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRMGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPDDLERALEAIRTGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYEAEGHQQGEETSQSPPSAAPQVMIVPYPQQHIVPPPQPPQLPLYQQHVPHSAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -