Basic Information

Gene Symbol
osa
Assembly
GCA_029891345.1
Location
CM057008.1:5246917-5267854[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-09 5.8e-05 26.9 0.0 49 89 275 312 255 312 0.83

Sequence Information

Coding Sequence
ATGTGGAACAGGGCTGCGATAGCCATTGGAGGCCTGCCCACCAGATATGATAAGAGGGCAACTGGTCAGGCATCAACTCACGTGATGCACAACTCAGCCATCTCTCTGAAGCTAGTGAAGATGTCATCCTTCCCTACAACCCACCCTTTGGTATTCGTCCAGTATTCCATTTGCCTTCTTATTCCAGTCCACCAGGTCCTCTGTCCTGTAACGCTGCAACTGACGTCTGACACTGTCCCGCCCCCTGCCCCCCCTTTCACCACCAACAGTGTGAATTACCCAGCAAAGAGGAGTGCCCCCCCTCCCTCGTCTGATAAGGGTTTACTCCTCTACTCCCCTTGGTCTAGGATAAAGACACTCGAGCGTTCCTCTCAACGTAGAGAACCACACCCTAGCCATGCACCAACCCATGCGCCTCAGAGGGAGGAGCTATACCGACCACCCTACAAGCAGGTGGATGTATGTTCCTGTACCGCCACAGAACCGCAGCTTGCTCCGTCAGCTCATATACTGGAGCTCTCTGCTACTACCTCTACCTCACGAAGGACCACCGCTACCTGCAAGACCAGGCCTTCCGCCCTTGAAGTATTAGCCCCCATAACACTCAGTACCCCTCTGGTAGCGAAGCCATACTCTGGTGTCATCTCTCAGGCTGTTCTGGAAGGTGGCTTCCCCACAGTGTGGGGTTGTGTCAGCTGCGTGATCTCAGGTGCAGCGCTAGCTGCTTGGCTAGCTCGTATCACATGTGGAGGGGGTAGCGTGACGTCTGATGTGAAGGTAAAGACAATCTTTGCTGACGTGACCATGCCTAGGGGCATGCTGGTAACAAAAAACAAGACGTGGAAAGACATAGCAGGACTGCTGGGCATCGGAGCATCTTCGAGTGCTGCATACACGCTACGGAAGCACTACACGAAGAACTTGTTGGCTTACGAATGCCACTTTGACCGGGGTGGCATAGACCCACAGCCAATCATCAACCAGGTGGAGGCCACATCGAAAAAGAAAGGTGCCAAGGCTACTTCAGTGCCTTCTCCAGGTACCATATATACTGCAAGCCTGTCCAAACAGCCGTTCACTCCACATTGGACTGCATCTGCTTAA
Protein Sequence
MWNRAAIAIGGLPTRYDKRATGQASTHVMHNSAISLKLVKMSSFPTTHPLVFVQYSICLLIPVHQVLCPVTLQLTSDTVPPPAPPFTTNSVNYPAKRSAPPPSSDKGLLLYSPWSRIKTLERSSQRREPHPSHAPTHAPQREELYRPPYKQVDVCSCTATEPQLAPSAHILELSATTSTSRRTTATCKTRPSALEVLAPITLSTPLVAKPYSGVISQAVLEGGFPTVWGCVSCVISGAALAAWLARITCGGGSVTSDVKVKTIFADVTMPRGMLVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEATSKKKGAKATSVPSPGTIYTASLSKQPFTPHWTASA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-