Basic Information

Gene Symbol
-
Assembly
GCA_029891345.1
Location
CM057004.1:82954106-82956385[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.063 2.3e+03 2.5 0.0 37 37 139 139 55 222 0.68
2 7 0.022 8.3e+02 4.0 0.0 25 63 235 273 204 283 0.72
3 7 0.019 7e+02 4.2 0.0 25 63 307 345 276 361 0.73
4 7 0.34 1.3e+04 0.2 0.0 27 45 363 381 345 408 0.58
5 7 0.016 5.8e+02 4.5 0.0 25 63 415 453 384 498 0.76
6 7 0.15 5.5e+03 1.3 0.0 34 37 541 544 497 591 0.60
7 7 0.25 9.3e+03 0.6 0.0 26 39 605 618 571 643 0.56

Sequence Information

Coding Sequence
ATGGCCGAGCGTCATGGCCTCATCCAACTTTATGATATTACTGTGGTTCGTAGTAGCCTTCCGCAGAGGGAGATGAGCCAGACCCGCCAACCAATCCAAAGGTCGGCGCCGGGTGTCGAAAGTGGATCCACCAGATACGAGACAAAAACGCTACCGTTTACACTAAGGGGGCCGAATGATCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGTGGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGTGGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGTGGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACTTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCTGCTACCACCTGACGCGAGCGGTAGAGGCTAGCATTGGGCACTGGCAGCTAGCCCTGCTACCACTTGGCTCACGATGA
Protein Sequence
MAERHGLIQLYDITVVRSSLPQREMSQTRQPIQRSAPGVESGSTRYETKTLPFTLRGPNDLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLWRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLWRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLWRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRALACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLACYHLTRAVEASIGHWQLALLPLGSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-