Dlab006806.1
Basic Information
- Insect
- Dryobota labecula
- Gene Symbol
- nfxl1
- Assembly
- GCA_947523025.1
- Location
- OX383306.1:21597663-21600143[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.73 1e+04 -2.7 0.2 12 16 32 36 32 37 0.76 2 18 2 2.8e+04 -7.8 5.6 15 19 134 138 133 138 0.81 3 18 0.021 2.9e+02 2.2 0.2 4 10 169 175 168 176 0.96 4 18 3.1e-07 0.0044 17.6 15.9 3 19 186 202 185 202 0.95 5 18 5.2e-08 0.00074 20.1 9.6 3 19 239 255 237 255 0.92 6 18 1.7 2.4e+04 -3.9 1.9 6 10 280 284 279 284 0.83 7 18 3.9e-09 5.6e-05 23.7 11.9 1 19 290 308 290 308 0.99 8 18 4.5e-06 0.063 13.9 18.5 3 19 345 361 337 361 0.88 9 18 1.2 1.7e+04 -3.4 0.4 7 11 365 369 365 369 0.84 10 18 5.4e-06 0.076 13.7 18.3 1 18 395 412 395 413 0.97 11 18 4.5e-10 6.3e-06 26.7 14.0 1 19 422 440 422 440 0.99 12 18 0.00016 2.2 9.0 6.1 9 19 488 498 486 498 0.89 13 18 0.0015 21 5.9 4.9 1 12 508 518 508 518 0.90 14 18 0.31 4.4e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 18 0.12 1.7e+03 -0.2 0.5 7 12 567 572 567 579 0.83 16 18 9.1e-06 0.13 13.0 5.3 1 11 588 598 588 599 0.97 17 18 9.2e-05 1.3 9.7 12.8 4 18 630 645 628 646 0.86 18 18 5.2e-06 0.074 13.7 11.1 1 16 687 701 687 706 0.92
Sequence Information
- Coding Sequence
- ATGGCGCGCCGATACAGAGACGCGGCTGCAAAATTGCAGCAAAACGTCCAGAAACATCTAAAAGTAATGAAAGAACTATCGTCGTCTGAAGATGAGGGTCCTTGCGAATCCAACGTCTTGGAAAGCATGTTCCAGAGCTACTGGCGCGGCGGCGGAGACACTCAAATGTTGAACAGGACCAAAAACCTCCTTGAAGAAGCCATAAGCGGCCGTTCTGTTACATGTCTTATATGCATAGGATCGATAAAAAAATCTCACGCTATATGGACTTGTGATCATTGTTTTTCATATTTCCATCTTTCTTGCATTCAAAAATGGGCGAATGATAGTATAAGCTTGCGCAGTGAAGAAAGTACAGGCCCGATAGCTGTCATAAAACAACAAAAAATCGAATGGTGTTGCCCTAAGTGCCGAAATTCTTATTCTAAGGAAGAAATACCTCGTAAATATCGCTGTTTCTGCGGCCAAACTGATGATCCACCACACCATCCTTGGCTCATTCCTCATACCTGTGGTGAAATCTGTGGAAAGAGGTTGTCTACTGGTGAAAATTGTAAACACAAGTGTTTGCTGCTATGTCACCCTGGTCCCTGCCCTCCATGCCCACAAACTGTCAATGGCATATGTTTCTGTGAGAAGGAACATAAGAGAGTGAGGTGCAGTGCTGCTAAATGGGCCTGTGGCCAGCTGTGTAAGAAAACTCTTTTGTGTAAGACTCATTATTGTGAAAATGTCTGTCATGCGGGTGATTGTGCTCCATGTAGCTACACTAGTATTCAGCAATGTCAATGTGGTTCAGAGAAAGCTAAAAGACCATGTAATGATCCATTCTGGCAGTGTAAGAAGCCTTGTAACAAGATGTTTTCCTGTGGTTATCATAAATGTGACAGAATCTGTCATTCAGGCAACTGTGGAGATTGCCCCAACTCTGGAACTTTATCATGTCCCTGTGGAGCTAACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACCTGCCTAGGTACATGTGGTAAGAGGCATGAGGATTGTGATCATAAGTGCCCAGAGAAGTGCCACAATGGTAACTGCCCACCTTGCCAAGTTTTAATCGAAAAGAAATGCCACTGCTCCACACACACAAGGGCCCTACCATGTAGCAAGGACTTTAAATGTGACACTAAATGTCGAGGAATTAGGCTATGTGGCAAACATGCTTGTGGAAGAAAATGCTGTAATGGAAACTGCCCCCCGTGTGAGAAGACATGTGACAAAGGGCTCCACTGTGGTAGGCATAAATGCACAAATATTTGTCATCGTGGACCATGCTATCCGTGCCCACTAGAATCCAAAGTAACTTGCCGATGTAAAGAAACTTACATAAGAGTCCCATGTGGACGGGAAAGGCAGACAAAACCTCCAAAATGTAACTTGGCCTGCAAAATTAAATACAAATGTGGTCACAGCGAAGAAAATAAACACTCCTGTCATTTTGGTGACTGTCCACCTTGCAGAGCAATCTGTGACAAGCAATATCCTAAGTGTAGTCACTATTGTAAAGCAGTATGCCATGAATATGTTGCAGTGCTGTTCAAACAAGTTGAGAAACCTGCTACTCCTTGGGAGGTACAACCACCAAAGACTAAGATTATGACCTTAGATTGTCCACCATGTGAAACACCAGTACCAATGGTTTGTTTCGGAGAGCATGAGACGGAACAGCAGCCTTGCCACACAGCTTCACGAAGGCCGTGTGGAAGAGAGTGTGGAAAACAATTGGCTTGTGGAAACCACAAGTGTACTTTACTCTGTCATCTTTACAAACCTGTTCCTGAATACCCGAATGTGCCTTCAACTTGTAAGCAATGTAATAGAGAATGTTCAGTTCAACGTCCTGAAAAATGTGCCCATAAATGTTCTATTAGGGCATGCCATCCTGGTCCTTGCCGCCCTTGTGAAATACTTGAACGCTTGGCCTGCCACTGCGGCGTAACAGAGATATACTTACGCTGTCGAGAATTGTCTGCAGCTACTGAAGAGATGCTATCATGCAAGCAACAATGTCCTAAGAACTTAGACTGTGGCCATCGCTGCCGTAACACATGTCATTCAGGAGCTTGCGGTTACCAATTATGCACTAAGAAAACTAAAGTGTACTGCCCTTGTGGTACAATAAAGAAGGAGTTGCCTTGCAACTCAGTTAGAAACGGAGACACTAAAATACTGTGTGACAATACCTGTGAAAGTAAGAAAGCTGCTGCTCAAATAGAACAAGAGAAAGAGAAACAGAGATTGAAAGAGCTCGAGGAAGAAAAGAATCGTAAAGAATTAGCAGAGTATGAATGGAAACTAAGCGGTAAGAAAAAGAAGTACAAGGAAAAGAAGATGTTTGTTGGTAAAGATGACCGAGGATTCCTAAAGAGGTATTGGGTACCAATATCATCATTCCTAGTTATGATGATAGCGGCTATTTATTATATATTTTATGTTGGATTAGAATAG
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKVMKELSSSEDEGPCESNVLESMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYSKEEIPRKYRCFCGQTDDPPHHPWLIPHTCGEICGKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGICFCEKEHKRVRCSAAKWACGQLCKKTLLCKTHYCENVCHAGDCAPCSYTSIQQCQCGSEKAKRPCNDPFWQCKKPCNKMFSCGYHKCDRICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEDCDHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRALPCSKDFKCDTKCRGIRLCGKHACGRKCCNGNCPPCEKTCDKGLHCGRHKCTNICHRGPCYPCPLESKVTCRCKETYIRVPCGRERQTKPPKCNLACKIKYKCGHSEENKHSCHFGDCPPCRAICDKQYPKCSHYCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVPMVCFGEHETEQQPCHTASRRPCGRECGKQLACGNHKCTLLCHLYKPVPEYPNVPSTCKQCNRECSVQRPEKCAHKCSIRACHPGPCRPCEILERLACHCGVTEIYLRCRELSAATEEMLSCKQQCPKNLDCGHRCRNTCHSGACGYQLCTKKTKVYCPCGTIKKELPCNSVRNGDTKILCDNTCESKKAAAQIEQEKEKQRLKELEEEKNRKELAEYEWKLSGKKKKYKEKKMFVGKDDRGFLKRYWVPISSFLVMMIAAIYYIFYVGLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_01440670;
- 80% Identity
- -