Dlab009208.1
Basic Information
- Insect
- Dryobota labecula
- Gene Symbol
- grn
- Assembly
- GCA_947523025.1
- Location
- OX383288.1:19792502-19804661[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-20 2.7e-16 59.5 4.7 1 35 188 221 188 222 0.98
Sequence Information
- Coding Sequence
- ATGTTTGGTAGTCGGACGCTGAGCGGCGGCAGCGGGCAGGTGTGCCGGCCGCATTTCCACACGCCGCTGCACCCCTGGCTTGAGTCTAAGGCGCTGAGCGGCGGCGCGTGGGGCAGCGGCTTCCAACAGGACGCGGCGCAGGCGGACAAGCCCCTGTCGCCCGCGCAGCACCACCACCCGCACCCATTGTTCTCGTTCCCCCCGACGCCGCCGAAGGACTCGACTCCAGACTCCGTGGCGGCGGCTGCGCTCGGCCAGCAGGACTACCAGGCCGCCGTCGCGCACGCCACCGCCATGAGCGTCGCCTTCATGCAGCAGCAGCAGGAGCTGCCACTGTGTGGCGACGTCAAGCCCATGATGGGCGCGCCGCCGTCCAAGCAGCGCGAAGGTGCGCAGCCGGACTCGTGCCCCCAGGAGTCGAGCCAGCCCTCCGGGGAATACAACGCGCAGTACAACGCCGCCGGCGGCGACTACTACAACTACCAGGGCAAGGGGTATAGTGGGCAGCAGCAGAGCAAGCCGCGACCGAACAAGACGCGAACGAGCGCCGAGGGGCGAGAATGCGTCAACTGCGGGGCGACCAGCACACCTCTCTGGCGACGCGACGGCACAGGACACTACCTCTGCAACGCCTGCGGTCTCTACTACAAGATGAACGGACAGAATCGACCCCTGATCAAGCCCAAGCGAAGATTGCGAGACAATGCGCGCCTCTCGCCGCTGTCCGTGCTCTTGGCTAATCCTGAGCAGCGTCTACCAGTGGCACAATGA
- Protein Sequence
- MFGSRTLSGGSGQVCRPHFHTPLHPWLESKALSGGAWGSGFQQDAAQADKPLSPAQHHHPHPLFSFPPTPPKDSTPDSVAAAALGQQDYQAAVAHATAMSVAFMQQQQELPLCGDVKPMMGAPPSKQREGAQPDSCPQESSQPSGEYNAQYNAAGGDYYNYQGKGYSGQQQSKPRPNKTRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLRDNARLSPLSVLLANPEQRLPVAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00726983;
- 90% Identity
- iTF_00726983;
- 80% Identity
- iTF_00726983; iTF_00445768; iTF_01535497; iTF_01085965; iTF_00831790; iTF_00907539; iTF_00925395; iTF_00302711; iTF_00758822; iTF_01526680; iTF_00449785;