Basic Information

Insect: Dryobota labecula
Gene Symbol: -
Assembly: GCA_947523025.1
Location: OX383314.1:5814530-5853731[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.018 1.7 9.9 1.3 1 23 294 317 294 317 0.97

2 18 0.51 47 5.4 0.6 3 23 326 346 324 346 0.96

3 18 0.00011 0.01 16.9 0.4 2 23 382 404 381 404 0.96

4 18 9.5e-05 0.0087 17.1 1.1 5 23 409 428 408 428 0.96

5 18 1.3e-05 0.0012 19.8 2.0 1 23 434 456 434 456 0.97

6 18 9 8.2e+02 1.4 0.6 2 22 466 486 466 490 0.89

7 18 0.0014 0.12 13.5 2.5 1 23 494 517 494 517 0.91

8 18 8.8 8.1e+02 1.5 0.9 1 8 523 530 523 531 0.92

9 18 0.048 4.4 8.6 4.3 1 23 767 790 767 790 0.96

10 18 0.0011 0.1 13.7 2.0 2 23 798 819 797 819 0.97

11 18 0.097 8.9 7.6 0.7 2 23 855 877 854 877 0.96

12 18 0.0025 0.23 12.6 3.7 3 23 881 902 879 902 0.97

13 18 6.1e-06 0.00056 20.8 1.0 1 23 908 930 908 930 0.98

14 18 3.2 2.9e+02 2.8 0.1 2 19 940 957 939 960 0.77

15 18 0.00029 0.027 15.6 1.7 1 23 968 991 968 991 0.91

16 18 1.9e-06 0.00017 22.5 1.0 1 23 997 1019 997 1019 0.97

17 18 0.00012 0.011 16.7 1.1 1 23 1028 1050 1028 1050 0.98

18 18 0.0015 0.14 13.3 2.5 1 23 1056 1079 1056 1079 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.018	1.7	9.9	1.3	1	23	294	317	294	317	0.97
2	18	0.51	47	5.4	0.6	3	23	326	346	324	346	0.96
3	18	0.00011	0.01	16.9	0.4	2	23	382	404	381	404	0.96
4	18	9.5e-05	0.0087	17.1	1.1	5	23	409	428	408	428	0.96
5	18	1.3e-05	0.0012	19.8	2.0	1	23	434	456	434	456	0.97
6	18	9	8.2e+02	1.4	0.6	2	22	466	486	466	490	0.89
7	18	0.0014	0.12	13.5	2.5	1	23	494	517	494	517	0.91
8	18	8.8	8.1e+02	1.5	0.9	1	8	523	530	523	531	0.92
9	18	0.048	4.4	8.6	4.3	1	23	767	790	767	790	0.96
10	18	0.0011	0.1	13.7	2.0	2	23	798	819	797	819	0.97
11	18	0.097	8.9	7.6	0.7	2	23	855	877	854	877	0.96
12	18	0.0025	0.23	12.6	3.7	3	23	881	902	879	902	0.97
13	18	6.1e-06	0.00056	20.8	1.0	1	23	908	930	908	930	0.98
14	18	3.2	2.9e+02	2.8	0.1	2	19	940	957	939	960	0.77
15	18	0.00029	0.027	15.6	1.7	1	23	968	991	968	991	0.91
16	18	1.9e-06	0.00017	22.5	1.0	1	23	997	1019	997	1019	0.97
17	18	0.00012	0.011	16.7	1.1	1	23	1028	1050	1028	1050	0.98
18	18	0.0015	0.14	13.3	2.5	1	23	1056	1079	1056	1079	0.96

Sequence Information

Coding Sequence: ATGGAACAACCATTAAATATTTGCGTGACATGTCTAAGCACGGATCGCTGCCTCGTTCCTTTGCATAAAATAAAAATGATACTACAAGAAATACATTTGGATGAGTTGAAAGAGTTCCATGGTGGAGTATGTTGGGAATGCCGGAGTATCCTGGCGAAGTTCTATAGGTTTAAGAAAAAAACTAAGGTAGCACAAGAAACCTTGTCACAAACTACAGAGAATTTCGGTATAAAACCGCTTACAACATTAACATCAAAAACCAAAGTTTTCTATGACTATCAGTATACTTATAGCTTGGACCCTTTAACAAACTGTGACGCAGAATTAAAAGCTGAACCAGAAACAATAAAACAAGAAATCATAGACCAAAGTGAAAACATAAATAACACTTCAGATTTTGATGAAGAAGTAAAAATTGTCTATGATAATGAAACAAAACAATATGATAATTTATTGAGAAAACAAGAAATTAATAACCACATAGTTTATGATGGTGGTGATAATATAGAAGACAATATTTCAGAATTAGATGAAAAAGTTTTGGATTTCGATGAAAAAATAACTGGCATTCCTGAAAAAATCGAAACAGTCTATGTAGATGTGGTAGAAAATAAAAACAATGGTAATTTGTTGGTTGAAAACGAAGTTAAAATTAACTTTGCCACAGCCATTTCCCGTCAAACCGACGAAAAACTTAGTAAATCAACCGAGAATGTTTATGTTAAAACTATTGAAAAAAAACATTCACGAAACAGAAAAGCCAAAAGAGATATAAAAACAGATGTCCAAGAGAAGTTTGTACGAGTTGAGTTGAGTGAAGAAGAGATGCTTAGACTAAGAGAAGAAAAAAGAAGTCATCACAATTTTAAGAAGCTTCCATATAAATGTGATAGCTGTGTACTTGGGTTTACTAGGAAGGATACTTATAGTTTGCATTTGGAGAAGAAGCATGATGAGAGCATTGGCGACCAAATTTGCGATGTATGCAGCATCCGTCTACCTCACAAACTAGCTTTAAATAACCATAAAATCAAGCACTATGTTGTGTACAGATGTCGATTATGTAAATATGAGGCTCATGAGTTTGTGTCAGCGGTGAATCATTGTAAGGCTAAACATGCAGCAGACAAGCCTGATAGCATACATTGTTCTCAGTGTAATGTTGTTGTCAAAACCCCAGATGACTTAGAAAAACACATGCAGACGGAACATACCCTTTTCTGTGACTGCGGAATCAAATTCAAAGACAAGAACAATCTTAGAAGACATATGAGCCGAGCTCACTCCGTACTACGCAACTTCATATGTGATATTTGCAAAAAAACTTTTAAAACCAAGACGCGGCTGGAAACTCACATGGTGAGACATAGCGGCAATATTGCCAAGAAGCTGGCATATTGCCAACAGTGCAATGTACAATATAAGAATATGCAGGTCTATAGGATGCATTTGAAGTCAAGTGCTAATCATTCAGAGGGATATCCATGTTCAGAGTGCAATAATAAATTCAGGTCGAAAGGATATTTGAAGCAACACTATGACTTCTATCATTTACGAAAGTCGCAGCATAAATGTAAAATATGCAATAAGTTACAAGAATCCTCAGGTGGAGTATGTTGGGAATGCCGGAGTACCCTGATGAAGTTCTATAGCTTTAAGAATAAAGCTAAAATAGCTCAGAAGACCTTGTCACAAACCACAGGGCATTTCAATATAAAATCTCTAACAACACTTTCTAAAACCAATATTTTATTATATACGATTACATACGATTTTGTTCCTAAGAACAACTGTGACACAGAACTAAAAGTGGACCAAGATTCCATAAAACAAGAAAATGTAGACAAAAGTGAAGATTTTATAGACAAAACTGATGATAATTTAGAAGACACTTTAGTAACAAATGAAAATCCAATTGAAAAACTGGAACTAAACGAAAATATTTGTTCAGAAGCAGATGTAATAGAAAATAAATACCATGGTAATTTGTTCGGGAAACAAGAAAACTATTCTCAAAATGAAAGAGATATCAGTAATGAGATGAATGAAAAATTTAATAAGATAACTAAAAATTTCGAAATAATAGACGTGAAACCGAACTTAAATGTATCAACAAGCACTGTCAATAGACAAGAAAAAGATGGCGTCAGAGCTACCAAAAAGACAACACCACAAAAAGTAAGAGATACAGATGATAAAGATTTCCAAGAGAAGTTGGTACAAGTTGTATTGAGTGAAGAGGAGATGGTAAGAGTAAGAGAAGAGAGACGAAATCATCCATCATTTAGGAAACTCCCTCATATATGTCATGGCTGTGTGCTTGGGTTTCGAAAAGAGGTGAAATATAGAAGTCATATGAGGAAGAAGCATGATGAGAGTATCGGCAACCTCAGCTGCGAAGTATGCAACGTCCGATTTCCTCACAAATTAGCGTTAAATAAACATAAAAGAAAGCACTATGTGGTCTACAGGTGTAGGCTATGTAAATATCAAGGCAGCGACTTGCGCTCAGCGGTCAATCATTGTAAGATAAAGCATGCAGCTGATAAGCCTGATAGCATACATTGTTCTCAGTGCTATTTTGTGGCCAAAAACCTGTTAAATCTAGAGGAACACATGCAAACGGAACATCAGTTCTGGTGTAACGAATGTGGACAAAAATTCAAATTAAAGCAGCATATTAGAAAACATATGAGTCGAACCCACGCCTCAAAACGCGCCTTCAAGTGTGATATTTGCAAAAAAGGTTTTAAAACGAATATGCAGCTAGAATCTCATTTGGCCAGGCATAATGATAATATTGCGAAGAAGCTGTCGTATTGTCAGGAATGCGATATTCAGTTCAAGAGCATTGCGATATATAGGATGCATTTGAAGAATACAGCTAATCATTCGGAGGGATACACATGTTCAGAATGTAATAAAATTTTCGCGGCGAAAAGCTACCTGAAGCAACATTACGACTTCTATCATTTAAACAAATCCCAGTATATATGTGAAATATGCAACAAGACTTTCATGTCAAAATCAAGTTTAAACAATCACCAAGATTCACACCTCGGTAAGGCCAGACCAAGAAAATATACCTGCGATATATGTAGCAAAAAGTTCTTTAATACAGCTATGCTCCGTATTCACCGACAAATACATTCAGACGAGCGCAAGTACATGTGTGAAGATTGTGGGGACACGTTCAAGCAATCAGCTTGCTTGTACACACATACGCGGCTGAAGCACAAAGATGGGGGGCGCAAGAGGAAAAGGGATTGTTGA
Protein Sequence: MEQPLNICVTCLSTDRCLVPLHKIKMILQEIHLDELKEFHGGVCWECRSILAKFYRFKKKTKVAQETLSQTTENFGIKPLTTLTSKTKVFYDYQYTYSLDPLTNCDAELKAEPETIKQEIIDQSENINNTSDFDEEVKIVYDNETKQYDNLLRKQEINNHIVYDGGDNIEDNISELDEKVLDFDEKITGIPEKIETVYVDVVENKNNGNLLVENEVKINFATAISRQTDEKLSKSTENVYVKTIEKKHSRNRKAKRDIKTDVQEKFVRVELSEEEMLRLREEKRSHHNFKKLPYKCDSCVLGFTRKDTYSLHLEKKHDESIGDQICDVCSIRLPHKLALNNHKIKHYVVYRCRLCKYEAHEFVSAVNHCKAKHAADKPDSIHCSQCNVVVKTPDDLEKHMQTEHTLFCDCGIKFKDKNNLRRHMSRAHSVLRNFICDICKKTFKTKTRLETHMVRHSGNIAKKLAYCQQCNVQYKNMQVYRMHLKSSANHSEGYPCSECNNKFRSKGYLKQHYDFYHLRKSQHKCKICNKLQESSGGVCWECRSTLMKFYSFKNKAKIAQKTLSQTTGHFNIKSLTTLSKTNILLYTITYDFVPKNNCDTELKVDQDSIKQENVDKSEDFIDKTDDNLEDTLVTNENPIEKLELNENICSEADVIENKYHGNLFGKQENYSQNERDISNEMNEKFNKITKNFEIIDVKPNLNVSTSTVNRQEKDGVRATKKTTPQKVRDTDDKDFQEKLVQVVLSEEEMVRVREERRNHPSFRKLPHICHGCVLGFRKEVKYRSHMRKKHDESIGNLSCEVCNVRFPHKLALNKHKRKHYVVYRCRLCKYQGSDLRSAVNHCKIKHAADKPDSIHCSQCYFVAKNLLNLEEHMQTEHQFWCNECGQKFKLKQHIRKHMSRTHASKRAFKCDICKKGFKTNMQLESHLARHNDNIAKKLSYCQECDIQFKSIAIYRMHLKNTANHSEGYTCSECNKIFAAKSYLKQHYDFYHLNKSQYICEICNKTFMSKSSLNNHQDSHLGKARPRKYTCDICSKKFFNTAMLRIHRQIHSDERKYMCEDCGDTFKQSACLYTHTRLKHKDGGRKRKRDC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -