Basic Information

Gene Symbol
ZNF296_1
Assembly
GCA_947523025.1
Location
OX383312.1:100983-122260[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.39 36 5.7 0.2 3 23 123 143 121 143 0.96
2 14 0.0018 0.17 13.0 2.8 1 23 289 311 289 311 0.99
3 14 2.8e-05 0.0026 18.7 0.4 1 23 317 340 317 340 0.97
4 14 0.0032 0.3 12.3 1.5 1 23 345 368 345 368 0.94
5 14 7.6e-05 0.0069 17.4 0.9 3 23 551 571 550 571 0.98
6 14 0.00015 0.014 16.5 3.2 1 23 577 599 577 599 0.98
7 14 0.52 48 5.3 5.0 1 23 662 684 655 684 0.97
8 14 0.0015 0.14 13.3 1.4 1 23 719 741 719 741 0.96
9 14 0.0033 0.3 12.3 3.0 1 23 747 769 747 769 0.98
10 14 0.27 24 6.2 7.2 1 23 778 800 778 800 0.98
11 14 4.4e-05 0.004 18.1 0.5 2 23 875 896 875 896 0.97
12 14 0.012 1.1 10.5 3.8 1 23 913 935 913 935 0.96
13 14 1.6e-06 0.00015 22.7 0.7 1 23 941 963 941 963 0.98
14 14 5.4e-07 5e-05 24.2 3.1 1 23 969 992 969 992 0.98

Sequence Information

Coding Sequence
ATGAACCACACAGCAGCTGCAATACCAGAAAACATGGACGTTGACCCACTGAGCTCGTATGAGTACCCAGCGTACGACAGCTATGCCGCCCAGTCCTACCCATACCCCAGTAAGCTACAGCAGTCCATTTACCAGGCGTACCAACAAACTAATGTCAACTACAATAATACACAACCGGCACAACCACAAGAACCGTTCAACAATCCACCGCCAACGTCACAAACATCCATTGATATTGAAATACCACTTAAAACTGAAGATACAGACCCAAAACCAGTTCTGAAAAAGAGAAAGAAGGAGAAGGATAGCCAGAAGAGTACTTATTGTTCTGAGAAGATAACGGATGCTACGTTCAAGTTCTACGGTTGTTCCGTCTGTAACATCAGTTATAATGCGTTGCACGACCTGGACCAGCATGTGACCGTGCACAAGAACAGAATGACAAGCTATAGACTGCGGTTACGAAATCAATTTAAAAAGAAACAAATAAAAAAAGAAAAGAAACGGCTTAATAAAAAGATTAAAATTAAGAAAGAAACAGAGTTTGAAATTGAAATTAAGCCAGAGGATGGTTATATTGGTGAAGAGAAAGCAACCGATGTCATTAGTAATGGTATCAATCCTGATTCTGAATGTAAAGGTAACATAAATAATGAAAACGGTGCAATAGAAGCTCAAAATAGTCAAATTAATACCAATAATGACGCAAATTCTATTAGTAACAACCCACAGAATAATGAAACAAATTCTTTGAGTAATGGGAAAATCAATGAAAATAGTGAAATGGAAAACGCAAATAGTATGAATAGTAAAGATAAAGAGAACAGTATGGACGAAGCAGAGTTAAATAATTTAGAGAAAATTTACAAATGTTTTGCGTGTCAGAAGCAGTTTACTTTGAGCTATTATTTAAAACTACATGTGAGATCACACACAGACGAGAAGCCCTACACGTGCAGCGTGTGCGGCCAGTCGTTCATCACAGCCAGCAAGTTGGGGCGCCACAACAAGCGGATCCACCTCGCCGAGCGCTACCAGTGCCGCATATGCTACAAGATATACTCCCGGTTCGAGCTACTGACGGCTCACTTTGACAAAACGCATCCTGAAGACAAGTTGGAGGGAGAACCGTATGACTACAACGCGATCCTGCCGTACCTGAAGGAGCTGGAGGAACAGTTGCTAGCGCCCGAGCTGGCCGAGCTCGACAACAAGCCTAAAACGGAGGACCTGTTCTGGGAGCAGCACGTGGGCCCGCACCAGCTGCAGGCGGGCGCGCCCGGCGCGGCGGCGCCTAAGGACATTAAAGAGGAGGCCCAAGACGAGGACCAAAAGGAGCTGGTGCCCAAACTAGACATACTCATAGAGGAGGTGAAGGTGGACTTTGACGACTTTACGGTCAAGCGCGAGCTGTCGGACGACGAGCTGCCGGCAGACGAACCGGGGGACGCGGGGGACGGGCCGGGGGATGCGGGGGACGCGAGGGATAGACCGGAGGACGCGGGGGAAGGGCCGGGGGCCGAGATGGATGTCAAGGACGAAGATAGCCAGTCCGACGAGGACTACTTCCCGTCCAACACGTGGGCGGCCGCGCAGGCCACGCCGCCGCGCGCGGCCTCGCCGGCGCCCGCGCGGCGCGGCGCGCGCGCCTGCGGCGTGTGCCACAAGAGCATCAGCACGGCCTCGTACATGCGCGTGCACATGCGCACGCACACGGGCGAGCGGCCCTTCAAGTGCTACCAGTGCGGCCGCGGCTTCATCACCAGCAGCAAGATGCATCGCCACGTGCTCACGCATGCGCAAGATAAAGATCTCAAGACGGAAGGAGAAGACACCAAACCGGAAGTGGATGACGAAGCCGAGGACCAACAGGAGGGAGATGGCGCTAAAAAACCAACGAAGAAGAAAACCAAAATGAAATCGAAGCCGTCAAAGCTGAAGAGTAGCGAGGAGAAGCCGCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACCTGAACATGCTGGAGGTGCACCGCCAGTCGCACGCGGGCGAGGCGCTGGTGCGGCGCTGCCACTTCTGCCTGCAGGAGGCGCCCGGCGACGCCGCGCTGCGGGCGCACGAGGCCCAGCACCAGGGCGCCAAGCCCTACCTGTGCACCGTGTGCGGCAAGGCCTACAAGAAGCGGGAGACCATGGTGTACCACAGGAAGCGCCACGCGCCCGACAAGGAGTTCGTGTGCGACGTGTGCTCCAAGCGCTTCCCGGCCGCCTGCAAGCTGCACAAGCACCTGCTGACGCACCGCCGCGACGCCTTCGTGCTGCGCTACGAGTGTCCCGTGTGCGCGCACATGTTCCACACGCGCTACCACGTGCACATGCACCTCAGCACGCACCAGAAGGAGGGCCTAATCTTGGAAGAGAACCGCAGCGAGATCCTGGCGATGGTGCTCCAGAATGCGCGCAAGATCCCGCGCGCGGGCGCGGCGGGCGCGGCGGGCGCTGCGGGCGCTGCGCAGGCGCAGGCCCTGGCCGCGCAGGCGCAAGGCCTCGCCGCGCAGGCGCAGGGCCTCGCCGCGCCGCCCGCGCCCGCGCTGCCGCCCGACGAGCGCTCGCGCGTGTGCAACATCTGCGGCGCCGTGTTCTCGCACTTCTACTACCTCGAGGAGCACCTCAAGAGCCACGGCTCGCGCATCGCCGTCGCCGACCTCGACAAGCCGGAGGAGAAGAAGTACATCTGCCAGGTCTGCAACAAAGGCTTCAAGCTGCACTACTACCTCAAGCTGCACAGCTTCACGCACTCCAAGGAGAAGCCGTTCATCTGCCAGCAGTGCGGCAAGGGCTTCATCACGAAAGGCAAACTGAAGAGGCATCTGGAGACCCACACGGGCCTGAAGAAGTACCAGTGCCACATCTGCTACAAGTTCTTCACGCGACCCAGCTACCTGCGCATACACGTGCGCACCATACACGGCACGCAGGATTACAACTTCAGGTTCGACAAGGGCTACGGGCTCGGCTCGCTCGCTGTGTCGGCTATGTCCATGTCGGATGTCAGTCAAAATAGTATTTAA
Protein Sequence
MNHTAAAIPENMDVDPLSSYEYPAYDSYAAQSYPYPSKLQQSIYQAYQQTNVNYNNTQPAQPQEPFNNPPPTSQTSIDIEIPLKTEDTDPKPVLKKRKKEKDSQKSTYCSEKITDATFKFYGCSVCNISYNALHDLDQHVTVHKNRMTSYRLRLRNQFKKKQIKKEKKRLNKKIKIKKETEFEIEIKPEDGYIGEEKATDVISNGINPDSECKGNINNENGAIEAQNSQINTNNDANSISNNPQNNETNSLSNGKINENSEMENANSMNSKDKENSMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICYKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLLAPELAELDNKPKTEDLFWEQHVGPHQLQAGAPGAAAPKDIKEEAQDEDQKELVPKLDILIEEVKVDFDDFTVKRELSDDELPADEPGDAGDGPGDAGDARDRPEDAGEGPGAEMDVKDEDSQSDEDYFPSNTWAAAQATPPRAASPAPARRGARACGVCHKSISTASYMRVHMRTHTGERPFKCYQCGRGFITSSKMHRHVLTHAQDKDLKTEGEDTKPEVDDEAEDQQEGDGAKKPTKKKTKMKSKPSKLKSSEEKPRRKHQKRPHACEYCNQKFLHLNMLEVHRQSHAGEALVRRCHFCLQEAPGDAALRAHEAQHQGAKPYLCTVCGKAYKKRETMVYHRKRHAPDKEFVCDVCSKRFPAACKLHKHLLTHRRDAFVLRYECPVCAHMFHTRYHVHMHLSTHQKEGLILEENRSEILAMVLQNARKIPRAGAAGAAGAAGAAQAQALAAQAQGLAAQAQGLAAPPAPALPPDERSRVCNICGAVFSHFYYLEEHLKSHGSRIAVADLDKPEEKKYICQVCNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGLGSLAVSAMSMSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00121693;
90% Identity
-
80% Identity
-