Dlab009575.1
Basic Information
- Insect
- Dryobota labecula
- Gene Symbol
- Zfy1
- Assembly
- GCA_947523025.1
- Location
- OX383301.1:1293231-1306106[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.15 14 7.0 0.9 2 23 247 268 246 268 0.96 2 18 0.16 15 6.9 0.3 6 23 280 298 280 298 0.95 3 18 2.5 2.3e+02 3.2 0.2 3 23 310 331 309 331 0.92 4 18 8.1e-08 7.4e-06 26.7 1.0 2 23 354 375 354 375 0.97 5 18 1.7e-05 0.0016 19.4 2.6 1 23 381 404 381 404 0.96 6 18 0.0047 0.43 11.8 0.0 1 23 410 432 410 432 0.97 7 18 1.5e-06 0.00014 22.8 2.0 1 23 438 460 438 460 0.98 8 18 0.42 39 5.6 3.5 1 23 587 609 587 609 0.95 9 18 0.00041 0.037 15.1 2.0 2 23 616 638 615 638 0.92 10 18 4.3e-06 0.00039 21.3 1.5 1 23 644 666 644 666 0.98 11 18 1.3e-06 0.00012 23.0 4.4 1 23 672 694 672 694 0.98 12 18 9.7e-05 0.0088 17.1 0.2 1 23 700 722 700 722 0.98 13 18 0.00025 0.023 15.8 0.5 1 23 728 750 728 750 0.92 14 18 0.017 1.6 10.0 0.0 1 23 820 843 820 843 0.93 15 18 0.00012 0.011 16.7 1.6 1 23 849 871 849 871 0.95 16 18 2.7e-05 0.0025 18.8 0.1 1 23 877 899 877 899 0.98 17 18 0.0003 0.027 15.5 0.0 1 23 904 926 904 926 0.96 18 18 0.00059 0.054 14.6 4.2 5 23 935 953 932 953 0.96
Sequence Information
- Coding Sequence
- ATGAATAATGAAACCGAACAAATATTTTTACTAAATTCTGCCCCGAGTCAGTCTTCGGCCCCCTCGCAGACGATGGGCTCCTTGGCACCTTCGCTCAAATCGCAGAGTAACCTTGATAACGTCCGAGACTTCACGAATGTGTGTCGGACATGCGCCACCATCACCGAGTTTGTTATGCCCATATACAGTGGAGATGGGCTTCAGAACAAATTGGCTGATAAAATAAAGAGACACTTACCAATACAGGTACGGGAGAGCGACGAGCTACCTTTGGTGGTATGCTACCAGTGTGCGAGTACGTTACTAGCATGGCATGAGCTGGTGAAGTGTTCCATACAGGCTGACGCTGCCCTGCGTGCGAAGATTTGCTCCAACCAAAGGAAAACAAATCCACCTAATGTTACCATTAAATCAAGTTCAAGTGTAGAAGATGAAGCACAGAGCAAGTTGTTTCACACGAGTGTCAGAAATGCTCTCATTGACTTTCATATTGATCTGGATGAAGATAATACGGATGTAGAGTTTGTTTGCCAAAAGTGTGTGGAGAAGCCGGCACTGACCAGTGTGCACAGCCTCGCTGAACATATCCGTCACAACCACTCTCCTGACACACTCAACAATACTGTTAAAACATTCATCACCAACTACATAACGTTCGAACAAGTGCTAGCGGAGGATTCTGACAGAGAAACACAATCAGCCACTAAAGAGAAGTCTCAAGTAGTTCTGCCGATCCTGCACTGTCCGTTCTGCGCGAGTGTGTTCTCTTCGGCCACGCGGCTCGTCTACCATCTCAACAAACACGTGGAAGTGAGCATGGCGGCCGGCGCCATGTGCTGTGACCTAGTCTACAGCGACAAGAAACACTTCGTGCAACACTTGCAAGAGGCACACGTCGATAGGACAGCCGACGAGCCAGTGCCAGTTTGCGTCAGCTGTGGCTTCACCGCAGAACATGCCGAAGAAATGAGACAGCATTATAAAGACGCGCACAACGATGTGAAAAGTGCGAAAGAGAAGAAAGTAGAGAGTCCAAACAACCAGAAGTACATCCCAGCGGTGTGCCCCGAGTGCAACAAGACGTTCTCCAACAAGTATAACATGTTCGCGCACATGCGCAGTCACTCGCACACCGCGGTCTACCCGTGCGACAAGTGCACCCGGACCTACCGCAACCAAGGGAACCTAACTCATCACAAGAGGCTTGCGCACGAGGGAATACTCAAATTCATATGCGTCGAGTGCGGAGAGGCGTTCCCCAGTCGGTCGGAGCGCGACATACACGCGCGCATACACTCGGGAGAGACGCCTTACAAGTGCCCGCACTGCGGCAAGTCGTACCGCGCCAAGAACACGCTCACTCGACACCTCGAGATACACGCAGACATACGCAAATACGAGTGCGAGACCTGCTCCAAAAAGAGCCCCTGCGACTTGCCCGAGGATCTCCGCAGTGCCCCCTCTGACCTGTACGAGCTGTCCGATGACGAGCCGCTGGCCACGTTCGCTACCAAAAAGCCCGCGAAACTGTATACCAACTTCTACAGAGCACTCGTGAACTTTAGAGAGCATTTTATTAGTGATCAACATCATGAGGATTATCCTAACTTCACCGACTCGAGTGTGTCTGACGCTGAAGAGAATGAGGTCGATAGGTTCGACGACCTGACGCAGTGCAACATGAGGCGAGACAGACTGGACGAGGAGACGAGGCTAGAGCTGAGAGAAGTGCAGAACAAAATCGACAACAAGACGTACTACACGTGTAAGATCTGCAGCAAGAACCTGAGCTCTGCGCACACGTACCTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGCCTGCAACGCCACCTCACGGAGACGCACGAGCGCGTGCGTCGGTACAACTGCTCGCTCTGCACCAAGAACTTTGCCAACTCACAGAACCTCAAGCAACACTTGCGGATACACACCGGAGAGAAGCCTTTCGTGTGTTCTCACTGCGGGAAGAGGTTCACCCAGAGCGGTTCGTTACATGTGCATCTGAAGACACACAGTGAACAGTTTCCTTACGAGTGCGCGGAGTGCGGGGCTAAGTTCAGGCTGCGCTCGGGACTGGCGCGGCACAGACTGAAGCATACGGGCGAGCGGCCGCACGCGTGCGCGACGTGCGGCAAAGGCTTCCGCCAGCGCCACGAGCTGGCCGCGCACGCGCTCGCGCACGCCGGCGCGGCGCCGCACGCGTGCGCGGCAACGGGAACGCCGGCAGAAAGCGCCCGAGCAGACCAAGCGAAAGTCGAAACGCTGCAGAAGCCGGAGTTCACGCTAAGCGAGAAAGGCAAGCGGTACGCGCGGTGCGGCGCGTGCCAGAAGAGCGTGGCCGCGGGCGCCTGGGCGCGCCACGCGCGCGCGCACCGTGGCGAGCGCCGCCACAGCTGCGCGGCGTGCGGCTTGGCCTTCGCGGACGGCGCCAACCTGGCGCGCCACGCGCGGGCCGTGCACGCGCGCCTGCGCCCGCACGCCTGCGGCGCCTGCCCGCGCACGTTCTCGCGGAAGGCTCACCTGGAGGACCACGTCAAGTCTCATTCCGCAAGCAGAGCGTTCGTGTGCGACACATGCGGCAAGGCATCCAAATCGAGCGCCGCACTTCGCATGCACGCGCGCACGCACGCCGCGCGCCGCTTCGCGTGCGTGCAGTGCGACGCTAGCTTCAAGCGGCGCGGCGAGCTGGTCGCGCACGTGTCTGTGCACACCGGCGAGAAGGCACACGTCTGCCACTGCGGGAAAACTTTCCGATTGCGAAGCCAGCTGACAGCACATACTAGAGTGCATCAAAAAACACAGGAGCAGGAAATCGAAGACCTAACCAATGCTAGCAATACACTAAGTTTTTGTGAAGACGAAATTCAATGA
- Protein Sequence
- MNNETEQIFLLNSAPSQSSAPSQTMGSLAPSLKSQSNLDNVRDFTNVCRTCATITEFVMPIYSGDGLQNKLADKIKRHLPIQVRESDELPLVVCYQCASTLLAWHELVKCSIQADAALRAKICSNQRKTNPPNVTIKSSSSVEDEAQSKLFHTSVRNALIDFHIDLDEDNTDVEFVCQKCVEKPALTSVHSLAEHIRHNHSPDTLNNTVKTFITNYITFEQVLAEDSDRETQSATKEKSQVVLPILHCPFCASVFSSATRLVYHLNKHVEVSMAAGAMCCDLVYSDKKHFVQHLQEAHVDRTADEPVPVCVSCGFTAEHAEEMRQHYKDAHNDVKSAKEKKVESPNNQKYIPAVCPECNKTFSNKYNMFAHMRSHSHTAVYPCDKCTRTYRNQGNLTHHKRLAHEGILKFICVECGEAFPSRSERDIHARIHSGETPYKCPHCGKSYRAKNTLTRHLEIHADIRKYECETCSKKSPCDLPEDLRSAPSDLYELSDDEPLATFATKKPAKLYTNFYRALVNFREHFISDQHHEDYPNFTDSSVSDAEENEVDRFDDLTQCNMRRDRLDEETRLELREVQNKIDNKTYYTCKICSKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCSLCTKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEQFPYECAECGAKFRLRSGLARHRLKHTGERPHACATCGKGFRQRHELAAHALAHAGAAPHACAATGTPAESARADQAKVETLQKPEFTLSEKGKRYARCGACQKSVAAGAWARHARAHRGERRHSCAACGLAFADGANLARHARAVHARLRPHACGACPRTFSRKAHLEDHVKSHSASRAFVCDTCGKASKSSAALRMHARTHAARRFACVQCDASFKRRGELVAHVSVHTGEKAHVCHCGKTFRLRSQLTAHTRVHQKTQEQEIEDLTNASNTLSFCEDEIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230874;
- 90% Identity
- -
- 80% Identity
- -