Basic Information

Gene Symbol
arid5b
Assembly
GCA_947523025.1
Location
OX383312.1:688451-704809[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-14 3.3e-11 44.1 0.0 3 89 228 301 226 301 0.90

Sequence Information

Coding Sequence
ATGCAGATTGATGACGAAGTACTAGCCATCAACGACAAGGTGGTCCTCCGCGCAGACGACCTGCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGCTGGGGTCTGCGGGCAGTATGGCGCGGCGCCTGCGCCCCTCCGGCTGACCTGCCCCGCCACGCGCCGCTCACGCATACCAAACTGGACTTCAGTGACGTTGATAGTGAGAAGAGTTCTATTGTGCTGGACACAGACGCTCCAGGGGTGGTAGTCTTCTCCTACCCGAGGTACTGCCGCTACAGGGCGCTCATAGCCAGGCTCGAAGGTATACAGGCGTCATGGCTGCGAGACTCTTTGGTGGCAGCACTAGGAGGGTACGCGGCACCGACCAGTAACACCAGGATACTGTACTGCAAGGACACGTTCGAGTACCCCGAGCTGGAAGGGCACGAGTTCGTGTGCAACCACATGGCGCCGCGCCTCAAGGGCCGGCCGCGCGGGCGCCGGCGCCGCGCGCACTCGCCCGCGCGCTCGCCCGCCGGCCGCGCCTCCGACCGCTCCGACTCCGACGAGCCGCCCGCCGCGGCGCCCGGCCCCGCCAGTGGCCCGCCGACTCCCCGCCGCTTGTCCCTCCGCAACGGCGCCCCCCCTCAGAGTGACGAGGAAGAGGAGGAGTACAAGCGAATAGAACAGACCCCCGAGGACAGAGCCTTTCTTCAGACACTGAAGATGTTCTACAAGAGCAGGAGCGAGCCCTTCAAGAGTGGACACACTCTGAAGCACTTATCTCTCCGCACGCTGTACATGTCGGTAGTGTCGCGAGGCGGCTACGAGGCAGTGTGTCGTCACAAATTGTGGCGTGCACTCGCCCGCGACCAGCCCGCGCGGACCAGGAGGCATTATGAGAGATTCCTTCTCCCCTTCGAGAACCACGAGCGACGCAAAGGCTACCCGCTCAAACCGAACGGCAAGCTGGACGCAGAGCCGCGCACCATCGCCACCATCGACGTCACCGACTCCCCGCGACGAGACGACAATATCCTGCGCACTCCCTCTCCCGGCCCCAAACTCGACAACTACGACAAACTCGACACTTTCGACAAACTCGACCAGCTCGGAATCGACAGCGAAACCGGGGAAATAACCACCAAAGATGAAATTATAGTCAAAAACGCCGAAGAGCTCAACAGAGAATTCTTAGACTCTCTACCGAAAGAGGAGAAAACGGTTAAAATTTCGGTGAAACCGGTCGAGAAGCTGATCGAACCGGTTAAGGTTTTTGAGGGCTTGCATGTGTCCAAGTTGGAGGTGCAGAAAGATGAGGGGAGGGATTTTAGTCAAAACTATTTGAGTGATATGCAGAAATTTAATATGGTAGCGGAGTCCCTATCGTCTCGTGCGACGCCTCTCAACGGTCACGCCGCGCCTGCACCCACTGACCTTAAGACGTCCCGGCCAGTCGGGCGCAGCTCCTTACGCGCAGTGCGCGTGAAGCCCACGCGGCCGCACGCGCAGCTCACGCCCGCCAGCACGCCCCCTCACCCGCCGCGCCCGGAGCCCGTCCCGGCGTCTCCGCCCGTCACGAACTTCGGCATCCACCACCCACCGCCCTGCGCACAGCACGACGACGACATCGTCGAGGTCCCCTACAAACCCAAAACCCCAGAAATTATCGACTTGGACGAGTACCCAGAGAGCCCCCAAGCAGTGAAAAAGAAGAAACTCGACATCCTCAAAGAGCGAGGCCTCGAGGTCACAGCCCTGCCGGCTCCCTGGCAGGGCGTGGGCCCTCACATCATGGGCCCCCCCATGCTCCTCAACCCAGCCGTGCAGCACCAGATCATGACGCAAGCACAACTCTTCCAAATGTACAACATCATCCCACAGAACTATGCCAACGGTATCCAGCCTCCGAAAGTCATCCAAGCGTCTTCTATCTTCGGTAACACAGGGCCTGAAAAGACTGTCTATGGCAACCCCAAGGATCCCTTCATGCCACCACCTCATGTTCTTCACGGAGTGCCAGTTAAACCTTTAAAGACTGCCCCAACTCCTACCATTCCTCAGGATATACTAGACCTTACCTGCAAGTCTTCAAGCCCCCCTCCGCAGAAACCTGCAGTCGAAATAGTAAGGGTCCCCCCCTCCCTCTCTCCAACAGCACAGAATTTAACAAAGAATTACACTTTAGTCGACGGAAAAGCAGTCGTCGGATCGAATTTAGAAATTACTTTAGTCAATAAAGCTTCAAGTCCCGGCAAAAATCGGCCTCCACAGAAAAGGTCGAGCAACGGAAAGTTCATGTCGGCTAAAACTCCTACCCCGCCTAAGGAACCCTACCCTAAGTACACTTCGCCTACCACTACCCAGAAAAAACCACCTATTAACATCCCCAACTACCAAATTAGAGAAGATTCTTCTCCTACCCAAAGTCAGGTTCTGCAAAACGCAATGAAAAATCAGAATCTAGCTCAAATAATGGATTTGCAAAAGAACTCAGTTCCTATGACGTCTTTCATGGACCCTTACGTCGCTTTATACAGCAGTTTGGCCGGTCAAATGGACCAGAGACAACTGGCTATGTACCGAGACCTTATGACCAATCAATTTAGATACCCAGGACTTCTAAACCTTGGCGTAGCAACACCGACAACGAAAAATTAG
Protein Sequence
MQIDDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDSEKSSIVLDTDAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHMAPRLKGRPRGRRRRAHSPARSPAGRASDRSDSDEPPAAAPGPASGPPTPRRLSLRNGAPPQSDEEEEEYKRIEQTPEDRAFLQTLKMFYKSRSEPFKSGHTLKHLSLRTLYMSVVSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRKGYPLKPNGKLDAEPRTIATIDVTDSPRRDDNILRTPSPGPKLDNYDKLDTFDKLDQLGIDSETGEITTKDEIIVKNAEELNREFLDSLPKEEKTVKISVKPVEKLIEPVKVFEGLHVSKLEVQKDEGRDFSQNYLSDMQKFNMVAESLSSRATPLNGHAAPAPTDLKTSRPVGRSSLRAVRVKPTRPHAQLTPASTPPHPPRPEPVPASPPVTNFGIHHPPPCAQHDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPAPWQGVGPHIMGPPMLLNPAVQHQIMTQAQLFQMYNIIPQNYANGIQPPKVIQASSIFGNTGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTAPTPTIPQDILDLTCKSSSPPPQKPAVEIVRVPPSLSPTAQNLTKNYTLVDGKAVVGSNLEITLVNKASSPGKNRPPQKRSSNGKFMSAKTPTPPKEPYPKYTSPTTTQKKPPINIPNYQIREDSSPTQSQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00905897;
80% Identity
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