Basic Information

Gene Symbol
Jarid2
Assembly
GCA_947523025.1
Location
OX383283.1:3652059-3683383[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.6e-20 9.2e-17 61.8 0.1 8 89 1011 1089 1005 1089 0.90

Sequence Information

Coding Sequence
ATGATTGGCGCGTTTCAACAAGCAGTCAAGTGTTCAGTCACCGAAAACGGTCTGCGGCCGAATACGGCTAACCGAGAATCTGTTTACACTATTCGGGTACGTTCTCGTCGCGTTCAAGCACAGCGTAAGTTCGCGCAGGGCGCTTACGTGCCGCCGAATGTTGTCCCCGCCGCTGCTGCCGACAACCGGCGGGACGCCGCGCAGGATCCAAGAAACGTCACCATAAACAACATGACGGCTACGGGCTTATTGGACGTCGTATCTTTACAGAGTCACTTCCATTTGACACAACCTGTAGTGATCCTTGAGAGGCTGGGCGCCCGGAACCCGGCCTGTGACGTGTCGCCGCCTTCGCAGAGAGAGACTTGCGAACCACAACCCTCAGTTGACCCCCATGAACGTGTGAATAATAATTTGCCCACTATCAAGAAACCTGCTGTACCAAAAAAACAGTCTGTTAAAAAAAAGAAACAATATAGACGAGAACATCAAATGACACTTAGAGCTCGGGGCCAGAATAACCCTGAAAACAAAGCGGAAAAATGTGCTCCTGTCAGAAAGGCCTCTAAGCGCAAGAAGATGTCTTCTGACGAGGATGAACCCCTCATTTTTCAAAAGGCTCGCCTAGAGCAGACAGCAAAACAACCAAGCACTTCAAAACAACCAAGCGCTTCAAAACAACCAAGCACTTCAAATCAACCAAGCACTTCAAAACAGACTGCTGCAACTGAGAGCTCTCCCATGGAAGAATCTCCTAAAAAGCGACCTAGCAAGAAGACAACTGAAACGGAGATCATCATAAACGAGATCACCACCGAGAAAACCGGTACAGTAGAGACCACTACAAAGACAATCACTAAAAAGAAGATTGTCACAAACGAGAGCAGTTTAAAGGAGACTCGAAGAAATGCCGAGCAAAGAACCGGTATGGACAAAACTCCCACAAAGAGGTCTTTGCGGAAGAATGTCGCACGCGAGTTCTCCTTACTAGACATCCCCTTACCGGATGTCGAATTCAGCTTCATGGAGGATGACCTCACGAAAGATACATCCATCCGGGACCATCCGGATAACTTGGTTACCGAAGATGACACAGTTATCCGAGTTGTCCCGAGTGACCCGCTAACCCCAGTTGTCCTGAATGATGTCACTGCTCTAGACATCCCAGTCGCCACGGATGACCCAGTTGTCCTGCCCGTCCCGGTGCTAAATAGTGAGAATGAAAGCTCGGCAAGTACCCCGGGTACTGTTTTGGATAGAGTACTGGCGCCGTTAGATGAGGTGTTTGCGGATGAGGGTATTGGTATCCTGAAGGACGATAAACTGGTGATTTTGCATTATGTACCGATGGTCAACGATGATGATACGGAGGACACGTGTGACCCGGATGATCCATTTATCACGAGTGCAATGACGATCGAGGATGACGTAATGGTCCCGGATGACGTAATGGTCCAGGATGACGTAATGGTCCAGGATGACGTAATGGTCCAGGATGACGTAATGGTCCAGGATGGCGTAATGGTCCAGGAAGACGTAATGGTCCAGGAAGACGTGATGGAACAACCGATAAAGAATCTACAAAAAGCTTCTCCGGAACCTGGACCAAGCGGCATGCGGATGCACACGACAGCCAAAAATAAATCTGGAAATAAAGAATACGTCGCGAACTACAGTGATCACCGTATATCCTTAGGAAGCGACGTGGATGAGCCGTTTCTTAAAGGATTCTCGCAAAATACTGCCGTCAATGTTGAACGTGGTCAAAATGATCAGTTCGAGCTGCTGACGACTTGCATCGCGGAAGAGTGGCGCTCTGACCAAGACGTCATAAACGCGTCTCAGGAAGCATTGGACTCCCGCTGCAAAGTTTGTAAGCCCTGCATCAGGATTGAAAAACTGATGAAAGTTTCGAGTTTACTCAAATGTCAAATTGAATTAACAAGCAAGGGACAGGAAACCAATGCCGCGGGTCCAGAGAATGAACCAACGGAAAGAGAAGGTGACACTGAAGAAGTCGATATGGAAATAGACAACGAAGACACTGATTCGACGAACGATGACCAAGGTCATCTTTACTTGTTGTTACCAAAACATTCTTTTGTAATGTTAAAATTACGAACCAGAATGGTACACGGTAAAGAGGTCTTGGGGGTTCGTTTGATGCCGAGAGATGGGTCTCTCAAAAACAATCAAGAGTTCTCACTCGAAGAACAAGAACATTTACTAGATCAACTTATCGAGACCCTGACAATCGGTCGAGATGTCAATTTAGAGGAGCAAAATGAAATTCCGGAGAGTCAAACTATAAGCATATCATCCGACAGTACTGCCGAGATGAGCGATGCTACTAATGATCAAGATATGTCATTCCGCCATACAGCCAAGAATAGAAAAATAAAACGATTAGTTAAAAGGAAGTTAGCTGAAGCGGAGCTGATGCACGATCTCATGCGAGAGGAAAAGGAAAGAGAGATTGCCCGCCTCGAAGAAGAGAAGAGACAGGAAATATCACGGATTATGGCGGAGAAGAATATCGTTGTCGCAGAGATGTCTCGCTACCAAGAGCGGTGTACCCAGATGGCGAAGGAGAAAGAAAGAGATTTTGCTCGCCTCAAGGTGGAGATCAGAGCCGAAATGATATCTAAAATAGAGGCTGATCGCCGCATGTACGCTGAAGTCGACGGCATGGCAGAGGACCTTGCCAAAGAAAAAGATGCCAAGAAAATGGATCAGGAAGAACTTGCAGATCAAGATGCACCTGGCACCAGCAGTTCCTTGCTGACAACGGATGGCGGGTTTCTAGTAGATGCTCCTGTATACCACCCTAGCGAAGAAGAATTTCGTGATCCATTTCGCTTCTATGATAAGATCTGGTCAGAAACAGTTAGATATGGCATCTGTAAGGTAGTGCCCCCGCCTGGTTGGAAGCCACCCTTCAGAGTGCATGACGAAATGAGGTTCGATGTTACGAACCAATACATTTCGCGACTGTTCAGCCGCTGGGGACCGGCTGCGAGAGAACTTAGCGCTATCAAGTTGTGCCTCGCGCAACAAAAAGTTAATTTTACACGAGCACCATTGCTGGATGGTGTCGAGGTAAACTTACCGAAATTATACCACCTCGTGCAACGGCACGGCGGTCTAGAAACAGTATATAACAAGAAGCGATGGGGCAAGGTCGCTGAAGATATGAAATTTAATAGAGGACCTAATACTGAGAGGAAACTCGACCAGATTTACGTAAAGTATCTGCTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATAATGCGGAAAGTCGAGATCGCATGGAACCGAAAAAATCAAAAGCTTTTGGACCGCGCCGTGAACCCGCTAAACCGCCAGAAGCGATTGCTTGGCTTATTGGACTCTTCTGACGATGAGACAGAAGACGAAGACACGGTGGCCGCTGTCAATGAGGCAGAGGACTGTATCATCAAGGGCGCGGTTATGAACCGAGCTAAATTTAAAAAGGTTATTAAAGAGCCCTTCGGCCCACAGATTGCCACCATGACGTACGAGAACACATTCGGACCAGGCTCGGAGGCCGCCGACCCTCCCGATTTGGTCAAAATCGAGGAGTATTACTGGCGTCTCGTGACGCTGGGAACTGAGCACGTGTGCGTGCACACCGCGGCCATTGACACCGGCGAAGAAGGCTACGGCTTTATCAAAAATAAGTCTGACTCCTATGGACGCCACCCTTGGAATCCTAAGATGGTTACCCAGAATCCTCGCAACGTGCTTCAGTATTTGGGTCAGGTGTTGGGCGTAACGGTGCCCACTCTGCTTCTAGGAATGCTATTCTCGACCTCCTGCTGGCACAAGGATCCACATGCAGTATCGTGGCTGGAGTACCAGCTCTTAGGACCTGAAAGGATCTGGTACGGCATCCCAGCACATCAGGCGGATAATTTCAGGAAAGCTGTAGAAACTCTTTGCCCGACATTTTGCCAAAACAAACGTCTGTGGATGCCGTCGGACATCACGATGATCCCGCCGAACTTACTGCGTGAGCACAACGTGACGCTGTCGCGCGTCACGCAAAGGGACGGCGAGTACATCCTGGCCTTCCCGAATGCCTACACCTGCTGCATCAGCACCGGCTACACTGAATCGGAAAGTGTTTATTTCGCACCGCCATCCTGGCTTGAGAATCTGTGGACAGTCTTCAAGGAGGCCCGAGAAAGTTGCGAGCCGACAATGTTCGCAATGGAACATCTGCTCTACAACATAGGCAACGATCCGAAAGCTGAGCACACTATACTGAAGATCGCCCAGCCGTTGTACGACAAGATGTTGCGCGAAGAGGTCACCAACAGGCAGATGCTGCAAGAGCGGGGACTGCCGTTTGTTCAAGAGTTACTGAGCGCCAACACGTCACGTAAGAAGAACAAAGCGAACCCGTTCAACCCGCGCGATCAAGACGAGTGCGAGTACTGCAGGGCCACGTTGTACCTCTCGAAGGCAAGTTCACACACACCTCACGTAAAGGGGCTCACCGGGAAAAATACAGTCCTATGCCTAGAACACGCACTTAAATTACTTGACAGTGAAAAATATAAGGACAGGGACGTAGAGCAACTACAAGTTCTGGTGCACGTGAGTGTGAAAGAACTTAACACCGTGCACGACGACATGAAGCGTCGCCTCGGCATCCCGATCGCCTAA
Protein Sequence
MIGAFQQAVKCSVTENGLRPNTANRESVYTIRVRSRRVQAQRKFAQGAYVPPNVVPAAAADNRRDAAQDPRNVTINNMTATGLLDVVSLQSHFHLTQPVVILERLGARNPACDVSPPSQRETCEPQPSVDPHERVNNNLPTIKKPAVPKKQSVKKKKQYRREHQMTLRARGQNNPENKAEKCAPVRKASKRKKMSSDEDEPLIFQKARLEQTAKQPSTSKQPSASKQPSTSNQPSTSKQTAATESSPMEESPKKRPSKKTTETEIIINEITTEKTGTVETTTKTITKKKIVTNESSLKETRRNAEQRTGMDKTPTKRSLRKNVAREFSLLDIPLPDVEFSFMEDDLTKDTSIRDHPDNLVTEDDTVIRVVPSDPLTPVVLNDVTALDIPVATDDPVVLPVPVLNSENESSASTPGTVLDRVLAPLDEVFADEGIGILKDDKLVILHYVPMVNDDDTEDTCDPDDPFITSAMTIEDDVMVPDDVMVQDDVMVQDDVMVQDDVMVQDGVMVQEDVMVQEDVMEQPIKNLQKASPEPGPSGMRMHTTAKNKSGNKEYVANYSDHRISLGSDVDEPFLKGFSQNTAVNVERGQNDQFELLTTCIAEEWRSDQDVINASQEALDSRCKVCKPCIRIEKLMKVSSLLKCQIELTSKGQETNAAGPENEPTEREGDTEEVDMEIDNEDTDSTNDDQGHLYLLLPKHSFVMLKLRTRMVHGKEVLGVRLMPRDGSLKNNQEFSLEEQEHLLDQLIETLTIGRDVNLEEQNEIPESQTISISSDSTAEMSDATNDQDMSFRHTAKNRKIKRLVKRKLAEAELMHDLMREEKEREIARLEEEKRQEISRIMAEKNIVVAEMSRYQERCTQMAKEKERDFARLKVEIRAEMISKIEADRRMYAEVDGMAEDLAKEKDAKKMDQEELADQDAPGTSSSLLTTDGGFLVDAPVYHPSEEEFRDPFRFYDKIWSETVRYGICKVVPPPGWKPPFRVHDEMRFDVTNQYISRLFSRWGPAARELSAIKLCLAQQKVNFTRAPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEDMKFNRGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRAVNPLNRQKRLLGLLDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKVIKEPFGPQIATMTYENTFGPGSEAADPPDLVKIEEYYWRLVTLGTEHVCVHTAAIDTGEEGYGFIKNKSDSYGRHPWNPKMVTQNPRNVLQYLGQVLGVTVPTLLLGMLFSTSCWHKDPHAVSWLEYQLLGPERIWYGIPAHQADNFRKAVETLCPTFCQNKRLWMPSDITMIPPNLLREHNVTLSRVTQRDGEYILAFPNAYTCCISTGYTESESVYFAPPSWLENLWTVFKEARESCEPTMFAMEHLLYNIGNDPKAEHTILKIAQPLYDKMLREEVTNRQMLQERGLPFVQELLSANTSRKKNKANPFNPRDQDECEYCRATLYLSKASSHTPHVKGLTGKNTVLCLEHALKLLDSEKYKDRDVEQLQVLVHVSVKELNTVHDDMKRRLGIPIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-