Druf008629.1
Basic Information
- Insect
- Drymonia ruficornis
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_947859195.1
- Location
- OX401928.1:8380861-8383332[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 18 1.6 1.5e+04 -3.8 1.1 9 12 161 164 160 164 0.70 3 18 0.012 1.1e+02 3.0 0.5 4 10 169 175 168 176 0.97 4 18 3.1e-07 0.0029 17.7 15.9 3 19 186 202 185 202 0.95 5 18 3.6e-08 0.00033 20.7 14.2 3 19 239 255 237 255 0.91 6 18 0.76 7.2e+03 -2.8 2.2 6 10 280 284 279 284 0.83 7 18 4.7e-09 4.4e-05 23.5 11.4 1 19 290 308 290 308 0.99 8 18 1.6e-06 0.015 15.4 18.3 3 19 345 361 344 361 0.93 9 18 2 1.9e+04 -5.3 2.2 5 10 384 389 384 389 0.88 10 18 5.9e-06 0.056 13.6 18.3 1 18 395 412 395 413 0.97 11 18 8e-09 7.5e-05 22.7 16.9 1 19 422 440 422 440 0.99 12 18 0.00016 1.5 9.0 6.1 9 19 488 498 486 498 0.89 13 18 0.051 4.8e+02 1.0 8.4 3 12 509 518 508 518 0.87 14 18 0.35 3.2e+03 -1.7 3.6 14 18 547 551 547 552 0.87 15 18 0.095 8.9e+02 0.1 0.5 7 12 567 572 567 579 0.83 16 18 3.2e-06 0.03 14.4 4.7 1 11 588 598 588 599 0.97 17 18 7.5e-05 0.71 10.0 12.6 4 18 630 645 628 646 0.85 18 18 2e-05 0.19 11.9 13.5 1 18 687 705 687 706 0.90
Sequence Information
- Coding Sequence
- ATGGCTCGCCGGTACAGAGACGCCGCGGCGAAATTGCAGCAAAATGTACAGAAACATTTAAAAGGAATGAAAGAACTTTCATCATCAGAAGATGAAGAACCTTGCGAGGCCAGTGTCTTGGACGGAGTCTTCCAGAGCTACTGGCGCGGCGGCGGGGACACCAAACTGCTGAACAGAACCAAGAACCTTCTTGAAGAGGCGATGAGCGGCCGCGCGGTAACCTGCCTCATATGCATAGGTTCCATAAAAAAAACTGATGCCATCTGGACTTGCGACCACTGTTACTCCTATTTCCACCTATCCTGCATTCGGAAATGGTCGAACGACAGCATCAGCCTACGTAGCGAAGAGACCCAAGCCCCTATATCTGTTTATAAGCCTCAGAAAATAGAATGGTGTTGTCCGAAATGTCGCAATTCGTATTCTAAAGAGGAAATACCGCGAAAATATCGCTGCTTCTGCGGCAAGACCGACGACCCGCCGTGCCATCCGTGGTTAATACCCCATACATGTGGAGAAGTGTGTGCAAAAAGGTTATCTACTGGTGATAATTGTAAACATAAATGCTTGCTTTTATGTCATCCTGGTCCTTGTCCTCCGTGCCCCCAGACTGTGAATGGAGTATGTTACTGTGAGAAGGATCATAAAAGAGTGAGATGCAGCGCTGCTAAATGGTCATGCGGGCAGCAGTGCAAAAGAACTTTACAATGCCAAACCCACAAATGTGAAAACATATGCCATGAGGGTGAGTGTCCTCCATGCAGTTACACTAGTGTCCAACCCTGTCAATGTGGTACTGAGAAAGCCAAAAGACCTTGTAATGACCCATTCTGGCAATGTCAGAAACCATGCAACAAAAAGTTTTCATGTGGTTTCCATAAATGTGACAAGATCTGTCATTCAGGCAGCTGCGGCTCTTGTCCTAATTCTGGAACAAAGTCATGTCCTTGTGGAGCTAACCAACGCTTCGTACAATGCCCAGATTCGATGGAAACTTGTTTGGGCACTTGCAACAAGAAGCAGGATGATTGCGAGCACAGTTGCCCTGAAAAATGCCACAAAGGCCCCTGCCCGCCTTGTCAAGTCTTAATACAGAAGAAATGCTTTTGCTCATCACATACCAGGTCTTTACCATGCAGCAAAGAGTTTAAATGTGAAACTAAATGCCGAGGAACAAGGCCTTGTGGAAAGCATGGTTGTGCAAGAAAGTGCTGCAATGGCAACTGTCCTCCTTGTGAGAAAATATGTGACAAACCCCTCCAATGTGGTAGACATAAATGTACCAATATCTGCCACCATGGCCCATGCTACCCTTGTCCCTTGGAATCTAAGGTCACATGTAGATGCAAGGAAACATACATAACTGTTCCATGTGGAAGAGAGAGGCACACAAAACCCCCAAAATGTAGCTTACCATGTAAGATTAAATACAAATGTGGGCATGTTGAAGAGAACAAACATTCCTGCCATTTCGGAGACTGTCCGCCATGCAGGGCCATATGCTATAAGAACTATAAGATGTGCACCCATCAATGCAAAGCTACGTGCCATGAAAATGTAGCCGTAGTGTTCAAGCAAGTCGAGAAACCGGCAACTCCATGGGAAGTTCAACCTCCAAAGACTAAAATAATGACACTGGACTGTCCTCCATGTGATACTCCGGTCCCAGTGATTTGCTTTGGTGAGCATGACACTGACCAGCAACCTTGCCATTCTGCTGCACGTAGACCCTGTGGGAGGCAATGTGGACGTCCTTTAAACTGTGGCAATCACACCTGCAGTTTGCTCTGCCATTTACATCAACCAGACCCTGACTACCCAAATGTGCCTTCTAGCTGTAAGCAATGTGAAAGGGACTGTTTAGTGCCCCGACCAGCAAAATGTACTCATAAGTGCATAATTAGGGCTTGCCACCCTGGCTCGTGCCCTCCCTGTGAAATACTGGAACGGTTATACTGTCATTGTGGGCTCACAGAGGTGTACCTTCGTTGCAGAGAGATTGGTACTGCAACAGAGGAGACTCTGTCTTGTAAGCAGCAATGCCCAAAGAACATTGAATGCGGGCATAGATGCCGTAACAACTGTCATTCCGGCCCTTGTGGTAAGCAAGTGTGTACTAAGAAGACTAAAATACACTGCTCATGTGGAAACTTGAAGAAAGATGCTCCCTGTAATACTGTTAGGAGTGGAGAAGCTAAGATAAACTGTGATGAGTCTTGCAAAGCCAAAAAGATTGCTGCTAAGATAGAAAATGAGAAAGAAAGACAGAGATTAAAGGAGTTAGAAGAAGAGAGGAATAAGAGGGAGTTAGCAGAGTATGAATGGAAATTGAGTGGGAAAAAGAAGAAGTATAAAGAGAAGAAGATGGTGGTCAACAAAGATGACAGGGGCTTCTTGAAGAAGTATTGGATAGTTATATTATCAGTCATAGTAGTTATGCTAGCAGCTTCATACTATATATTTTATGTGTGA
- Protein Sequence
- MARRYRDAAAKLQQNVQKHLKGMKELSSSEDEEPCEASVLDGVFQSYWRGGGDTKLLNRTKNLLEEAMSGRAVTCLICIGSIKKTDAIWTCDHCYSYFHLSCIRKWSNDSISLRSEETQAPISVYKPQKIEWCCPKCRNSYSKEEIPRKYRCFCGKTDDPPCHPWLIPHTCGEVCAKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGVCYCEKDHKRVRCSAAKWSCGQQCKRTLQCQTHKCENICHEGECPPCSYTSVQPCQCGTEKAKRPCNDPFWQCQKPCNKKFSCGFHKCDKICHSGSCGSCPNSGTKSCPCGANQRFVQCPDSMETCLGTCNKKQDDCEHSCPEKCHKGPCPPCQVLIQKKCFCSSHTRSLPCSKEFKCETKCRGTRPCGKHGCARKCCNGNCPPCEKICDKPLQCGRHKCTNICHHGPCYPCPLESKVTCRCKETYITVPCGRERHTKPPKCSLPCKIKYKCGHVEENKHSCHFGDCPPCRAICYKNYKMCTHQCKATCHENVAVVFKQVEKPATPWEVQPPKTKIMTLDCPPCDTPVPVICFGEHDTDQQPCHSAARRPCGRQCGRPLNCGNHTCSLLCHLHQPDPDYPNVPSSCKQCERDCLVPRPAKCTHKCIIRACHPGSCPPCEILERLYCHCGLTEVYLRCREIGTATEETLSCKQQCPKNIECGHRCRNNCHSGPCGKQVCTKKTKIHCSCGNLKKDAPCNTVRSGEAKINCDESCKAKKIAAKIENEKERQRLKELEEERNKRELAEYEWKLSGKKKKYKEKKMVVNKDDRGFLKKYWIVILSVIVVMLAASYYIFYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- -
- 80% Identity
- -