Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401928.1:7894804-7906700[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.7e-05 0.0016 18.8 1.6 1 23 306 329 306 329 0.97

2 9 4 2.4e+02 2.6 8.4 1 23 336 358 336 358 0.97

3 9 0.0013 0.079 13.5 3.4 2 23 390 411 390 411 0.98

4 9 0.0012 0.074 13.6 0.4 1 23 415 438 415 438 0.96

5 9 0.14 8.6 7.1 1.6 3 20 456 473 454 475 0.93

6 9 0.28 17 6.2 5.2 2 23 536 558 535 558 0.90

7 9 1.4 86 4.0 0.0 1 23 570 591 570 591 0.87

8 9 0.0012 0.069 13.7 4.5 1 23 597 619 597 619 0.98

9 9 7e-06 0.00042 20.7 1.8 1 23 625 648 625 648 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.7e-05	0.0016	18.8	1.6	1	23	306	329	306	329	0.97
2	9	4	2.4e+02	2.6	8.4	1	23	336	358	336	358	0.97
3	9	0.0013	0.079	13.5	3.4	2	23	390	411	390	411	0.98
4	9	0.0012	0.074	13.6	0.4	1	23	415	438	415	438	0.96
5	9	0.14	8.6	7.1	1.6	3	20	456	473	454	475	0.93
6	9	0.28	17	6.2	5.2	2	23	536	558	535	558	0.90
7	9	1.4	86	4.0	0.0	1	23	570	591	570	591	0.87
8	9	0.0012	0.069	13.7	4.5	1	23	597	619	597	619	0.98
9	9	7e-06	0.00042	20.7	1.8	1	23	625	648	625	648	0.97

Sequence Information

Coding Sequence: ATGTCTGAAGTGAAAGCGTGTAGAATATGCCTTCGCACGGAGGCAAAAATGTATAATTACAACCGATATCAACTGAAGTTTTATTACGAAGAAGTTATGGCTTCAAGAGTAAATGACGATGATAGGCTGCCACACTACTTCTGCTACGAATGTGCTACTATACTACACAAGTTCCACAAGTTTAAAGAGAAATGCTACACCGGACAAAAAGTACTAAAAGAGTTGTTATGGAAAGGACCTATCACCTATGAATCTATTTATAAAGTGGACCACGAAGAAGCCATGCTCACATCGCCATTAAAAATCATTAATGTCAACAAAATTGTGAAAACATACACAAGACAAGACATCAGAGAGATGATTCAAGAGAAAGCGGACAATTCCATTAATATTATAGAAATAGATAATGATTACTCCAGCGATACTTCAATGGAATTCAAAGAAGATTTAGATGGTAATGAGGATTTAGATGTCAAAGAAAATTTAGATGATAAAATACCTATAAATGAGGCCATTGAAGACAACCAACAAAGGAATATTGTTGATGGAATGATAGATATTGGCAAAGAAATGATTGAAGAAAAAAGAACAGTTAGCAAACAGAATGATAATCAAGAAAATATTGTCGTTGAAATTGATCTCAGTGAAATGATGAGTGACGAAGAAATGATAACTATTGGTAATGACATTATTGAAAGTAATGATGCACAGAAACCTAAAGCGGTGGATGTGGATAAATATGGTATTATCAATGTGAAAGGAGAAATTAATCAGAAAAGTAAAAAAACATTTTATCCTGCTTTGAAAATTCATAGTTTGGACGCTCAGAATTGGAAGACGACTGATCTAAGTGAGTCTGAAGCTTTGGTGGAGTTTAGGGCGCGCGCACAAGATAGCAAGTACATAAAGGCGGCTTACAAATGTACGGATTGTTTTAGAGGGTTCTCAAAGAAGGACATGTTAGCGAGGCATAGATTAATTAAGCATGCTGAGTCGATAGGCCCGCACGAGTGTCGGTTCTGCCGCTCACGATATAAATTGAACTGCTATCTGAAGAAGCACATGAAGGAGCACTACGTTAAATACGAATGTTTGAGATGCCATCTCGTTTGTCAGTTGCTGAGCACTGCATTGCTTCACGAAGAGTACCACAGTGGCGTGATGAGGAAGTGCGTCTACTGCAATGAGGAATTCAGACACATGTCGACGTACTACACGCACCTGCGCACGCACCGCAGCGAGCACGTGTGCACGCTGTGCGGCGCGTCCTTCGTCAGCGCGCTCGGACTCCGCCAGCATAAAAACATCAAACACATTATCGATGACATTGAGAGTCCAGACGACGACGAGGCGGTGAACACTCACTGCGAGCGGTGCGACATCCGGTTCGAGACGCGCAAGGCGTACCAAGAACACTTGTTCCACTCCGCGCTACACTTCAACGACGTGGATTCTGAGTTCAATGGTGTTATGGCGCCTAAAAAAATACTCGGGAAAAAGGAGAAAGCTGAAATAATAGGAAACCATAAAAAGACTGACGGAGATGACAAAGTGATAGTGATAGACCGGAAGAGACGAAATAGACGGAAGAAAGCAATCCCGACGACCTGCCACCAGTGCGGCGAGCACTTCGCGACGCAGGCGGCGTGCTGGCGGCACCATCTGGCGCAGCATCCGCGCACCTCCTTCTTCTCGCCCAACGACCGGTTCATCTGCGAGATCTGCGGGGCCTCGTTAGCGCCGGGCAGCGTGGCAACGCACCAGAACATCCACTCGCGCGAGCGGCTCCACACGTGCGACACGTGCGGCAAGCAGTTCCACTCCACCATCGGACTCAAGCGGCACCGCATCACGCACACTGGCGAGAAACCGTTCGCTTGTCCGCTATGCGACAAGCGGTTCACGCAGAGCAACAGCATGAAGCTGCACTACCGCACCTTCCATCTCAAGCAGCCCTACCCCAAGAGAAACCGACGCCAAAAACCCGTCCCGAAGGACACAGAGGAAGGATCTTCCAGCGATTCAGATTCAGACAGTCTGCCGGAAGCCGAGCCGAAACTACCCGAGTCCGGCCCGGGAGTCGAACCCGTACCCGACGCGATACCAGACAGAGACAATGAAGAGAGCATGCACTATTTGACACTCACTTAG
Protein Sequence: MSEVKACRICLRTEAKMYNYNRYQLKFYYEEVMASRVNDDDRLPHYFCYECATILHKFHKFKEKCYTGQKVLKELLWKGPITYESIYKVDHEEAMLTSPLKIINVNKIVKTYTRQDIREMIQEKADNSINIIEIDNDYSSDTSMEFKEDLDGNEDLDVKENLDDKIPINEAIEDNQQRNIVDGMIDIGKEMIEEKRTVSKQNDNQENIVVEIDLSEMMSDEEMITIGNDIIESNDAQKPKAVDVDKYGIINVKGEINQKSKKTFYPALKIHSLDAQNWKTTDLSESEALVEFRARAQDSKYIKAAYKCTDCFRGFSKKDMLARHRLIKHAESIGPHECRFCRSRYKLNCYLKKHMKEHYVKYECLRCHLVCQLLSTALLHEEYHSGVMRKCVYCNEEFRHMSTYYTHLRTHRSEHVCTLCGASFVSALGLRQHKNIKHIIDDIESPDDDEAVNTHCERCDIRFETRKAYQEHLFHSALHFNDVDSEFNGVMAPKKILGKKEKAEIIGNHKKTDGDDKVIVIDRKRRNRRKKAIPTTCHQCGEHFATQAACWRHHLAQHPRTSFFSPNDRFICEICGASLAPGSVATHQNIHSRERLHTCDTCGKQFHSTIGLKRHRITHTGEKPFACPLCDKRFTQSNSMKLHYRTFHLKQPYPKRNRRQKPVPKDTEEGSSSDSDSDSLPEAEPKLPESGPGVEPVPDAIPDRDNEESMHYLTLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -