Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401931.1:6442793-6444370[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.015 0.92 10.2 0.2 3 23 173 194 172 194 0.96

2 9 0.011 0.66 10.6 2.4 1 22 228 249 228 249 0.95

3 9 0.027 1.6 9.4 0.1 1 20 255 274 255 276 0.93

4 9 0.00021 0.013 16.0 0.9 2 23 295 316 294 316 0.97

5 9 0.00066 0.04 14.5 0.3 1 23 323 346 323 346 0.94

6 9 0.00014 0.0085 16.6 3.3 1 23 352 374 352 374 0.95

7 9 8.9e-05 0.0054 17.2 4.8 1 23 380 402 380 402 0.98

8 9 0.00055 0.033 14.7 3.4 1 23 408 430 408 430 0.97

9 9 1.5e-06 9.1e-05 22.8 2.0 1 23 436 459 436 459 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.015	0.92	10.2	0.2	3	23	173	194	172	194	0.96
2	9	0.011	0.66	10.6	2.4	1	22	228	249	228	249	0.95
3	9	0.027	1.6	9.4	0.1	1	20	255	274	255	276	0.93
4	9	0.00021	0.013	16.0	0.9	2	23	295	316	294	316	0.97
5	9	0.00066	0.04	14.5	0.3	1	23	323	346	323	346	0.94
6	9	0.00014	0.0085	16.6	3.3	1	23	352	374	352	374	0.95
7	9	8.9e-05	0.0054	17.2	4.8	1	23	380	402	380	402	0.98
8	9	0.00055	0.033	14.7	3.4	1	23	408	430	408	430	0.97
9	9	1.5e-06	9.1e-05	22.8	2.0	1	23	436	459	436	459	0.98

Sequence Information

Coding Sequence: ATGAATATTCCACAAACGGCTCACTGCCGCCTTTGCGCCGAACTTAAACCTCGCAATAAACTATCACACCTCGATGCAGACGAAGCAAAGTGCCGAGAAATCACCCAAAAACTAGATCGCGTTAACGCGAAGACCAATTTCAATGGGAATATATTTCCTAAAACTGTGTGTTTTGTGTGTATAGACTCTTTGGAACGCGCGTACGAGTTTGTTACAGCTGTCGAACGAGCACAAGCGGCTCTGGATGATAAAATTCTATCACAAGATGTGAAAAAAGAATGCTCTGAATCAGACTCCGATGATTTGATTGTTTATGATGTATCTGAAGTTAAATATGAAGATAATATCGAGTCTAAGATCAAGATCGAGGTTGAAGCATCCACTAACGAGCTTGTGCCGTCAAGTGATAGGTCAAAAACTTCGAGTAAAGGTAAGAAAAAGCGAAGTCTATCGTTTAGCTTAGATTCGATACCCTTAGCTCAGTTGAAACAAACGTGGAGCGAGTACAACTGGCTGTGTTCCTTCTGTGGAGTACAATTTCCTACGGTTGACGAGTTACGAGAACATTCTATGAAGTATCACAGAAGCTGCAATGCATATCGTTGTACGGATTGTAATTTTAGGAAGTTACGCTTCGACAAATTCCTTATTCACATCAAAAGGCACAAGAAACACCTGAAATTCTCATGTTACAAATGCTACAGAGTGTTTTCGACGCCCCACAAAACAAACATTCATATAAAGAAGTATAACAAAACTGAATTTGTATGTCCCGGTTGTAACACAAACTTCCTGAGTTTTGACCAATTGAGAGAACATACGGAAGTCTTCTACTATCAGATGAAAAAAGAAGATGGTATACAGATAGATAGGAATGATCTAACATGCCTGATATGTAAAAAGGAGTTTACGAAAATAGGTAGTATGAAATCACATATGTTGACGCACACTGATCGATCGAGGGACTTTGTTTGTGAAATTTGTGGAAAAGGATTCTTTAATAAGCACATTTTAGCGGACCACATCAACGGGCAGCATAGCAATGTGAGACCTCACAAATGCGAGATTTGCAAGTTGTCATTCAGAACAGTCCATCAGTTACGGAAACATGTTGGCGTCCACGACGGAGTAAAGCCATTCTCCTGTGAACAATGTGGCAAGTGTTTTCGGTTGCACAAGCAGCTCATGTCTCACCAGATCATCCACACAGACTCTTTACCACATGTGTGTACGTATTGCAACAAAGGGTTCCGGTTTAAATCGATATTAAACCAACACGTACGCCAACACACTGGGGTAAAACCGTATTCTTGTACGATATGCCAACGAGACTTCACAAACTGGCCCAATTATAACAAGCACATGAAACGCAAACACTGCATGGATATGGCCAAAAAGAAACACACTCCAGATGGTTTGTTCCCGATTGATCCGAAGACTGGGGAGGTTGTTTATCCAATGGACAAGATGGAAGAGTGGAAACGGAAGGTGCTGCAGCCGATGAGACTGGGCAGGAAGAGGGTTGCCAATGGCAGTGGATTGCCAATAGAACAGTTAAAGGAGAAAAATAATAACTGA
Protein Sequence: MNIPQTAHCRLCAELKPRNKLSHLDADEAKCREITQKLDRVNAKTNFNGNIFPKTVCFVCIDSLERAYEFVTAVERAQAALDDKILSQDVKKECSESDSDDLIVYDVSEVKYEDNIESKIKIEVEASTNELVPSSDRSKTSSKGKKKRSLSFSLDSIPLAQLKQTWSEYNWLCSFCGVQFPTVDELREHSMKYHRSCNAYRCTDCNFRKLRFDKFLIHIKRHKKHLKFSCYKCYRVFSTPHKTNIHIKKYNKTEFVCPGCNTNFLSFDQLREHTEVFYYQMKKEDGIQIDRNDLTCLICKKEFTKIGSMKSHMLTHTDRSRDFVCEICGKGFFNKHILADHINGQHSNVRPHKCEICKLSFRTVHQLRKHVGVHDGVKPFSCEQCGKCFRLHKQLMSHQIIHTDSLPHVCTYCNKGFRFKSILNQHVRQHTGVKPYSCTICQRDFTNWPNYNKHMKRKHCMDMAKKKHTPDGLFPIDPKTGEVVYPMDKMEEWKRKVLQPMRLGRKRVANGSGLPIEQLKEKNNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01073887;
90% Identity: -
80% Identity: -