Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401917.1:10050602-10059768[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.017 1 10.0 0.8 1 23 195 218 195 218 0.97

2 10 2.2e-05 0.0013 19.1 0.4 1 23 225 247 225 247 0.99

3 10 0.01 0.63 10.7 4.0 1 23 285 307 285 307 0.98

4 10 0.00086 0.051 14.1 0.3 2 23 312 334 312 334 0.94

5 10 7e-06 0.00042 20.7 0.8 1 23 341 364 341 364 0.96

6 10 0.0039 0.23 12.0 2.9 2 23 371 392 371 392 0.97

7 10 0.00012 0.0069 16.8 0.2 1 23 403 426 403 426 0.93

8 10 0.0005 0.03 14.8 0.5 1 23 432 455 432 455 0.91

9 10 6.9e-05 0.0041 17.6 0.1 3 23 466 486 465 486 0.98

10 10 0.0095 0.57 10.8 1.9 2 23 493 515 492 515 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.017	1	10.0	0.8	1	23	195	218	195	218	0.97
2	10	2.2e-05	0.0013	19.1	0.4	1	23	225	247	225	247	0.99
3	10	0.01	0.63	10.7	4.0	1	23	285	307	285	307	0.98
4	10	0.00086	0.051	14.1	0.3	2	23	312	334	312	334	0.94
5	10	7e-06	0.00042	20.7	0.8	1	23	341	364	341	364	0.96
6	10	0.0039	0.23	12.0	2.9	2	23	371	392	371	392	0.97
7	10	0.00012	0.0069	16.8	0.2	1	23	403	426	403	426	0.93
8	10	0.0005	0.03	14.8	0.5	1	23	432	455	432	455	0.91
9	10	6.9e-05	0.0041	17.6	0.1	3	23	466	486	465	486	0.98
10	10	0.0095	0.57	10.8	1.9	2	23	493	515	492	515	0.95

Sequence Information

Coding Sequence: ATGGAAGACCCGATAACCTCGTGTTTCAACAACACACCTAAAATTAATGGAATATGCATCTGCTGTTCCTCACAAAATGGATTTCTAGTGAATATTATGACATGTACCCATGCAACAATACTGGAGAACTTTACTAAATTCAAGTTAGATCCAGTTAAAATGCATATTTGCGCACATTGCCACCACATCTTGAAGAAGATAGAACAATTCAAACAACAAGTTGAAGAGAGCATTGCACTACTTACAAACCAGGGACATGTATTAAAAATAACGAAACTCCACGACCTCCAACTCGCCGGAATAGCAATAGTCGACACCACAGAACCAGAGATCTACGACATTCAAATAAAACCAGCGGAAATACAGATTATAAAAACGGAAATAAACACGGAAATTAAAATAGAAGAAGATGGTGCTTCGGACTGTGATGACGACATGCCATTGGCTGATAATAACACGGTTAGAGGGGAAACGGAAGAGGAGAGGTACAAAGGCAAGATAACTATGGTGATGTTGAGTGAGAAGGACTTGGAAGATGAAAGAGAGATGCTGAGAAACTGTGAGGGGTATTTGAAACTACCTTACAAATGTCAGAGTTGTATCATTGGATTTGACCATGAGGGGACTTTGGCGAGGCATATGCAGAGCAGGCATTATAAGAATGATAGTGGTTTTACGTGTGACATATGTGGGTCTGTGCTGGTCTCCAATAGTTCATACAAAGAGCATATGAGAAGACATTTTAGAAGACACCAATGCATGGAATGTAACAGGTGGTTCCATCACTTGCGTTCCGCGATACAGCATTACGACGACACGCACGCGCCGACCGACGCGCCAATACAATCCACTTACAAGTGCAAAGTGTGCGGGTTCGATACCAAATCCAACCGCGTGTACAGACATCATATGGACAAACACAAGAAAAGGCCGGAGTGCAAGTTGTGCGGCAACCAGTTTGTTAACGCCAACACCCTCCGAGTCCATATGTATAACATGCATAAACAGAGGGCACGCAGTTACAAATGCAACGAGTGCGACAAATCGTACAGCGCTAAGTCAGGCCTGTTCACACATAAGCGGGCCGCGCACGCGCCCGGCCCGGCAGCCTACTGCCAGCTGTGTAACACTCAGTACAAGAGCGAACAAGCGCTGAAGCATCACGTCAAAACACACTCCAGTCATATCACGGAGAGCGATAAGAAGTTCGTATGCGATGAGTGTGGTATGCGGTTCGTGCTGAAGCATTTGCTGCGGGTTCACATCGACTGGGCGCATATGAACATTGACAAATACCGTTGCGAAACCTGCTCTAAGTTATTCGCAAGTGCAGGACTGCTCAAGAAGCACGTGACGTTCGTCCACGAGAAGAAGAGGCCGCCGAGGAACAAAATCTGCGATTACTGCGGCAGAGGATTCACAAGTGCGTCGATCCTGTCCGCGCACGTGCGCACGCACACGGGCGCGCGGCCGCTGCGCTGCGCGCACTGCGCCGCCACATTCGCGCACTCCGGCGCGCTGCACACGCACGTGCGACTGTTACACGCTGCCACCAACGCGGGACCAACACACTAG
Protein Sequence: MEDPITSCFNNTPKINGICICCSSQNGFLVNIMTCTHATILENFTKFKLDPVKMHICAHCHHILKKIEQFKQQVEESIALLTNQGHVLKITKLHDLQLAGIAIVDTTEPEIYDIQIKPAEIQIIKTEINTEIKIEEDGASDCDDDMPLADNNTVRGETEEERYKGKITMVMLSEKDLEDEREMLRNCEGYLKLPYKCQSCIIGFDHEGTLARHMQSRHYKNDSGFTCDICGSVLVSNSSYKEHMRRHFRRHQCMECNRWFHHLRSAIQHYDDTHAPTDAPIQSTYKCKVCGFDTKSNRVYRHHMDKHKKRPECKLCGNQFVNANTLRVHMYNMHKQRARSYKCNECDKSYSAKSGLFTHKRAAHAPGPAAYCQLCNTQYKSEQALKHHVKTHSSHITESDKKFVCDECGMRFVLKHLLRVHIDWAHMNIDKYRCETCSKLFASAGLLKKHVTFVHEKKRPPRNKICDYCGRGFTSASILSAHVRTHTGARPLRCAHCAATFAHSGALHTHVRLLHAATNAGPTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -