Basic Information

Insect: Drymonia ruficornis
Gene Symbol: Bcl11b_1
Assembly: GCA_947859195.1
Location: OX401917.1:9995126-10003485[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.046 2.8 8.7 3.4 1 22 233 254 233 256 0.89

2 11 4.6 2.8e+02 2.4 0.0 1 23 263 286 263 286 0.90

3 11 0.29 18 6.1 5.3 2 23 291 313 290 313 0.96

4 11 0.014 0.83 10.3 3.4 1 23 317 340 317 340 0.93

5 11 6.3e-07 3.8e-05 24.0 4.2 1 23 343 365 343 366 0.96

6 11 0.00053 0.032 14.8 1.2 2 23 370 392 370 392 0.95

7 11 0.0019 0.11 13.0 0.4 3 21 408 426 407 431 0.93

8 11 8.3e-06 0.0005 20.4 0.2 2 23 440 462 439 462 0.94

9 11 0.00066 0.04 14.5 2.5 1 23 468 491 468 491 0.94

10 11 0.00019 0.012 16.1 0.4 3 23 502 522 501 522 0.98

11 11 1.2e-05 0.00069 20.0 1.1 1 23 528 551 528 551 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.046	2.8	8.7	3.4	1	22	233	254	233	256	0.89
2	11	4.6	2.8e+02	2.4	0.0	1	23	263	286	263	286	0.90
3	11	0.29	18	6.1	5.3	2	23	291	313	290	313	0.96
4	11	0.014	0.83	10.3	3.4	1	23	317	340	317	340	0.93
5	11	6.3e-07	3.8e-05	24.0	4.2	1	23	343	365	343	366	0.96
6	11	0.00053	0.032	14.8	1.2	2	23	370	392	370	392	0.95
7	11	0.0019	0.11	13.0	0.4	3	21	408	426	407	431	0.93
8	11	8.3e-06	0.0005	20.4	0.2	2	23	440	462	439	462	0.94
9	11	0.00066	0.04	14.5	2.5	1	23	468	491	468	491	0.94
10	11	0.00019	0.012	16.1	0.4	3	23	502	522	501	522	0.98
11	11	1.2e-05	0.00069	20.0	1.1	1	23	528	551	528	551	0.98

Sequence Information

Coding Sequence: ATGGATACCATAAAAACGGAGATAGATCGTAAATACACGTTGTGTCAAGGGTGTCTCAGTTCTGATCGCAAGATAACTCGCATTGCGGGCCCGTCCAGTTCTCTCTTCCTTGATCTAATTGGCGATCAAAAACATAATTTAAACAACACCAGAGACATCCTGCTATGTTGGGAATGCAGAGCACTGCTACACAAGCTACAATTATTTCAGAGACGCATCCAGAACGCACAGTATGTGCTCATTGGCTATCTACAGTCATTCGCTCAAGAGGATCCACCAAGTACATTGTCACCACTACAAACCCACAAATCAAGAGAATATGACTTCCATATAAATGACGATGAACAGAGTAATCATTTCCAATTACCATCACACGATGAGCTAAACAATGAAAATCATACTCTGAACGTTACAAAAGTAGAAATCGAAAGTATAGACAATATCAAAGAGGAAGTGCATTACATAGACAACATAGAAGTGGATTATGACACAGATTATAAATGTGACGTGAAAGCGGATAAAACATTGAAACAATTAAAGACAAAATATTCAGATATAGCAAAATATGTGAACGTACAGAAACTCCGAAGTATAGACTGTATAAATGAATATATGGAGAAGGTATTGAGTGAGAAGGAGATAGAAGACTTGATAGATAAGAGGGAGAGGAAGAAACGGGCTGTTCACGAAATGCGTCATATGTGTAAAGAGTGTGGTCTTCGATATTCGAGACGCATAGATGTATTAAGGCATaatacattccatcatactgatTCGGGTCCTCCATATGTTTGTCGGTCGTGTTCCGCTGTGCTGCAATCGGAGGCAGACCTGGTGGCCCACTGGAGCGCTGAACACACATCCATGATGCGATGCACTCTATGCACCCACATCTGCAGGTCCAATGGAGAGATTAAGAAACATTTGAACAAGTTTCACTCCAGAGTATTCATTTGTAATGTATGCAACGGGAAGTTCTGtacACTCCGCGAGTTCAAAAAGCACTACAGCTGGATGCACGGGTGGTTCACGTGCGACTACTGCGGGCGACGGTTCACGAAGAAACAGCTGCTGGAGAACCACATCAGGCGACACCACCTCCCGCCGTACTGCGGCGAGTGCAAGCGAAGCTACTCATCGTACCACACCCTGGAGAGCCACATTAGCGTGTACCACCCCCGCCTGAAGCGGCCATGCGACAACCGCAAGGAGCTGGCGTACTGCGTGGAGTGCGACAAGCAGTTCCCCAGCGTGGGCCAGTACAAGAAACACCTGAGACAGTCCGCCAAGCACACTCCCAAGACGATAATCAGGGTGCCATGTCCGGATTGTGGAAAAGTGTTCACGAGAACTAATTATATGAACAATCATTATAAATTAGTTCATATGAAAAGCACAAAATATTTCTGCGCGTCTTGCAACAAGTTCTTCGTGACGGCCTACGCGTTACGGAAGCACACACAACACGTGCATCAGAAAGTACCGCCGCCCAAAGACAAGATTTGCGACTTGTGTGGACGGGCGTTCAGCACGAACAGGATCCTAGCGAACCACAGAAGGACTCACACCGGCGAGCGGCCGTTCAGATGCAAGTACTGCCCCGCCTCGTTCGCGCAGCAGACCGCGATGAACACGCACCAAAAGACGCAGCACAGGAACACGGCGCACTCACAACTGGCTGGCTAG
Protein Sequence: MDTIKTEIDRKYTLCQGCLSSDRKITRIAGPSSSLFLDLIGDQKHNLNNTRDILLCWECRALLHKLQLFQRRIQNAQYVLIGYLQSFAQEDPPSTLSPLQTHKSREYDFHINDDEQSNHFQLPSHDELNNENHTLNVTKVEIESIDNIKEEVHYIDNIEVDYDTDYKCDVKADKTLKQLKTKYSDIAKYVNVQKLRSIDCINEYMEKVLSEKEIEDLIDKRERKKRAVHEMRHMCKECGLRYSRRIDVLRHNTFHHTDSGPPYVCRSCSAVLQSEADLVAHWSAEHTSMMRCTLCTHICRSNGEIKKHLNKFHSRVFICNVCNGKFCTLREFKKHYSWMHGWFTCDYCGRRFTKKQLLENHIRRHHLPPYCGECKRSYSSYHTLESHISVYHPRLKRPCDNRKELAYCVECDKQFPSVGQYKKHLRQSAKHTPKTIIRVPCPDCGKVFTRTNYMNNHYKLVHMKSTKYFCASCNKFFVTAYALRKHTQHVHQKVPPPKDKICDLCGRAFSTNRILANHRRTHTGERPFRCKYCPASFAQQTAMNTHQKTQHRNTAHSQLAG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -