Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401931.1:1824198-1850962[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0048 0.29 11.8 0.0 1 23 511 534 511 534 0.95

2 16 0.034 2 9.1 3.8 2 23 653 674 652 674 0.95

3 16 5.7 3.4e+02 2.1 0.3 1 23 686 710 686 710 0.84

4 16 0.00079 0.047 14.2 2.7 3 23 718 740 716 740 0.94

5 16 0.042 2.5 8.8 0.2 1 23 746 768 746 768 0.92

6 16 0.0021 0.12 12.9 3.3 1 23 774 796 774 796 0.98

7 16 0.98 59 4.5 0.1 2 20 807 825 807 827 0.90

8 16 0.0048 0.29 11.7 0.2 1 23 906 928 906 928 0.97

9 16 2 1.2e+02 3.5 7.2 1 23 935 957 935 957 0.95

10 16 0.0013 0.079 13.5 1.8 1 23 996 1019 996 1019 0.95

11 16 0.00025 0.015 15.8 0.9 1 23 1026 1049 1026 1049 0.98

12 16 0.0037 0.22 12.1 0.2 2 23 1071 1093 1070 1093 0.96

13 16 0.036 2.1 9.0 0.4 2 20 1121 1139 1120 1140 0.93

14 16 0.00059 0.035 14.6 1.3 1 23 1160 1182 1160 1182 0.96

15 16 0.00012 0.007 16.8 0.1 1 23 1188 1210 1188 1210 0.97

16 16 0.0006 0.036 14.6 0.6 3 23 1218 1239 1216 1239 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0048	0.29	11.8	0.0	1	23	511	534	511	534	0.95
2	16	0.034	2	9.1	3.8	2	23	653	674	652	674	0.95
3	16	5.7	3.4e+02	2.1	0.3	1	23	686	710	686	710	0.84
4	16	0.00079	0.047	14.2	2.7	3	23	718	740	716	740	0.94
5	16	0.042	2.5	8.8	0.2	1	23	746	768	746	768	0.92
6	16	0.0021	0.12	12.9	3.3	1	23	774	796	774	796	0.98
7	16	0.98	59	4.5	0.1	2	20	807	825	807	827	0.90
8	16	0.0048	0.29	11.7	0.2	1	23	906	928	906	928	0.97
9	16	2	1.2e+02	3.5	7.2	1	23	935	957	935	957	0.95
10	16	0.0013	0.079	13.5	1.8	1	23	996	1019	996	1019	0.95
11	16	0.00025	0.015	15.8	0.9	1	23	1026	1049	1026	1049	0.98
12	16	0.0037	0.22	12.1	0.2	2	23	1071	1093	1070	1093	0.96
13	16	0.036	2.1	9.0	0.4	2	20	1121	1139	1120	1140	0.93
14	16	0.00059	0.035	14.6	1.3	1	23	1160	1182	1160	1182	0.96
15	16	0.00012	0.007	16.8	0.1	1	23	1188	1210	1188	1210	0.97
16	16	0.0006	0.036	14.6	0.6	3	23	1218	1239	1216	1239	0.95

Sequence Information

Coding Sequence: ATGTCGGAACTGCAGCCGTTGATTCTCTGTATGGAGAATGCCTCCGGTGAGGAGGTAGCTCTGAGCATTGAGCCGGACGATGACTTCCAGACTTTCCTGGTTAAAGCGAAATGTCAACTGGGCTACGAAATAGATATCAACTCGATAACAAGAAACCAGCCCGTCTTACTCACGGACAACATATACCAATTCCTCATTAACACCGAACAGACCCTACCAGCAGATATTGGATCCAACATGGCACCAATATTGGAACCAACAATTCATCCAATGCTGGAACCAACAGACGACGCCAACGATCTAGTGTACATACTAGATGATGGTACCCAAATCAGAGCGTCCCAGATCCATTTCGACAACGAAGACCCTTTAGTCGATTTGACTGCGGAAAAAATACCGTTTATTCAGTACGTTGATGATTTCATAGATGATGACGTAGGGGTTTTCGATGGGGAGGTAAAAAAGATTAATATTACGGCTAGTCCAGTTTCACGTTGGTCTAATAATGAAAGCCCTAAATGTAGCTTCCTAAATTCCCTGCCTTTCAAGCTAGTCTGTAATAATACGTCTGGATTTGAAGCCCAGTTCACTAAATACTTAGAAGCAAACCAAAAAACATACGCGACGTTAAACACAGTGACAGCCCGCAACAAGTCCCCGAAAAGCTTAATAAAAGACAACTTCAAAAACTACGATTACCAGAGAAATGATAATTTGACTAGAGAGGATATTTTGAACATGTTCAAAGACTCGCCCATGACGTCATTGCCGTACGACCAAGGTTATACTGAAAGGAGACATGTCAGGAAGACGGACCCGTCCAGACTTGTCCATAAAAATTGGTCTAAACCTATATCCTATGTCGATATCGATGGTATGGTAATAGGCGATAGCGAGAGTCAATCGTGTTTTATTTGCGCTAAACATGTTGATAGTTCCATAGACAAGCTATATTTGTTCGATAACGAAGACCAGAGACTACACAGATGCTCTCCACAAAAGAAAATGTCGACGCAACTGAAGATTATCTGTGAGAATTGTTTGAATCAATACTTTAAACCGAGTAGAATGAAAAGCGCGAATCAGTTTCTAGGTTCTGACGAGTATTTAGTCATAAAAAATAACCAACAGTATATTTTCCAAAAGATTAAAAACTTCAGCGTGCATTTTGGTACCATAAACAAGGTAGACAAGGATGAGTTCGTGAAAGTGGAAATAGGACCGGACGGTGAGATTATTACTAAACCAATCAACGACCCGAGATCCGATGACGTCATCATAGTTAAAGATGAGGCGAAAGAGTGTAGTTCCAGCGACGTTGAGATCATAGAGCCGGAACCGGAAATAGACAATATCATAGACAATTTGGAGGATGCGGATGAGGAGGTTAAAGAGTTTTTGGGAAAGTACCAGAGTGATAGCAATGTTGATGAACTTAAATGCAGGTTCTGTGAGCGTATATTCGCGGCTGTACCCGAATTGATGGAACACTGTGAAACGCATAAGCACGATTTGGACGACGGCGAAGTGTATCCTTGCCCGCTCTGTAATTATGGCTACGCTAATCTGAAATGGCTGAAAGGTCATTTGAAAGCTGCCCATGAAAAAACAAAATCAAATGATGTGAAAGAATCTAATACGAATATAGAAGAGCAAAAGCCAGAAGAGTCTTCACCAATCGCTGGCCGTACTAGAAGCTCTAATAAGAAGAGTGAAAACGAAAAAGAAACAGAAAATAAATCGGAAGAGAACAAACTAGAATCGAATAATGAACCGGCCGGGCCTCTCATGAAGACGGAGGTAAAGCAAGAATGTGTGGACACCAGTGAAGATGAGATTTGGATAGTTCACACAGCCGATGCAGAAGCACCGCAGGACCTCCAGAAACTACTGGACGCAGCTAAGCGTCCCCGCAAGAAGCGCGCCAAGGGCCCGACGTCAGACCCCCACATCGTGACCTGCCACAATTGTAACGAATCCTTCACCTCTAAAGTGAGGCTTAAGTTTCACATGCAGTTCCACGAGTCCCCGAATCCCTTGACGGAAGGGGGGCAGTACAGCTGCCCGCAATGCGCCGGCGCGAGCTTCGCGACGGAGACCGCGCTGTTCGATCACGTGCACTTCCAGCACGATAAACACCGTCGATGGCATTGCCCCGTACACGGATGCGGGAAGACATTCTACCTCAGGGCGACGCTGACCAAGCACAGTCGCACGCACACGGACACGCGCCGCTACGCGTGCGACACGTGCGGCAAGCGCTTCCTCGACAAACAGACGCTGGACGAGCACGGAGTCACGCATCTGCAGATCAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGGCGCTCGCGCCTGCGCATGCACCTGCGCGCGCACGAGGAGGAGCTGGCGCCCGCGCTGGTCGCAGTGTGCGCCGTCTGCGCGCGCGCGTTCCGCGACCACAGCGACGCGCAGgaacacgcgcTCAAGTCATCGGAATGTATAGAAGTGTTCGCCAGTGAGCTGAAGGAAGAAACCGAAGAGGTGATGGTCCAGTTATCGCCCACCAGTGGGCTTGTCAGGCATACAGTGCAGATTGTCGAGTCGCCCAAATTGTCAAAGCCGGTTGTACGTCAAGTGGCGAGTCCTAGAGGTGAACCATTGTTGTCGACTCTGTGCGACGAAGCGCGCGCGCTCATACGAGTTGTCGAAATCGAGAAAGCATTCCGATGCGAGTATTGTGAAGAGGTGTTCTACTTAGAGAACGGTTTGAACACGCATCGTGCTATACATAAGAACGTCAAGAACCCATTCACATGCCACATATGTAAAGTCAGCTTCGCTACTTACTCCCGTTGTACAACCCACAAGACGACGCATGGGTTCTACAAGCGGTCCCTAGCGGAGGCTAAGAAACAACCCTCCACGGAGACGTCGCAAGGGCCCTCCGCCACCGGCATCCTGGGCTACGGGGACTTCCCCGTCGTCAAGCACTTCCTCTGCGAGGACTGCGGCCGTTCGTACCTGCACTGGACGTACCTACAAGTACATAGACGCATGAAACACGCCAACGAGAACTTCCTGTACAAATGTAACCAGTGCGAGCTGACCTTTCCTAACAGTTGGAGCTTGGCATACCATCGCAAGAAACTGCACGGTAAGAGTGGCGCGGACGAACCGGGCGCCACCTCCAAGATACCCATCGAAGACTACAGGATTCCATGTCGTGACTGTGATGAGGTGTTGCCAAACAAAACTGCACTCTATAAGCATAGGAAGAAGGAGCACAGTGACATGTCTTTGTGTATGAATATTCAGAAAAAAAAATCACCGGTCAGTTTATTCCATCCAACCAGCGAATCGGAAGTGTCGTGCGCGTCTTGCAACAAGCGCTTCTCGGACCGATGCGCGCTTGCAGCGCACACGGGGGGCGGGGGGGTGAGGGGCGCTAGTTGTACGGGAGGGGCGGCGGGAGGGGCGCGGCCGCACGCGTGTCCCGTGTGCGGGCACGGGTTCCGTACGCTGTCCATGCGTAATGAGCATCTGCGCGTGCACACTGGCGAGCGGCCCTTTCCATGTGACGTGTGCGGAGTTGCATTTCGACGATCGACGGCGATGCGCAACCACCGTCTGATCCACACGGGCGTGCGCGCGTGGGCGTGCGCGCGCTGCCCCAAGCGCTTCCGCATCCGCTCGGAGCTGCGCACGCACCTGCGGCTCAAGCACCCCGCCACGCTCGCCGTCATACAGATGCGCGGGCTAGACCCGTCGCCCGAGGAGGTGATGGCGCAGCTCGCGGCCCACAACATACCGCACGACAAGGTCATCGAGATCACCAAGATATCCTTCCCCAAGGGCAGCCGCAGCGTGGTGCCGGACTGCGCGCGCGCACTGTCTGCGCTGAGCGGCGTGCCGCGCGCGCACGTCGCCGTCGCGGCACAGCCCGCGCCGCGCGCACTGGACGAGTTCGTCCCCGCCCGTCGTGGGAGAGGCATCGCCAAGAACCCGCGGCGGCCGAAGATACTGCAGCGGGCGGACATACACCAGGAGTTGTCCGACCTGAACGTGCAGCTGTTGCTCCGTGAGGGGGTGATGGTAGCTAACCAGATGGTGCAATTGCAGCTGGATGACCCTATGCTGTTACAATAA
Protein Sequence: MSELQPLILCMENASGEEVALSIEPDDDFQTFLVKAKCQLGYEIDINSITRNQPVLLTDNIYQFLINTEQTLPADIGSNMAPILEPTIHPMLEPTDDANDLVYILDDGTQIRASQIHFDNEDPLVDLTAEKIPFIQYVDDFIDDDVGVFDGEVKKINITASPVSRWSNNESPKCSFLNSLPFKLVCNNTSGFEAQFTKYLEANQKTYATLNTVTARNKSPKSLIKDNFKNYDYQRNDNLTREDILNMFKDSPMTSLPYDQGYTERRHVRKTDPSRLVHKNWSKPISYVDIDGMVIGDSESQSCFICAKHVDSSIDKLYLFDNEDQRLHRCSPQKKMSTQLKIICENCLNQYFKPSRMKSANQFLGSDEYLVIKNNQQYIFQKIKNFSVHFGTINKVDKDEFVKVEIGPDGEIITKPINDPRSDDVIIVKDEAKECSSSDVEIIEPEPEIDNIIDNLEDADEEVKEFLGKYQSDSNVDELKCRFCERIFAAVPELMEHCETHKHDLDDGEVYPCPLCNYGYANLKWLKGHLKAAHEKTKSNDVKESNTNIEEQKPEESSPIAGRTRSSNKKSENEKETENKSEENKLESNNEPAGPLMKTEVKQECVDTSEDEIWIVHTADAEAPQDLQKLLDAAKRPRKKRAKGPTSDPHIVTCHNCNESFTSKVRLKFHMQFHESPNPLTEGGQYSCPQCAGASFATETALFDHVHFQHDKHRRWHCPVHGCGKTFYLRATLTKHSRTHTDTRRYACDTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELAPALVAVCAVCARAFRDHSDAQEHALKSSECIEVFASELKEETEEVMVQLSPTSGLVRHTVQIVESPKLSKPVVRQVASPRGEPLLSTLCDEARALIRVVEIEKAFRCEYCEEVFYLENGLNTHRAIHKNVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLAEAKKQPSTETSQGPSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKLHGKSGADEPGATSKIPIEDYRIPCRDCDEVLPNKTALYKHRKKEHSDMSLCMNIQKKKSPVSLFHPTSESEVSCASCNKRFSDRCALAAHTGGGGVRGASCTGGAAGGARPHACPVCGHGFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACARCPKRFRIRSELRTHLRLKHPATLAVIQMRGLDPSPEEVMAQLAAHNIPHDKVIEITKISFPKGSRSVVPDCARALSALSGVPRAHVAVAAQPAPRALDEFVPARRGRGIAKNPRRPKILQRADIHQELSDLNVQLLLREGVMVANQMVQLQLDDPMLLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -