Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401909.1:7497885-7503365[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.9e-06 0.00036 20.9 2.9 1 23 484 506 484 506 0.99

2 8 5.3e-07 3.2e-05 24.2 1.5 1 23 512 534 512 534 0.98

3 8 7e-06 0.00042 20.7 0.6 2 23 543 564 543 564 0.98

4 8 7.7e-06 0.00046 20.5 0.7 1 23 570 592 570 592 0.99

5 8 8.2e-08 4.9e-06 26.8 2.1 1 23 598 620 598 620 0.98

6 8 1.9e-06 0.00012 22.4 2.2 1 23 626 648 626 648 0.97

7 8 8.2e-05 0.0049 17.3 7.3 1 23 654 676 654 676 0.97

8 8 6e-05 0.0036 17.7 0.9 1 22 682 703 682 703 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.9e-06	0.00036	20.9	2.9	1	23	484	506	484	506	0.99
2	8	5.3e-07	3.2e-05	24.2	1.5	1	23	512	534	512	534	0.98
3	8	7e-06	0.00042	20.7	0.6	2	23	543	564	543	564	0.98
4	8	7.7e-06	0.00046	20.5	0.7	1	23	570	592	570	592	0.99
5	8	8.2e-08	4.9e-06	26.8	2.1	1	23	598	620	598	620	0.98
6	8	1.9e-06	0.00012	22.4	2.2	1	23	626	648	626	648	0.97
7	8	8.2e-05	0.0049	17.3	7.3	1	23	654	676	654	676	0.97
8	8	6e-05	0.0036	17.7	0.9	1	22	682	703	682	703	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTGTCGCACGGGGAGTGGTGCGATGTGAAGCTTATGTGCGGTGGTCGCGCTTTCAGCGCGCACCGCGCTGTACTTGCCAGTGTCAGCACTTTTCTTAGACGTATACTGCTTTCGTGCCCCGTAGATGAAACGCCGACATTTATCGTCTTGCCTGACTTTGACTTCGATGCTATGTCATCGGTCCTTTATTATATTTACAATGGAGAAGTTGTCGTTCAAAAAGAAAAATTAGAAACGTTTTTGGACATTATAAATGCAATGCAAATATTCATTGATAGCCAATACTTACCAAAGAAGCATGATGCAGGAGATTATATAAATCCTAATTCTGGTGCTGGATACGAAAATAACTTTTTAAAAAGGAATATTTTTACATTAGGATATCCAGATTTAAAAGATCAGCGCTTCATCAATTTAAAGAAGGGCAAGGAAATCCAGGATGTTCTTTTACAATATTCTGTCGGCAGCTCGGATTGCAGCGATAAGCTGCTACGTTGTCAGAATCCAAGTGGAGAGCGCAAGTCTCCTTTAGGAAATCTGAAATCGCCGTTTGGAGACCGACAAAGGAACTCTTTTCTACGTGATTTATATATCGAGACATATCCTCGAAACGGTAATGTTAACGGTCTGCCGGCAGGCGTGCTAGCAATATCAAATGAATGCTATCGTGCTCCCGCATCTGTTCTCTTGACGAATGCAAATGCTAAGCATCTCGGCGCCGACGACACACTCTTAGAACCATATAAAAACACGAGCGAACACATCAGTCATTCATCTACCGTATTTCACCCCCGTAAACAGCGATGCCCACGAGATCAAGATTACGGTGAAACTTCTAAAGGTTTACATCCTTCATATTTTAATGTTTGTCCAGCAGAATTGCAAAATAATAACAGACAACGTTATGTGAACGATCAAATCAGAACTCGATCTAAAAATGTATTGTTGAATCATAATCCAGAGAAGCCTAAACAATTACATCAGCTGAAGTTACAGGAGCATATTTTGTCTGGTTTCTACGTACCATCTATAGATCTAAGTGTTGCTCCACCGATTTTAGGAGCTATGAAAGCGTTACAGACGAATACCGAAATTAAATATACTTCTCAATTTCTAGTCAATAGTAGTAATGTAGAAAATAATAGAGAATTCGTATTGAGCGGAGCATCAAGGCCAGCGATTTTAAATCAGGTTTTAGAGAGCCCCTGGAGTCCAAGGATACCTGTAAATTACAAACCATTTCGTAGAAAATCGGAAAATCTTGCAAAACCTCAATTGCTGCAAATAACCGTATCAAAAGGTAGCTCCGATAGCAGTCTCAATGATAGTAATAACAATGTGTCGAAGAATCCGGACGAAGCGGCGGAAACAGTCGAGATAAATGAAGTCAACGAGCCTGCGATAGCTTCGCAGGAGGAGACCGCTCAAAGAGACGACTTCAAATGCAGTATTTGTAACCAGGTGTTCACAAACAGCGAGTGTTTATCAGGGCACATGCGGAGGCACAACTCTATCGCTCGTTACACAtgcggggaatgcggcaagacattctcgcagttgaggaacttcaagtaccacatgtccatccacagaggcaccagggagttcgcagccacctgcaccgtgtgcggcaagtacttcAATGATAGGGGCTACTTGAGTAGCCATATGAAAATTCACAGAAATCGTAAAGAATATAAGTGCACCCTATGCCCCAAGTCTTTTAATCAACGCGTCGCCTACAACATGCATGTTCGAATTCATACAGGTGTaaaaccgcacgtttgcgaggagtgtgggaaggcgttctcccgcaagatgctgctgaagcagcaccagcgcacgcactcgggcgagcggccctacgcctgcacgcactgcgacaagcgattcgctgaccgatccaacatgactctacatctgcgattgcacacaggcgtcaagccgttctcatgcacgctgtgcccgaagtcgttcaccaagaagcaccatctcaagtcgcacctgaacttccacaccggctcgaagccctactcctgcccTCGATGCAAGCTGGCCTTCACCCAGTCCTCCAATATGAGGACACATCTAAAAAAATGTAGCGCACCAAAACCGAACTCTGAGGGTGAAACGTAG
Protein Sequence: MCEWLSHGEWCDVKLMCGGRAFSAHRAVLASVSTFLRRILLSCPVDETPTFIVLPDFDFDAMSSVLYYIYNGEVVVQKEKLETFLDIINAMQIFIDSQYLPKKHDAGDYINPNSGAGYENNFLKRNIFTLGYPDLKDQRFINLKKGKEIQDVLLQYSVGSSDCSDKLLRCQNPSGERKSPLGNLKSPFGDRQRNSFLRDLYIETYPRNGNVNGLPAGVLAISNECYRAPASVLLTNANAKHLGADDTLLEPYKNTSEHISHSSTVFHPRKQRCPRDQDYGETSKGLHPSYFNVCPAELQNNNRQRYVNDQIRTRSKNVLLNHNPEKPKQLHQLKLQEHILSGFYVPSIDLSVAPPILGAMKALQTNTEIKYTSQFLVNSSNVENNREFVLSGASRPAILNQVLESPWSPRIPVNYKPFRRKSENLAKPQLLQITVSKGSSDSSLNDSNNNVSKNPDEAAETVEINEVNEPAIASQEETAQRDDFKCSICNQVFTNSECLSGHMRRHNSIARYTCGECGKTFSQLRNFKYHMSIHRGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCTLCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACTHCDKRFADRSNMTLHLRLHTGVKPFSCTLCPKSFTKKHHLKSHLNFHTGSKPYSCPRCKLAFTQSSNMRTHLKKCSAPKPNSEGET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00622142;
90% Identity: iTF_00622142;
80% Identity: iTF_00622142;