Basic Information

Insect: Drymonia ruficornis
Gene Symbol: Zfa_1
Assembly: GCA_947859195.1
Location: OX401908.1:4829089-4837774[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0067 0.4 11.3 1.5 3 23 651 672 650 672 0.96

2 23 0.33 20 6.0 0.3 1 22 1059 1080 1059 1080 0.95

3 23 6.5 3.9e+02 1.9 0.3 1 22 1122 1143 1122 1145 0.82

4 23 0.0021 0.12 12.9 1.7 2 22 1156 1176 1155 1176 0.94

5 23 2.6 1.6e+02 3.1 0.0 2 23 1184 1206 1183 1206 0.89

6 23 0.0058 0.35 11.5 0.1 3 23 1226 1247 1224 1247 0.96

7 23 0.0036 0.21 12.2 3.5 1 23 1253 1276 1253 1276 0.95

8 23 0.12 7.2 7.3 0.0 1 23 1301 1324 1301 1324 0.90

9 23 0.0053 0.32 11.6 3.5 1 23 1329 1351 1329 1351 0.97

10 23 0.0083 0.5 11.0 0.2 1 23 1357 1380 1357 1380 0.95

11 23 0.0022 0.13 12.8 1.3 1 23 1394 1416 1394 1416 0.97

12 23 0.00017 0.01 16.3 1.8 1 23 1465 1488 1465 1488 0.97

13 23 0.044 2.7 8.7 1.7 1 23 1547 1570 1547 1570 0.96

14 23 0.0011 0.064 13.8 2.1 2 23 1595 1617 1594 1617 0.95

15 23 0.084 5 7.8 0.1 2 23 1623 1645 1622 1645 0.93

16 23 0.39 24 5.7 0.4 1 21 1690 1710 1690 1711 0.87

17 23 0.0004 0.024 15.1 1.0 1 23 1721 1743 1721 1743 0.93

18 23 0.00011 0.0065 16.9 0.3 2 23 1831 1853 1831 1853 0.93

19 23 3.8e-07 2.3e-05 24.7 1.4 3 23 1860 1880 1859 1880 0.98

20 23 0.0067 0.4 11.3 0.1 2 23 1907 1928 1906 1929 0.94

21 23 0.12 7.2 7.4 0.0 1 23 1954 1976 1954 1976 0.97

22 23 0.012 0.71 10.5 0.9 1 23 1982 2005 1982 2005 0.95

23 23 0.00024 0.015 15.8 0.4 1 23 2013 2036 2013 2036 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0067	0.4	11.3	1.5	3	23	651	672	650	672	0.96
2	23	0.33	20	6.0	0.3	1	22	1059	1080	1059	1080	0.95
3	23	6.5	3.9e+02	1.9	0.3	1	22	1122	1143	1122	1145	0.82
4	23	0.0021	0.12	12.9	1.7	2	22	1156	1176	1155	1176	0.94
5	23	2.6	1.6e+02	3.1	0.0	2	23	1184	1206	1183	1206	0.89
6	23	0.0058	0.35	11.5	0.1	3	23	1226	1247	1224	1247	0.96
7	23	0.0036	0.21	12.2	3.5	1	23	1253	1276	1253	1276	0.95
8	23	0.12	7.2	7.3	0.0	1	23	1301	1324	1301	1324	0.90
9	23	0.0053	0.32	11.6	3.5	1	23	1329	1351	1329	1351	0.97
10	23	0.0083	0.5	11.0	0.2	1	23	1357	1380	1357	1380	0.95
11	23	0.0022	0.13	12.8	1.3	1	23	1394	1416	1394	1416	0.97
12	23	0.00017	0.01	16.3	1.8	1	23	1465	1488	1465	1488	0.97
13	23	0.044	2.7	8.7	1.7	1	23	1547	1570	1547	1570	0.96
14	23	0.0011	0.064	13.8	2.1	2	23	1595	1617	1594	1617	0.95
15	23	0.084	5	7.8	0.1	2	23	1623	1645	1622	1645	0.93
16	23	0.39	24	5.7	0.4	1	21	1690	1710	1690	1711	0.87
17	23	0.0004	0.024	15.1	1.0	1	23	1721	1743	1721	1743	0.93
18	23	0.00011	0.0065	16.9	0.3	2	23	1831	1853	1831	1853	0.93
19	23	3.8e-07	2.3e-05	24.7	1.4	3	23	1860	1880	1859	1880	0.98
20	23	0.0067	0.4	11.3	0.1	2	23	1907	1928	1906	1929	0.94
21	23	0.12	7.2	7.4	0.0	1	23	1954	1976	1954	1976	0.97
22	23	0.012	0.71	10.5	0.9	1	23	1982	2005	1982	2005	0.95
23	23	0.00024	0.015	15.8	0.4	1	23	2013	2036	2013	2036	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGTGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAACCTCACGTCCTCGCTTCGAAAATCAAGGACTGTGTGTCTGTGCAGATAAACGAGAATGACGACCTGCCAACGAATCTCTGCAGGAAGTGTATGAACAATGTCAATAACTGGCATGTATTTAAAAATGTGTGTGAAAGGACACAAAACAAACTACAGTCTCTGATTCATAAAGATGGCAGCCAACTAGAAGGGGTGAAAATTAAAAGTGAACCGTTGTCTGATGAGGCATATGACGATGGAGTGGTCATTGATGGATCATACCCTGGTGTGGAGAATGCCACCATGTCAGGGAAAGTCCAACCTGAAGGTCCCCCAATCTTGGCATCACTGGGGCTCACACCAAAGAGTGATAAGAGTGTCGATCCTCGAATGGATTGGCATCGGGTTCATGCCATATTGGACATGGTTCGAGACGATGAGGTGATTGATTCACTACAATCCAACGAGGAGTGTGATGTGTTACAACACTCTGATCACGACTCTGAAACAGAAACCGAACTGATGCCAGATCTAGACGATGCCTTCTGTGATTGCAAAACTGGTTACATATGCAAAGACAAACAAGTAATGTCTAAGGATCCGAAGCAGTCTTTGTCTGTCAATAATATTAAAATAAAAGAAGCAGCAAATATGAGGAAACGTAAAGTAGGTTCTAGGAAGCATTGTCCTAGACCTAAAAATGCATGGCAGTTGCTGTTCACTGACGACCTTTTAGAACTGATTGTTGCTTCCACTAATGAGAGAATAAGCGGTGGGAATGGATTTTCCTCGTCGACTTCTGTTAACGAAATTAAAACTCTTATCGGCATACTATACCTGCACGGCATCATGCGGCCGACGCATCAGAAATGCGATGACCTTTGGAACAGTGAATGCGGAATGCCTTGCGTTAGAAATGCCATGAAGTACGAAAGGTTCAAATGCCTCCTGCGAAACTTGAGTTTCGACAAACGGGACGACGACAGCATTATACAGTTCGATATAATGAAACGTATGCGTAAAGTATTCGAAATCTTCGCCATGAATTGCAGAACAGCTCGCGACATCGAGAATATTGCGGTTATTGATGAGATCATTGTGCCAGTTTACGGGCCTTGTCCGTTTCGATACGATATTGATAAGAAACCGCTGAAACGGGGCATAAAAATGGTATTGCTCGTCGATTCGTCAACTTTCTACGTGAGCAATTTAGACGTTATTACCGACCCTTACTTCGGTGCTGCAGATATCGTGAAAAAGTTGGTCCAACATTTAGCGGCAACAGGCAGAACCATCGTCATGGACAGTTGGTTCACATCATTAAAATTGATGGAGATTCTCAGAAACGAGTATCAGTTGTATACAATCGCAGCTTTGAATCCCACTAGCGACTTGATTCCGCCGTTGTTTTTATCACAGTACAGAAAACGTCGAACGTTCACCACTGGATTTATTGATCACCAAGTTTCGCTCACGTCTTATGTGAATTCGGAGTCGAAATCTATAAACGTTTTGACAAATGAGCCCAGGTTTTATAAAAAGGGACATGTTAGCCAAACTACAGCAGTGTCCGTCTATAAGAAGAATCAATCCGCAGTTGAAGTCGTTGATGTTCTTATGCACTATTACACTACTATGCAACATACAAATGATTGGACCTTATCATTATTCTTTACATTGTTAAACATTGCCTCGGTCAACGCTCAGGGAATGGAGAGTGAGAAGGAGGAGGAAGAAGACGAAGAAGAGGTGAATGACGCCACTCATGCCTTCCCGAAAGTCCCCAATATGCCTGAAGTGTCTATAACGGTGATGCGGCCCTCCGGTGAGACGCTCCACGCGCGGCAAGGCATCCACCAGCTCGCGTCGAAGGACTGCCTCGTCTGCGGCCGCTCCTACAGATACTCGCACAACGCCCGCCGACACGAACTCACCTCGCACAGCTTCGACAGGTACACGAACAAGATAACAAACAAGAAGTCACTCACTCATATGCAACCTAAACTTAGGCCGAACCCGTTCAATCCGAAGGCCCGTATGATGCCGAACCCCATCAGTCGTAAAATGCAATTTATGTCAAAGAATATTCCGACTAAGATCATACCCATGAACAAAGTTATAACTCCACAAAGACCCATTCCAATCAAAACGGCCAAATCACAGCCGAATAGTTTACCTTACCCCCTTCGTATCAAAGCACTTAAAGACTTGCAAATAAAGAAGAAAGAACCGCAGATATTAAAGACGCTGCTGACTTCTAAGCCAGAAGTGTTAGTTTCTGAACCGGAGATAATAAATTCTGGTCCCGAGAGCCCCGAGACCTTGATATCTGAACCGGAAATTGCTTCTTTCCAAGTCGAAGCTATTCTCTCAGAGCCCGATGCTTACGATCAACAACAGGGTGACGAGGAGGCCGACGGTGATTCGCACAACAATCAAAGTCAGAACTATGACACCGCCGACCTGGATTCTGAAAATGAGATCGAGATCGCTCGTCAGCGAGCTAACGACGCTGAAGGTGAAGACCAAATGGACGAAGATGATAACGCCGAACATGACCAAGAAAATAATATAGAAGGCGCTCAAAGTGATAATGAAAAAGACGGTGACCACAATGAAGACACGGCTGAGAGCCGAGATAATATGGAAGTGGACGACGGCGTCGATATCAAAGCTGCAAGTGAAGCTAAAGACAAAGAGGGTTACGCTGAGGGAGAATATGAAAATGACAATGAGATGAATCACGACGATCATGATGAAGATGAAGATGATGATGATCTCCCCATGTCCTTGGCCCCTGTCGTCGAAATAAATGAGGTCACGCAGGGTAATAACTCTTACAACAGTGAGATGAACGAAGAAGAGGAGGAATTGGACGAGACCGGCGACCCTAACGAGACTATCGAAGGTGAAGGCCAAGTCAAAGTGCTCGATCCGGAAAAGACATATGTCACTAAAGCTCAAAGAGATTTCATATTGAAATACCGCGACATAATCCAGCAGATCAATACCAAACGGTGTCTGTGTTGCGACAGAGAACATCCTCGGAGGAAAGCGGTCATACAACATTTGCAGAAAAACGGACACAAGGTCCCGAAACACACGTGCTATAATTGCGTGGTCACGTTCGGACACATCGGCGCCTTGCTGAGCCACATGAGGTCCAACTCCTGCACGAATCTTTGGAAAATTATTTATGACGAAAACGGTATAACGGACGATTTGATCCTTGAAGACGAGCCCAAAGATAATAAAGTTCAATATAAAGACATCTTCAACGCTAGATCGTACGCGTGCAAACTATGTCCTGCGAAATTCCAGCTGAAACAGTTTATAATGAAACACGTTTTGGACGTGCATGAGGACGGACAGTCCGGAGTGGGAGCGCTAGTTTGTGTACATTGCCGCTCCAGATTCAAGGATAGGAGTTTACTGAAAAAACACATTCGTAAAGGCGACTGCACAGTTTATATTTCTTGTGATTTATGTGCGGAGAAGTTTATCAATATGCAAGACTTTAACGATCACGCTCTAGCTATCCACGCGGGCAGTTTCGACCAGGATAATATGAATAAATGTGTCGACGGCCGTCCGACGGACTGTCCTATATGCGGCAAGAAAAACAGTAGCTACCCGAATTTGGTGAAACACTTGAAGATAATACACAGTGAGGAGAAACCGCATTACTGCCAACATTGCGACTCTAAATTCGAACAAGCTACTGATCTGAACAAACACATTTACATGGAACATTCCGACAGAACTTTAGGGATGCAGCCTGAGCCCGACATGTCGATAGTGAAAGAAGAGGCGGAGGAGTACCACTACTCATGCACAGAATGCAACGCAATATTCGAAACTGTCGATGCATGGACAGATCACCAGGTCGCCGAACACAATCAGGTGGCCCATCATTGCGACCAATGCGATAAGAAATTCTTGCGACCATCGGAGCTCGCGGAGCATAAGAACACCCATTTGCGAGTTAAATTCTACCCATGCAGTGTGTGCCCTAACTCATACAGCACTCCGCAGAAACTGTCGGAACATGTTCAGCAGTCCCACGCCGGAGTAGGTGCCGGCGCCGTCGCCGCGGACACTGAATTTTTCTGTGACATTTGCATCAGATCATTCAAGAGCCGTCAAGCGTACTCCAATCACATGCGTATACACGCAAAGGTACCCACTACGAATAGGAAACCGGGAGACCCCAAGGCGTTCTCACCGCAGATCATTGGAAAGCCGATCAAACAGTTCACAATGGTCCAACCTAGTTTCGTCTCGTTCAAACCGAGTTGCAACGTTCCTAACGCTCCTTACTCGTGCGACATCTGTGGCAAGGGTTTCATGCATAAGAAAAATATATGGAAACACAAGAAAGTGTTGCACGCTGACTTGTTGAATGACAGAAACGATAGTGAAGAAAATACGATGCAAGCGTCCACAGAGGAAGAGGAGTTTAATCCTGAAGAGAATGGTGCCGTGTTGTCCACGCCGCAGTTTAACAGTTTCAACTTTACAAATTTCCCGAACAATATCCAACAACCGCCCCAAGAGATGATGTTCTCATGCGAGTTGTGCATGAAACGATTCCCACTCAAAACAAGTTTGATGAAACACAAACGCGCCAAGCACGGCATCGTCTCTAACGCCGGCAACAGCACCGAGACACAGCCACACACGACCTCGAGTGAGACCAGTAGATCGAGCTGCACTATCTGCAAAATAACATTCTCGGATAAGAAATCTTACTATCGCCACAGGAAGAATGTACACAAGTCCACGATTCAAATGTGCAAAATTTGTGGGAAGCCTCTCAACTCTACATTAGAGTTGTATGAACATTTGAAAGCTGCTCATGCGAGGGAATTATTGGGCTACAATGCTAATCAAGGATCAAGTAAAAGTCAGCCGGAAGTGTCACAGGACATCGAAGCCGACATGGAAAATGAGCAAGAGTCGGTCGACCCGAGTGTCGATTACCAGGCGCGATACCCGTGTGACACGTGCGGTAAGCAATTCCTCGGATTGCTCTCATTACAGAACCATCAGTGCATTAACCAAATCCCGGCACAACCGCAAACTTTCGATTGTGAAATTTGCCACAAGAGCTACACGTCCATCTCCGCGTTGAAGAGTCATCGAGGTTGGCACTTGCGATCGCCGGACGGAAAGGCGGCCGCCAACAATTCCGGCCTATGGATGCCGCAGCATAAAGTCACGAGCAAGATCAGCAAACACGAAGTGATCGATGCGGCCCAGGTTGCGAAGGTTCAACACGTGCCGCCGCCCGTCGCCACGGTCGCGAAGAGGAGACTGCCACCCGAAGTCGAGGTGACCGTCGTCAATCCCAACAAGAAGCTGCGCTCCGACGACTCCGAACTGGAACAGAGCTCCGGCGCGCTCGAGGACAGGTACTGCACCATCTGCGACAAGGAGTTCACCAAGCGCGCCGCCTACCAACGCCACATGGACGAAGTCCACCAGCCGAACTCGGTGTTCTGTCCCGTGTGCGACAAAAGCTTCACACGGAAATCTACCTTACTAATCCACATGAAGAAGCACTACGAGAGCGGCGAGAGTAGTTCGGCGGCGGGTCAGGCGGAGGCGGAGGCGGACGAGGAGACGGAGGAGGTGGGGGTGTCGTGCGAGGTGTGCGGCGCGGCGTGCGCGGACGCGGCGGCGCTGCGCGCGCACCGCGCCCGCCACCACGCGGAGGAGTCGGGCTCGGAGTCGGAGTCGGACGGGGAGGCCAGCTCGGCGGGCGCGGCGCCGCCCGGCGAGTTCACGTGCGGCCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTCATCGCGCACCGCGCCATGCACGCCGCGCCCACTAAATTCTTCTGCAACATTTGCAAGGTGTACTTCTCGCGCGCGCTCGACCTGTCCTCGCACACGCGGGCGAGGCACGCCGACAACGAGAAGGTGTTCTTCCCCTGTGCCATGTGCGATAGGTTCTACATGAACAAGAAGAGCTTACAGCGGCACATCGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDTEPHVLASKIKDCVSVQINENDDLPTNLCRKCMNNVNNWHVFKNVCERTQNKLQSLIHKDGSQLEGVKIKSEPLSDEAYDDGVVIDGSYPGVENATMSGKVQPEGPPILASLGLTPKSDKSVDPRMDWHRVHAILDMVRDDEVIDSLQSNEECDVLQHSDHDSETETELMPDLDDAFCDCKTGYICKDKQVMSKDPKQSLSVNNIKIKEAANMRKRKVGSRKHCPRPKNAWQLLFTDDLLELIVASTNERISGGNGFSSSTSVNEIKTLIGILYLHGIMRPTHQKCDDLWNSECGMPCVRNAMKYERFKCLLRNLSFDKRDDDSIIQFDIMKRMRKVFEIFAMNCRTARDIENIAVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMVLLVDSSTFYVSNLDVITDPYFGAADIVKKLVQHLAATGRTIVMDSWFTSLKLMEILRNEYQLYTIAALNPTSDLIPPLFLSQYRKRRTFTTGFIDHQVSLTSYVNSESKSINVLTNEPRFYKKGHVSQTTAVSVYKKNQSAVEVVDVLMHYYTTMQHTNDWTLSLFFTLLNIASVNAQGMESEKEEEEDEEEVNDATHAFPKVPNMPEVSITVMRPSGETLHARQGIHQLASKDCLVCGRSYRYSHNARRHELTSHSFDRYTNKITNKKSLTHMQPKLRPNPFNPKARMMPNPISRKMQFMSKNIPTKIIPMNKVITPQRPIPIKTAKSQPNSLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDAYDQQQGDEEADGDSHNNQSQNYDTADLDSENEIEIARQRANDAEGEDQMDEDDNAEHDQENNIEGAQSDNEKDGDHNEDTAESRDNMEVDDGVDIKAASEAKDKEGYAEGEYENDNEMNHDDHDEDEDDDDLPMSLAPVVEINEVTQGNNSYNSEMNEEEEELDETGDPNETIEGEGQVKVLDPEKTYVTKAQRDFILKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNSCTNLWKIIYDENGITDDLILEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSGVGALVCVHCRSRFKDRSLLKKHIRKGDCTVYISCDLCAEKFINMQDFNDHALAIHAGSFDQDNMNKCVDGRPTDCPICGKKNSSYPNLVKHLKIIHSEEKPHYCQHCDSKFEQATDLNKHIYMEHSDRTLGMQPEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQSHAGVGAGAVAADTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKAFSPQIIGKPIKQFTMVQPSFVSFKPSCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEEEFNPEENGAVLSTPQFNSFNFTNFPNNIQQPPQEMMFSCELCMKRFPLKTSLMKHKRAKHGIVSNAGNSTETQPHTTSSETSRSSCTICKITFSDKKSYYRHRKNVHKSTIQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQPEVSQDIEADMENEQESVDPSVDYQARYPCDTCGKQFLGLLSLQNHQCINQIPAQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDAAQVAKVQHVPPPVATVAKRRLPPEVEVTVVNPNKKLRSDDSELEQSSGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGESSSAAGQAEAEADEETEEVGVSCEVCGAACADAAALRAHRARHHAEESGSESESDGEASSAGAAPPGEFTCGQCGDGVATPRDLIAHRAMHAAPTKFFCNICKVYFSRALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00851013;
90% Identity: -
80% Identity: -