Druf004503.1
Basic Information
- Insect
- Drymonia ruficornis
- Gene Symbol
- ZNF341_1
- Assembly
- GCA_947859195.1
- Location
- OX401917.1:4224136-4230110[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.82 49 4.7 0.0 2 23 64 87 63 87 0.93 2 29 8.3e-05 0.005 17.3 0.4 3 23 94 115 93 115 0.94 3 29 0.0014 0.085 13.4 3.8 2 23 120 142 119 142 0.93 4 29 0.0034 0.21 12.2 2.7 1 23 147 170 147 170 0.94 5 29 2e-05 0.0012 19.3 5.2 1 23 174 197 174 197 0.97 6 29 0.00042 0.025 15.1 0.3 2 23 204 225 203 225 0.96 7 29 0.079 4.7 7.9 0.0 2 23 246 268 245 268 0.91 8 29 0.0012 0.073 13.6 1.3 1 23 288 311 288 311 0.97 9 29 0.0021 0.13 12.9 1.5 1 23 316 339 316 339 0.96 10 29 0.0032 0.19 12.3 0.2 1 23 344 367 344 367 0.97 11 29 0.00063 0.038 14.5 1.9 2 23 370 392 370 392 0.96 12 29 0.11 6.5 7.5 1.1 1 20 399 418 399 420 0.94 13 29 0.042 2.5 8.8 1.9 1 23 475 498 475 498 0.95 14 29 0.89 53 4.6 0.1 2 23 571 594 570 594 0.93 15 29 9.3e-05 0.0056 17.1 0.3 3 23 601 622 600 622 0.96 16 29 0.0013 0.08 13.5 0.8 2 23 627 649 626 649 0.93 17 29 0.12 7 7.4 0.2 2 23 655 677 654 677 0.92 18 29 5.4e-06 0.00033 21.0 3.0 2 23 682 704 681 704 0.97 19 29 0.00057 0.034 14.7 2.8 2 23 711 732 710 732 0.96 20 29 0.89 53 4.6 0.5 1 23 785 808 785 808 0.88 21 29 0.02 1.2 9.8 0.1 2 23 839 861 838 861 0.94 22 29 0.0056 0.33 11.6 1.9 2 23 884 905 884 906 0.95 23 29 0.00083 0.05 14.2 1.7 1 23 911 934 911 934 0.97 24 29 0.17 9.9 6.9 0.2 1 23 939 962 939 962 0.87 25 29 0.0016 0.098 13.2 0.7 2 23 968 990 967 990 0.93 26 29 5.5e-05 0.0033 17.9 0.2 2 23 998 1020 997 1020 0.97 27 29 0.17 10 6.8 0.0 2 23 1027 1048 1026 1048 0.95 28 29 3.2e-06 0.00019 21.7 1.1 1 23 1054 1076 1054 1076 0.94 29 29 1.1e-06 6.5e-05 23.2 0.4 1 23 1082 1105 1082 1105 0.97
Sequence Information
- Coding Sequence
- ATGAAAAAATGCAAAGGTTCTAGGGTTTCCGTTAAAATCAATGTCGCTGACATAGCGTGCAAGCTCTGCACACTACCCATGGACAATTTGGATGCACTAATCGATCATCTAGTTTCGGAACACAAAGCGAAATACGACAAATCAATTGGAGGCTGTTTAGAACCCTTCGAAATTACAAAAGATAGCATACCGTGTCCGTTATGCCCCGACCGTGTGTTCCGATACTTTGGAATCTTACTGCGTCACATGAACTCTGAACACACCAATAATAACAGAATCTGCGACTTCTGCGGCCGTAGTTTTCGCAACGTCACTAACTTAAAAGTGCATTTAAGTTACGCGCACTCTGGTTCCTGCGAATGTGACGTTTGTGGCTTAAAGTTCAAGAACCAAAAGTGTCTCGCTCGGCACAAAGCGAAAGCTCACGACGTGAAAGAGTACAAGTGTTCGAAATGTCCTGAACTGTTCAAATCGTCGTACCACaagcagaagcatttgattgaagtccataatattggacacagatgtagttactgcgataagatgttcactaggaactcgtttatgaaagatcatattcgcaggacgcatttgaaagagaaaaacgttccttgctctgtatgcaatgagaagttcttcgataactatttgctgagaatgcacatggtgaaacacgacggtgaaagaaagttcaattGCAACCAGATCGAGATCAAAATCGATGTCTCTGATATCACTTGCGATGTATGCAACGAGCCTTTTAATCGATTTGAGGAGATTATTGATCATTTAATCGGTAAACATGGCTTAGAGTACGATAAGAACATCAATACTCCTTTCCAGGAGTACCGCTTGGTGGATTTCCGATGCCTGTATTGTGAGGAACAGTTCTCCTACTTCGGCCATTTGGTCAAACATGTGAATATTGTACATCCTCATAATTGCTTTATCTGCGATGATTGTGGCGTCACATTCAATAAAAAGAGGGATTTGGCGTGTCATATTCGTAATTATCATAAACTTGGAGGATACCCGTGCGATTTGTGTCTCCAAAACTTTGACACGTGGCTGTCGCTACGTGCACATCGGAATAAAGTGCATTTTAGACGCTGCAATAGTTGTCATCTCAAGTTTTCGTCCCTGGCGCTTCTACAAAAGCACATAAAAATCGATCATCCGAAGACAGATTGCGATTTCAAATGCAGCTACTGCTCCAAAGAGTTGCACTCTTCTATAGGTTTGAGACAGCATGTCACTAAATGTAAAGTGAAACCTGCCTCCCAGGCAGACTCCGACCCCGCGTTGGGGATCACCGACATCGGTGATCAGCCACAAAAGAATCAGAATTTACAGCAAATGAGACAGAATATACAATGTGTGCTGAACATGTCCACAGCCACACCTTTTAAATTCTTATCCAATTTTTCTTGTTTCTATTGCTCAAAGAAGTTTAACGAATTCGGTGAGGTAAAACAGCATACGAATTTGGAACATCCAGTATGCGATCTCAAATCTAAATCAATGAAGAAGTGCAAGGGTTCTAGAGTCTCTGTCAGAATCGACGTCTCTGACTTAGCTTGCAAGCTCTGCACACTGCCCATGGACAATTTGGATGCACTAATCGATCATCTAGTTTCGGAACACAAAGCGAAATACGACAAATCAATTGAAGGCTGTTTGGAACCCTTCGAAATAACAAAAGATAGCATACCGTGCCCATTATGTCCGGACCGTGTCTTTCGGTATTTCACAATATTATTACGTCACATGAACTCTGACCACACTAACAACAATAAAATTTGTGATTTCTGTGGTCTTAGCTTTCGTAATGTCTTCAACTTAAAAGTGCATTTGAGGAACGCCCATACTGGTGCTTGTAAATGCGTCATTTGTGGCATAGAATTCAAGAATCAGCCGAGTCTCGCGAGCCATAAAGCTAAAACTCACGATGTTAAAAAGATCAAGTGTCCGAAATGCCCTGAACTGTTCAATGCTGCGTACCAAAGGCAGAAACATTTGATCGAAACCCATAATATTGGGAGCAAATGTACCTACTGCGATAAGATGTTCACTAAGAATTCGTTGATGAAGAATCACATTCGTAGAACGCATTTGAAAGAGAAAAACGTATCATGCTCTGTATGCCATGAGAAGTTCTTCGATAAGTTTTTACTGAGGAGGCACATGGTGAAACACGACGGTGAAAGAAAGTTCAATTGTGCCAAATGCAATACAGTGGAGGACAAATTTAAGAAAATGGAGGTCGCACGTAAGCTATTAATAAAACGGCGTAACGTTGAATACGTGCTGCAATACAGCAACGTTACACCCTTCATGTGGCATAAGGGCAGATACAAATGCTTCTATTGCTCTGAAACCATGAAAGATCCAAGCATACTCCGCGAGCATACGGTCAATATGCACCAATTCGCGAACCTAGAACTGGTCGTATATGATAGGACTAAGAATAACAGAAATAGGGATGCTGCAGTCAAAATAGATGTCGCAGGACTCGAATGCAAGCTCTGCCCTCAATCTATTAACAATTTAGAAGAGTTAATACACCATTTGATCATAGCGCATGACGCTGAGTACGATGTCAGCGTACCAAACTGTCTCCTACCCTTCAGATTGGACAAGGACCAACCAACTTGCCCAACCTGTGACATGAAATTCGTTTTCTTTGAATACTTACTAAGACACGCGAATAAACACCATCTATCCCATCACTATATCTGTGATGTCTGCGGTACCAGCTTCCAGGGGGAGAACCATTTGAAAATGCACTACAGATACTACCATAGGGAAGGGGGGTATACTTGTGAATATTGCGGGATCAGTCTCGCGACTTTATCTCGTAAGATTCTTCATGAAAAGAACGTGCATTTGGTCAATCTGTCTACCTGTCCTCACTGCCCAGAGACATTCAAGAGTCCGTATCTAAAGAAGCTTCATTTAGCTAATGTTCATGGGGTGGAAGAGCTGAAAATCAAGTGTCCGTATTGCCCAAAGGTCTTTCCCCAGGAGTCTATAATGTCCCGACATATGAGGAGAGTGCATTTGCGAGAGAAGAACGTGGAATGCGAGGTCTGTGGGGACAAGTTCTTTGGACCTTATGACGTCAAACTACACATGGTGAAACATAACGGGGAAAAGAAGTTCGTATGCACCGTATGCGGGAAGAAGTTCTCCAAAAGGAGCAATTTGAATTCTCATTCTATTTTACACACGAAAGAGAGGAACTATGTGTGTGGCGTGTGCAACAAAGTGTTTGGGCAGCAATATAATTTGAAAATACATATGCAGAACCGACATTCTCAGTTGGAACAGAATGTGGATGAATTAAATGACAATCAGTTGGTACAGCTGGAGATTATACACCAGGATTTGGAAGCGACTGATGCGGAGCAGTATATACAGTGA
- Protein Sequence
- MKKCKGSRVSVKINVADIACKLCTLPMDNLDALIDHLVSEHKAKYDKSIGGCLEPFEITKDSIPCPLCPDRVFRYFGILLRHMNSEHTNNNRICDFCGRSFRNVTNLKVHLSYAHSGSCECDVCGLKFKNQKCLARHKAKAHDVKEYKCSKCPELFKSSYHKQKHLIEVHNIGHRCSYCDKMFTRNSFMKDHIRRTHLKEKNVPCSVCNEKFFDNYLLRMHMVKHDGERKFNCNQIEIKIDVSDITCDVCNEPFNRFEEIIDHLIGKHGLEYDKNINTPFQEYRLVDFRCLYCEEQFSYFGHLVKHVNIVHPHNCFICDDCGVTFNKKRDLACHIRNYHKLGGYPCDLCLQNFDTWLSLRAHRNKVHFRRCNSCHLKFSSLALLQKHIKIDHPKTDCDFKCSYCSKELHSSIGLRQHVTKCKVKPASQADSDPALGITDIGDQPQKNQNLQQMRQNIQCVLNMSTATPFKFLSNFSCFYCSKKFNEFGEVKQHTNLEHPVCDLKSKSMKKCKGSRVSVRIDVSDLACKLCTLPMDNLDALIDHLVSEHKAKYDKSIEGCLEPFEITKDSIPCPLCPDRVFRYFTILLRHMNSDHTNNNKICDFCGLSFRNVFNLKVHLRNAHTGACKCVICGIEFKNQPSLASHKAKTHDVKKIKCPKCPELFNAAYQRQKHLIETHNIGSKCTYCDKMFTKNSLMKNHIRRTHLKEKNVSCSVCHEKFFDKFLLRRHMVKHDGERKFNCAKCNTVEDKFKKMEVARKLLIKRRNVEYVLQYSNVTPFMWHKGRYKCFYCSETMKDPSILREHTVNMHQFANLELVVYDRTKNNRNRDAAVKIDVAGLECKLCPQSINNLEELIHHLIIAHDAEYDVSVPNCLLPFRLDKDQPTCPTCDMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCGISLATLSRKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHLANVHGVEELKIKCPYCPKVFPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGEKKFVCTVCGKKFSKRSNLNSHSILHTKERNYVCGVCNKVFGQQYNLKIHMQNRHSQLEQNVDELNDNQLVQLEIIHQDLEATDAEQYIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -