Basic Information

Insect: Drymonia ruficornis
Gene Symbol: -
Assembly: GCA_947859195.1
Location: OX401914.1:4526580-4554361[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.00026 0.016 15.7 2.6 1 23 400 422 400 422 0.97

2 20 0.0038 0.23 12.1 0.6 1 20 428 447 428 450 0.94

3 20 1.9e-05 0.0011 19.3 5.6 1 23 469 491 469 491 0.98

4 20 1.8e-05 0.0011 19.4 3.9 1 23 497 519 497 519 0.99

5 20 3.4e-05 0.002 18.5 5.3 1 23 525 547 525 547 0.97

6 20 1.3e-05 0.00076 19.9 7.7 1 23 553 575 553 575 0.97

7 20 4.4e-07 2.7e-05 24.4 2.7 1 23 581 603 581 603 0.98

8 20 9.2e-05 0.0055 17.2 6.7 1 23 609 631 609 631 0.97

9 20 9.1e-05 0.0055 17.2 6.5 1 23 637 659 637 659 0.97

10 20 4.4e-07 2.7e-05 24.5 1.9 1 23 665 687 665 687 0.98

11 20 4.5e-05 0.0027 18.1 7.9 1 23 693 715 693 715 0.98

12 20 2.3e-05 0.0014 19.1 6.6 1 23 721 743 721 743 0.98

13 20 4.1e-06 0.00024 21.4 5.2 1 23 749 771 749 771 0.98

14 20 4e-06 0.00024 21.5 5.4 1 23 777 799 777 799 0.96

15 20 1.9e-06 0.00012 22.4 5.0 1 23 805 827 805 827 0.98

16 20 2.8e-06 0.00017 21.9 6.0 1 23 833 855 833 855 0.98

17 20 5.1e-05 0.0031 18.0 7.8 1 23 861 883 861 883 0.97

18 20 1.1e-05 0.00064 20.1 6.2 1 23 889 911 889 911 0.97

19 20 0.00049 0.03 14.9 0.3 1 23 918 940 918 940 0.96

20 20 0.3 18 6.1 5.0 1 23 953 975 953 975 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.00026	0.016	15.7	2.6	1	23	400	422	400	422	0.97
2	20	0.0038	0.23	12.1	0.6	1	20	428	447	428	450	0.94
3	20	1.9e-05	0.0011	19.3	5.6	1	23	469	491	469	491	0.98
4	20	1.8e-05	0.0011	19.4	3.9	1	23	497	519	497	519	0.99
5	20	3.4e-05	0.002	18.5	5.3	1	23	525	547	525	547	0.97
6	20	1.3e-05	0.00076	19.9	7.7	1	23	553	575	553	575	0.97
7	20	4.4e-07	2.7e-05	24.4	2.7	1	23	581	603	581	603	0.98
8	20	9.2e-05	0.0055	17.2	6.7	1	23	609	631	609	631	0.97
9	20	9.1e-05	0.0055	17.2	6.5	1	23	637	659	637	659	0.97
10	20	4.4e-07	2.7e-05	24.5	1.9	1	23	665	687	665	687	0.98
11	20	4.5e-05	0.0027	18.1	7.9	1	23	693	715	693	715	0.98
12	20	2.3e-05	0.0014	19.1	6.6	1	23	721	743	721	743	0.98
13	20	4.1e-06	0.00024	21.4	5.2	1	23	749	771	749	771	0.98
14	20	4e-06	0.00024	21.5	5.4	1	23	777	799	777	799	0.96
15	20	1.9e-06	0.00012	22.4	5.0	1	23	805	827	805	827	0.98
16	20	2.8e-06	0.00017	21.9	6.0	1	23	833	855	833	855	0.98
17	20	5.1e-05	0.0031	18.0	7.8	1	23	861	883	861	883	0.97
18	20	1.1e-05	0.00064	20.1	6.2	1	23	889	911	889	911	0.97
19	20	0.00049	0.03	14.9	0.3	1	23	918	940	918	940	0.96
20	20	0.3	18	6.1	5.0	1	23	953	975	953	975	0.99

Sequence Information

Coding Sequence: ATGAATCCGGAGCACCATAATATGAATACGGGTGGTGGCCAGCCTCCGGGAACAGAGTCACAGAATCAGAGAGTTTCGGCGCAGCAGCAGCAGAGCTTGCCGCCCACGACGTCCGCCACTGACCTCCGGGTGAACTCGGCGGCGGTGAACGTCGCTTTGTCCAGTGTAGCTAAATATTGGGTGTTTACTAATCTGTTCCCTGGGCCGATACCGCAAGTTTCTGTGTACGGATTACCCGCTAGCAGAATCGAAAATGGAAAACCCGTGCAGGATCTCGGTCAAGCGCACGCCAGTATACTGAATGGTGACCCGAACATCATTCTCGGACACCATGCTGGTCAATCACAGGTCACTGTCTCTGCAGGGGCACAACAGATACCTGTATCACAGATCATCGCCACACAGGCTGGCCAAACACATGAAGCTCTTGTGGGCCACAGCCAACAACAGGAGCTCGCCGTACAACAGGGCTCGAGCAACAGCGGCCAGATCACTGTTGCCACAGGCCAGCCCACCCATCAGCAGGGCCATCATTCACAACAACACTTAATGCAACAGCAACTAATGGCCACAGCTAGACCCGAACACACCAACCAACAGATACAACTGACTGTGAGTGAAGACGGCATCGTGACGGTGGTGGAGCCAGGAGGCGGTAAGATGGTCGACAAGGAGGAGCTGCATGAGGCCATCAAGATGCCCAACGATCACACCCTCACTGTGCACCAGTTGCAGCAGATTGTCGGACAACAGGTCATAGACAGTGTAGTCCGCATAGAACAAGCGACCGGTGAGCCAGCAAATATACTAGTGACGCACAACCCCGACGGCACTACTTCGATAGAAGCCAGCGCGGCCGACCCGCTACTCGTCAAAGACGAGAAAGCCTCCAAACTAGAGACTGCACAGTTTGCAATACCAGCAGAGATAAAAGACATTAAAGGAATAGATTTAAAGAGTGTGGGCGCAATGGGAATGGAAGGTGCGGTTGTAAAGATCTCTACGAGCGGGTCGGAACATGATCTCCATGCTATGTACAAAGTGAACGTAGAAGATCTCTCGCAACTACTAGCATATCACGAAGTCTTTGGAAAACTTAACACGGAAGGACAACCACAGGCTAAGGTGATAAGTGAGGTGGAAGTGGAGCCGGGTACGAGCGCCGGCATGTCAGAAGCTGAATCTTCACCCGGACACCATTCTTGTGACCTCTGCGGGAAGATATTCCAGTTTCGATATCAACTGATTGTTCATAGGCGATATCACGGCGAAAGCAAACCCTTCACGTGTCAAGTGTGCGGCTCTGCGTTCGCCAATCCTGTAGAATTGTCCAGGCATGGGAAATGTCATCTTGCCGGTGATCCCAACGAAAGACAAACTAAGCGGTTGGCCCAAGACAAGCCATACGCATGCACCACTTGCCATAAAACATTCTCAAGGAAAGAGCATTTGGACAACCATGTCCGTAGCCACACTGGGGAGACACCGTACAGATGCGAGTACTGCGCGAAGACGTTCACCCGTAAGGAGCACATGGTCAACCACGTGCGCAAGCACACGGGAGAGACGCCGCACCGCTGCGACATTTGCAAGAAGAGCTTCACGAGGAAAGAGCACTTCATGAACCACGTCATGTGGCATACTGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTGTTGAACCATATGAGGTCGCACACAAACGATACCCCGTACCGATGCGAACTCTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATATTGTGGCATACGGGCGAGACGCCGCACCGCTGCGACTTCTGCTCGAAGACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCAGCAAGTCGTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGCCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGCCCCAAGGCGTTCACCAGGAAGGATCATCTCGTGAACCACGTGCGCCAGCACACGGGCGAATCGCCGCACAAGTGTTCGTTCTGCACCAAGTCGTTCACCCGCAAGGAGCACCTCACGAACCACGTGCGGCAGCACACCGGCGAGTCTCCGCACCGCTGCACCTACTGCGCCAAGTCCTTCACTAGGAAGGAACATCTCACGAACCACGTCAGACAGCACACGGGAGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCCTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGCCAGCACACCGGCGCCACGCCGCACGCCTGCACCTACTGCACCAAGAGCTTCACCAGGAAGGACCACCTCGTCAACCATATACGGCAACACACTGGCGAGACGCCGTTCAAATGTACGTACTGCTCGAAGTCGTTCTCGCGCAAGGAACACCTCACGAATCACGTGAACCTGCACACTGGCGAGACCCCGCACAAGTGCCCGTTCTGCACCAAAACGTTCTCGAGAAAGGAACATCTCACCAACCATGTCAGAATTCACACTGGTGAATCGCCGCACCGCTGCGAGTTTTGCCAAAAGACATTCACTCGCAAGGAGCACTTGACGAATCACTTGAAACAACACACGGGCGATACTGCGCACTCGTGCAAAGTATGCTCTAAGAACTTCACTAGAAAAGAACATCTTGTTACGCATATGAGGTCACACAGTTGCGGCGAACGGCCCTACAGCTGCGGCGAGTGCGGCAAGTCGTTCCCTTTGAAAGGCAATCTGCTGTTCCACGAGCGGTCGCATAATAAGGCCAACGCCAATGCTTCGGGTAATAGGCCGTACCGATGCGACGTATGCTCCAAGGAATTCCTCTGCAAAGGTCACTTAGTATCGCATAGACGCACGCACGCGGATAGCGGCGAAGCGGTCGCGGGCGAAGCCCCGGCCGAGACCGACGACTGCACTAGCAAGTGTGTCAAGGCAGAGCCGGTAGAGAGGAAGCATGAAGTCAGACAAACAACAACAGAAAATAGGCCGGCCGAGAGCAACGTCGTACAAACCCAACAAAGCAACCCTACTGTGATGCAAATAACCAATCCGCAGGTTCGCACGGTATCGGTGACGAGCGGCGGCGTGACGACGGGCACGTTCACGCACAGCGCGGCCGCGCAGCACCACGCCGGCGCCGCGCTGGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNMNTGGGQPPGTESQNQRVSAQQQQSLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPASRIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAGAQQIPVSQIIATQAGQTHEALVGHSQQQELAVQQGSSNSGQITVATGQPTHQQGHHSQQHLMQQQLMATARPEHTNQQIQLTVSEDGIVTVVEPGGGKMVDKEELHEAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLLVKDEKASKLETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISTSGSEHDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQPQAKVISEVEVEPGTSAGMSEAESSPGHHSCDLCGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERQTKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLLNHMRSHTNDTPYRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGATPHACTYCTKSFTRKDHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTAHSCKVCSKNFTRKEHLVTHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHNKANANASGNRPYRCDVCSKEFLCKGHLVSHRRTHADSGEAVAGEAPAETDDCTSKCVKAEPVERKHEVRQTTTENRPAESNVVQTQQSNPTVMQITNPQVRTVSVTSGGVTTGTFTHSAAAQHHAGAALAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01073786;
80% Identity: -