Druf007285.1
Basic Information
- Insect
- Drymonia ruficornis
- Gene Symbol
- -
- Assembly
- GCA_947859195.1
- Location
- OX401913.1:10954706-10959208[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-10 6.8e-07 29.0 0.0 8 35 44 72 39 76 0.92 2 2 4.2 7.2e+03 -3.1 0.0 2 10 99 107 99 108 0.85
Sequence Information
- Coding Sequence
- ATGTTAGCTCCAGAATATAAATACCTGAAAGAGGTTGCACTTGCATCTAAGCCTAAACGTTCTAAGAAGAAGGCGAACCGAAAGCCAATAACGGAGCGTCGTATGTATAACTTGGACAGCGTCAAGATGGCCCTCGACAAAGTCTTGTCTAAAGAGATGACCATGTACCAAGCAGCGGCTACGTACGGTGTTCCTAAAACAACGTTGTACGATAAAATCACATTGTTGAGAAAGGGACACGAATTGAAATTGGATAAGAAAACAGGAAGAAGTAAGACCTTCACTTTGGAATTTGAAGAACGTTTGATCCGAGCCGTGAATCAGTTCGCTCAGCAAGGAACCCCGCTGAATCAGGACGAGTTCTTGAGACTCGCGTACACTTATGCCGAGGACTTAGGATTGCCACACACGTTTAATCGTGAAAAAGGCAAAGCAGGGAGATGTTTCTACCAAAATTTTATTCGTCACAATCCTGATCTCAAAATAATAAAACCACGGAAAAAATGTATACCATACGAGACTATACCTTCGGGCAGAGGGAAGCAACAGCTGCTCCTCATAGAAGGCCACACATTTTCTGTACAGGGAGGGAACCCGTATAAATACTATTGCTCCAGGAAATCTAGGACTAGTTGCCCAGCAAGAGTTACACTGGACCAGGCTAAGCAGATCATCTCTGTGGACCCCTACCATAATCATCCGCCGCCGCGGTTGCATAGGACGTGTACTGGAGAAGTTATTATACTTAAATGA
- Protein Sequence
- MLAPEYKYLKEVALASKPKRSKKKANRKPITERRMYNLDSVKMALDKVLSKEMTMYQAAATYGVPKTTLYDKITLLRKGHELKLDKKTGRSKTFTLEFEERLIRAVNQFAQQGTPLNQDEFLRLAYTYAEDLGLPHTFNREKGKAGRCFYQNFIRHNPDLKIIKPRKKCIPYETIPSGRGKQQLLLIEGHTFSVQGGNPYKYYCSRKSRTSCPARVTLDQAKQIISVDPYHNHPPPRLHRTCTGEVIILK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -