Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947859195.1
Location
OX401908.1:2413820-2414744[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 7.4 5e+03 -2.3 0.0 16 25 30 39 28 40 0.71
2 4 8.1e-17 5.4e-14 52.0 8.8 2 52 44 94 44 96 0.97
3 4 3.2e-06 0.0022 18.0 4.7 25 55 81 111 81 117 0.92
4 4 2 1.3e+03 -0.5 0.1 14 39 132 157 129 161 0.83

Sequence Information

Coding Sequence
ATGAGCGCTCCGATAATAATCACGGTGCCCAACAACTACTTGACGGTGGACGATATGGAGACGAAGGTGGTGGTGGACGTGGGCTCCCCCTCGCCCTCCCGGAAGCGGCGGCTGGACCACCTCACTTGGGAGGAGAAGATGCAAAGAAAGAAGCTGAAGAACCGCGTGGCGGCACAGACCTCGCGGGACAGGAAGAAAGCGAAGATGGACGAGATGGAAACTAGGATAAACTATTTTATTGAGCGTAACGAGCGGCTCACGAAGGAGGTGGAGAGCTTGAAGGCGCTGAACGAGCGTCTGCTCAGCGAGAACGCATCGCTTCGCAGCGAGGCGGCGGCGCGGAGCGTCGCGGCGGCCCCCGGACCGGCAGCGTCCGACCCTCAGCAGAAGGAGGGGGCCCCGACGGCGGTCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCTCACCTCGACTCAGAAGAGTACCTCGATACCCTCCATCAACTTGCAGACTCCCTCTTCCAAGAGATTGATGCGAGTGTTGCAGGAGCGGCTCAAAATGTAA
Protein Sequence
MSAPIIITVPNNYLTVDDMETKVVVDVGSPSPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMETRINYFIERNERLTKEVESLKALNERLLSENASLRSEAAARSVAAAPGPAASDPQQKEGAPTAVRAARLLLAMCLLSQTSSLTSTQKSTSIPSINLQTPSSKRLMRVLQERLKM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
-
80% Identity
-