Basic Information

Gene Symbol
GATA-B
Assembly
GCA_032432895.1
Location
JAOYRS010000005.1:58982-67125[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-18 2.1e-14 53.3 3.9 1 34 156 188 156 190 0.97
2 2 1.3e-18 5.2e-15 55.2 6.7 1 35 209 242 209 243 0.97

Sequence Information

Coding Sequence
ATGAAACTGAATATTACAAACGGTGGTGGGGGCGGCGGAGGCGGCAGCTCGGTGTACACGCGCTGCTCCTACCCGGCCGCCGGCTCTCCTTACTTCAGCAATGGAGCTGATCTCACCCAGCCACAGATATGGACCAACAATGCTGGAGGATCTCCCAGCTACGGCACAGGCAGCACCGGCACCGTCCTCGGAGATGAATACCCAGAGGGCAATGAGCCAGGCGACGGTGGCGCAGGGGGCGCGAGCGGCGCGGGTGGCGGAGCCCTGCCCGCCTTCAGCGCGAGATTCGGAGGCGCCTTCGCGACCACCTCCAGACCCTCTGCCGTCTACGGCACGTCTACGCTAACCGCAAACTACACTCATCCGGAAGTATGGAGCTTGGACGGAAGCCGTCGGCCGCAGCTCTCGGCCGCCGCCAGCCTCTCTGCCATCGAAATCGCGGAGTTTTTCACGGAGGGGCGTGAGTGCGTGAACTGCGGCGCGATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGACACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCTGATGGGCACCAAGCGGCCAGGTATGTCGTGCACCAACTGCCAGACGACCGCGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCGTGCGGACTCTACTACAAGCTGCACAACGTCAACCGACCCATCACCATGAAGAAGGACTCCATACAGACGAGAAAGAGGAAGCCTAAGAACAGCATCAAAGCAGAGAGAAGTCTGAACAAAAGCATCGGGCACGCGCTGCACGCCGCCAGCGCCATCGGCGGCGGCCCCACTGTCAAAATAGAAAACCTATTAGAAAGTAGCGGCGTGAACGCGGGCGCTAACTCCCCCCTCACGTTGGGCTTCTACGTGCAGCAGCACGGCGTGAAGCTGGAGGAGCCCCCGccggcgcacgcgcacgcgcacgctcACGGGCACGCGCAGGCGCATGCGCACTCGCACACGCACGGGCACGCGCACACGCAGTCGCAGGCGGCGCACGCGCACCACCAGCCGTACTGCGGCGAGGCGGAGTTCCGGCGGGCGGAGCCGCAGGAGCGCCTCGAGCGCCCCACCGTGGTGTCGCTGGGCAGCTGA
Protein Sequence
MKLNITNGGGGGGGGSSVYTRCSYPAAGSPYFSNGADLTQPQIWTNNAGGSPSYGTGSTGTVLGDEYPEGNEPGDGGAGGASGAGGGALPAFSARFGGAFATTSRPSAVYGTSTLTANYTHPEVWSLDGSRRPQLSAAASLSAIEIAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLMGTKRPGMSCTNCQTTATSLWRRNAHGETVCNACGLYYKLHNVNRPITMKKDSIQTRKRKPKNSIKAERSLNKSIGHALHAASAIGGGPTVKIENLLESSGVNAGANSPLTLGFYVQQHGVKLEEPPPAHAHAHAHGHAQAHAHSHTHGHAHTQSQAAHAHHQPYCGEAEFRRAEPQERLERPTVVSLGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00458530;
90% Identity
-
80% Identity
-