Dpha021353.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000096.1:2594700-2608071[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 1.6 1.2e+02 3.9 2.9 1 23 265 287 265 287 0.97 2 12 7.5 5.7e+02 1.8 0.9 1 13 337 349 337 356 0.77 3 12 0.75 57 4.9 2.8 1 19 436 454 436 455 0.92 4 12 8.9 6.8e+02 1.5 1.0 1 13 462 474 462 484 0.75 5 12 0.039 3 9.0 0.1 3 23 800 820 798 820 0.96 6 12 0.0063 0.48 11.4 3.9 3 23 903 923 902 923 0.95 7 12 0.013 1 10.4 0.3 2 23 939 960 938 960 0.96 8 12 4.1e-07 3.1e-05 24.6 1.6 1 23 966 988 966 988 0.98 9 12 5.5e-05 0.0042 17.9 0.9 2 23 994 1015 993 1015 0.95 10 12 9e-06 0.00069 20.4 0.6 2 22 1022 1042 1021 1042 0.94 11 12 0.12 9.3 7.4 0.7 1 20 1047 1066 1047 1068 0.97 12 12 0.0021 0.16 13.0 0.2 3 23 1079 1100 1078 1100 0.96
Sequence Information
- Coding Sequence
- atggaGGCAAATAACAAGAAACGGTGTAGGAAATCGAAATTGGTGCCGCGCAAGTATTCAGATTCTGATGATGAAAACATAGCTCTAATGCAGCAAGAGATCGAACTCGAGCTGGCTAACATAAAGGCGCAGTCGTTACTTAAGAAACTAAGCGCGAGTAACTTGAACAGTGACAAAGACTTTCAATTTTCCATTAAAGTTGAAATTGAAACATGCAATGAGGAACATGAGGACGAAAATACAAATGTTATTGATAACAGTCCAATAACGGACACTAGAAATGATGAAAGTTTAATGAAAAATGATACAGACAAAGTTACAGCGGGTGCGAGTTCAGAAATTGTAGAGGTGAAGACGGAAGAAGTAGATGTATCTATTAAAGAAGAATTAGGCGTGGATATTGTGGTGAATTTTGAGACTTTAGATGGGGAAACagatttacatacaaattgctCGGGTAATGATCTTTCTGAGGATGACAATGTTAGGCAAGACACTTGTATTGAAAAAAGTGACATTAGAGTGGAATCGGTTACAAGTTTAGCGTGTTCCGGCGTGGCTGTTTCTTACAATATCACAGACGAAATGATTCTACATGAATTTCAAATGACCTCCAAACAGACTACCAGTGACGCTGACAAGCTCATAGAAATGCGACTTAGGAATTACTATGCTAGAGACGTCACGGGCACTCCCACTGAATGCCGGATAGATGCTGGTATCCAAGAGGCCCTATCCAAGTGGAAAACCTGGCAATACTCCTACCCCACTGTGCGAGGTCCACCACTGCTGTACATATGCAGCTCTTGTAAAATAGGGTTTTGGCATTTGCACGACTTTCGAGAACATCTCCGTGATCACGCGTACATAAATATCTCGTTTGTTAATGAGGAACATTTGAGCTACATTATTGGACACATATCGAGGAACGCCAATAAAATGATCTTGAGTTTGGATTCGAATTGTTGGAGATGCGGCAAAGGGTACAAAAATCACAACGATGTTTGTTTCCAGTGCAACGGATGCAATAGTTACTTTGAAACTTGCCTGATGATGTCCATACACGAGGGTGTCTGCGAGGATCACAAGAGGAAGTATGCCAATTCGGAGGACACCAATGTGCAGCGAAACTGTCCCGTCTGTTCGTACAAGCATTGGAGAGAGGAGGACATGCAACGCCACATACTGGAGTATCACTCAGTAAGAAGTGACGTTCCCATGACCTGGTCCACCAAAAAGTGCATAAAATGTGGGCATATGTACAATTATCACAGCTTGCATGAGTGCATTGAGAAACCGCCGATACACGCCTGCATGTTCTGCTTTAGAAAGTTTCGCAATAAACACAATATCATGATACACTACTGGGTGACGCCACCCGATTTTGAGTGTAGGGTTTGCAAGAAAGTGCTGAGGAAAGAGTGCATGGAGCTGGATCACTTGCTAAGTCACTCGAGTTGCTACAGTTTTGTTTATAAGTGTATAGCGTGCGCGGGGTCGCCATGCTTCCTGGTGAAGGACGGACAACTGGACCATAAGCACGCGTGCCACAAGAGAGTGAGGAAGCCGCTGTTTGAAaggATAATTGTACCGAACTCtcttttatacaaattacaaaataaaaattctaatcagAAACAGATCTGCAGTCGAGAAGCAAATGTTCCACCGGTAAAGAATGCTGTTTTTGATTACAATTTGGATGTAGTCAAAACCATAGACGCTGATGGTGGTGGAGTACCAAAACTTTGTGATGCtggcgtaaataaaaaaaaaccgaatataattttaaatgtcaaacgAGAGCCCGCTCATAGTGGGAGTGATGAAATTAAATCGAAAATTAAACTGAGCAGCACATACAGACGAGATGGCACCAAGAGAAAAGCTGAAATTCCCATAGAGAATGATGGGGACGTGAAGAAGATGGCCATTTCCGAGTGGACAGGGATAAAACAAGAGCCGATtgattttgatgattttgtGTGTGTTGAAGTCAACGAACGGTTGAAGTCGGGGCTTGAAGTTAAAGGTTTGAATTTGCCGATCAAGTTTGAAGTTAAAGAAGAATTTGGTGTGGTCGACATTGGTGGAGGGGATGGTGGTGATGGTGATGGTGATGGTGATGTGGCTGGTGATGATCTGGAAGATATTGCGGATGAGGATTGGAACCTACAGTTGTTGAATGAGGATGGGGGTATAAAAAGcaaacgcaagaaaaaaaataacacatatagCATGAatgcaaaaacgtataaaaagtttgGCGGTGAGAAATATCTCAAGAAGATGCACCAGGACAATCAGTTCTACCGCTGCTCTAAGTGTTGCTGCGTGTTcagaaatttctataaataccTTCTACATTTCACTTCGCACAAATACAGGCCGATGGCTTGCCCGCAGTGCACCGCGGAGTTCAACTCCGTGGACACCCTGTCGCAGCACGTCAACTTGCACATTAAGTACAATTTCGTTTGCATCCATTCGATAAAAACCGAAAAGGGCGATAGAAATTTTCAATGCAAGAATTGCAAGGAGCTATTGAGTGTTAGTGAGTTTTTCTTGCACTGGGACAGGCATTTGGTATTGCAAGAATCTAAGGAGCCAGCTGTTTGTGTCGTCAATATGGATGGCAAGCCCAAGTTGAAGGAGATGGTTGAACATATACAGAACCCGGACAAGTGTCTGTTCAGATCCAGAAACTGTGTAGAGTGCAACAAGCGGTTTCACAGGCGGAACGATTTTAAAAGGCATTACATTGAGCATTTATTGGCCGACGCCTATATAGAGCTGACTAAATATGGCCACCTCAAGTGTCAGATATGCGGTGCTGGGTTCCAGAGTGGTGACAGGTACAAGCGCCACCTGCGCGACCACGCGTCGCTGCCCGTGTACCAGTGCGAGATGTGCGACAAGGCGTTCAGCGACTCCAGCAACTTCTCGAAGCACAAGAAGGTCCACAACCTGGCCGTGCTGATCTGCGACACCTGCGGGAAGAAGTTCCAAAACAAGCAGTACCTGATAAAACATTTGCAGCTCCACACTACGACGAAGCCCATAGAGTGCGAGGATTGTAATAAGGTTTTTTATTCACAATCCCAGTATAGAAGGCATTTGAAGAAGAATAAACCTAAATACAGGTGTCAGATATGTAGAGCGGCGTTTAAAACCGTTAAAGATAGATGTAATCATATGTGGGAGGCACATCAGATAAGGAACTGCGAGGCGGACTGTCCCGTCTGTCAGGTGAGGTTCAGGAAGATATCTGATGTGAAGAGACACCTGAGGGAAGTGCATGGGGAGAGCAGCCTCGTGCTCGCCTACACGTGGAGTGAGAGGGAGGAGAGTGTGTGCGTGGGGGAGTGA
- Protein Sequence
- MEANNKKRCRKSKLVPRKYSDSDDENIALMQQEIELELANIKAQSLLKKLSASNLNSDKDFQFSIKVEIETCNEEHEDENTNVIDNSPITDTRNDESLMKNDTDKVTAGASSEIVEVKTEEVDVSIKEELGVDIVVNFETLDGETDLHTNCSGNDLSEDDNVRQDTCIEKSDIRVESVTSLACSGVAVSYNITDEMILHEFQMTSKQTTSDADKLIEMRLRNYYARDVTGTPTECRIDAGIQEALSKWKTWQYSYPTVRGPPLLYICSSCKIGFWHLHDFREHLRDHAYINISFVNEEHLSYIIGHISRNANKMILSLDSNCWRCGKGYKNHNDVCFQCNGCNSYFETCLMMSIHEGVCEDHKRKYANSEDTNVQRNCPVCSYKHWREEDMQRHILEYHSVRSDVPMTWSTKKCIKCGHMYNYHSLHECIEKPPIHACMFCFRKFRNKHNIMIHYWVTPPDFECRVCKKVLRKECMELDHLLSHSSCYSFVYKCIACAGSPCFLVKDGQLDHKHACHKRVRKPLFERIIVPNSLLYKLQNKNSNQKQICSREANVPPVKNAVFDYNLDVVKTIDADGGGVPKLCDAGVNKKKPNIILNVKREPAHSGSDEIKSKIKLSSTYRRDGTKRKAEIPIENDGDVKKMAISEWTGIKQEPIDFDDFVCVEVNERLKSGLEVKGLNLPIKFEVKEEFGVVDIGGGDGGDGDGDGDVAGDDLEDIADEDWNLQLLNEDGGIKSKRKKKNNTYSMNAKTYKKFGGEKYLKKMHQDNQFYRCSKCCCVFRNFYKYLLHFTSHKYRPMACPQCTAEFNSVDTLSQHVNLHIKYNFVCIHSIKTEKGDRNFQCKNCKELLSVSEFFLHWDRHLVLQESKEPAVCVVNMDGKPKLKEMVEHIQNPDKCLFRSRNCVECNKRFHRRNDFKRHYIEHLLADAYIELTKYGHLKCQICGAGFQSGDRYKRHLRDHASLPVYQCEMCDKAFSDSSNFSKHKKVHNLAVLICDTCGKKFQNKQYLIKHLQLHTTTKPIECEDCNKVFYSQSQYRRHLKKNKPKYRCQICRAAFKTVKDRCNHMWEAHQIRNCEADCPVCQVRFRKISDVKRHLREVHGESSLVLAYTWSEREESVCVGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -