Dpha020381.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000090.1:1357978-1361182[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0011 0.082 13.9 1.3 1 23 227 249 227 249 0.97 2 10 0.2 15 6.7 0.5 3 23 274 295 272 296 0.94 3 10 0.00031 0.024 15.6 0.2 2 23 317 338 316 338 0.94 4 10 0.00012 0.009 16.9 1.5 1 23 342 364 342 364 0.98 5 10 0.001 0.076 14.0 0.2 1 23 371 394 371 394 0.96 6 10 6.5 5e+02 2.0 0.1 3 23 402 423 400 423 0.82 7 10 5.7e-05 0.0043 17.9 1.1 1 23 429 452 429 452 0.97 8 10 0.00013 0.0096 16.8 1.4 1 23 458 480 458 480 0.98 9 10 7.9e-06 0.0006 20.6 0.9 1 23 486 508 486 508 0.98 10 10 5.2e-06 0.0004 21.1 3.1 1 23 513 535 513 536 0.96
Sequence Information
- Coding Sequence
- atggcgGAAgttcatttaaagaaaaatcaagGACCTATAATAAACCCCGCGCTATGTCGATGTTGTcgctcaataaaaaaatgtcgacTGCTAACAAGTGAATACGAATTTATGAATACGAAAGAAGTGTATTCAGATTTGTTAATGGATGTTTTTGGGCTTCTTCTATCCCACTTAGATGGAGATAATAAAGACTGCTGTATTTGTGCCACATgtgtgtctcgaattcgagaagCAAATGCATTTAGACAACAAGTTCTACAATCTGAACAAATGTTCCTCGAGGCAAGGTTGCAGAGTAAAGAAGaTTTTAACCAAATCATCAAGACTGAGGTAAAGACGGAACCTATCTGTGACTCGGACACACCTGATGTTACTGATGATGTGATTGAAGAGCAtaatgaagaAAATAACGATAAAATGGATACACAAGAAGTcatagataataaaacaaaagcagtaaaaaaaacaaaagatggTCATAAAAGTAAAGCGAGCAAAGAACTGAGGAATGGCAAGAGGCTGAGAGTGAAGCTGGACAAACTGTTGATAACAAATGGTCTTCCCAAGAAAATGGCGTCCAAAGACATTATAGATCACGACCAAATGGCTTATTCTAACACTGTAACTATAGTACAGAATTCTTTCGTCTGTCCGTTTCATAATAGAATCAGCAtttattattgctattattGCAAGGATCAGTTCACCAACCCCAGTGAACTGAGAGACCATACTCTCCTTCACGACCCAAAAGAACTGTTCGAGGACACCACGGAGAACAAGAAAATACCAAAAATAGACATAACAAGGATAGACTGTCGGCTTTGTCCGGAGAAAATTGACGATCTGGACACTTTCAAGAAGCACATCACTAGTGTTCACCACAAATCCGTGTATCCCATCACTAACGAGTTCCTGAAGTTCCGTTTGACGTTGAACAACTTGACGTGCACAGAGTGTGGCAGCGCTTTCCCATATTTTGACTCGTTGAAAAAGCATATGGTCGACCACTTTGGTACTTTCACCTGTGATATATGCGGCACTTGCTTCTTGGAGCAGGCGTCTCTCCGCACTCACATAAAGTCGCACAGCAAAATCGATTTGAACTTCCCCTGCGAGATATGCGGGAAGAATTTGAAATCCAAGTACAGCAGGACGCTCCACGTGGCCACGGTGCACGAGAAGAAGCCGTTCGTCAATTGCTACAAGTGTGACGCCGCTTTCCTCTCGTACGCACTGAGGAACCGCCATTTGATTGAGGTTCACGGGGACAAGAGAACGTTTCCATGCGAGTTGTGCGACAAGGTGTACAACAGGCGGAAGACGCTCATGGAGCATAATCGAAGGAATCACCTAAAGGTGTACAGGCATCAGTGTGATTTGTGCGACCAGAGGTTCTACTTGCCGTCCCGTTTGAAAGAACACATGGCAACGCACACCGGCGAAAGGAACTTTAGATGTGAATTCTGCGACAAGAGCTATCCTCGTCTCCAATCCTTGCAGGAACATGTCCGGAGTCACAGTAATGAAAGGTACAAGTGTGACGTCTGCAGTTCTAGTTTTACACAGAGTGGGAGTTTGAAGAGCCATATGAAAAGTCACCATCAGGTATTTGAAATGGAGGGTAGtttcaaattgtaa
- Protein Sequence
- MAEVHLKKNQGPIINPALCRCCRSIKKCRLLTSEYEFMNTKEVYSDLLMDVFGLLLSHLDGDNKDCCICATCVSRIREANAFRQQVLQSEQMFLEARLQSKEDFNQIIKTEVKTEPICDSDTPDVTDDVIEEHNEENNDKMDTQEVIDNKTKAVKKTKDGHKSKASKELRNGKRLRVKLDKLLITNGLPKKMASKDIIDHDQMAYSNTVTIVQNSFVCPFHNRISIYYCYYCKDQFTNPSELRDHTLLHDPKELFEDTTENKKIPKIDITRIDCRLCPEKIDDLDTFKKHITSVHHKSVYPITNEFLKFRLTLNNLTCTECGSAFPYFDSLKKHMVDHFGTFTCDICGTCFLEQASLRTHIKSHSKIDLNFPCEICGKNLKSKYSRTLHVATVHEKKPFVNCYKCDAAFLSYALRNRHLIEVHGDKRTFPCELCDKVYNRRKTLMEHNRRNHLKVYRHQCDLCDQRFYLPSRLKEHMATHTGERNFRCEFCDKSYPRLQSLQEHVRSHSNERYKCDVCSSSFTQSGSLKSHMKSHHQVFEMEGSFKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00780468;
- 90% Identity
- -
- 80% Identity
- -