Basic Information

Insect: Dryadula phaetusa
Gene Symbol: ZIPIC
Assembly: GCA_032432895.1
Location: JAOYRS010000094.1:608979-623208[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 5.5e-05 0.0042 17.9 2.8 1 23 253 275 253 275 0.99

2 12 0.08 6.1 8.0 0.6 2 23 283 305 282 305 0.89

3 12 0.84 64 4.8 2.5 1 23 309 331 309 331 0.94

4 12 0.0072 0.55 11.3 1.5 1 23 336 359 336 359 0.95

5 12 0.0011 0.083 13.8 0.1 3 23 365 386 364 386 0.97

6 12 0.068 5.2 8.2 0.1 3 20 396 413 395 415 0.95

7 12 0.39 30 5.8 0.0 2 23 427 449 426 449 0.92

8 12 0.0046 0.35 11.9 3.8 3 23 457 478 456 478 0.96

9 12 0.00015 0.012 16.5 1.0 2 23 498 519 498 519 0.97

10 12 1.4e-05 0.0011 19.8 1.5 1 23 525 547 525 547 0.99

11 12 1.2e-05 0.00091 20.0 3.2 1 23 553 575 553 575 0.94

12 12 5.3e-07 4e-05 24.3 1.2 1 23 581 604 581 604 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	5.5e-05	0.0042	17.9	2.8	1	23	253	275	253	275	0.99
2	12	0.08	6.1	8.0	0.6	2	23	283	305	282	305	0.89
3	12	0.84	64	4.8	2.5	1	23	309	331	309	331	0.94
4	12	0.0072	0.55	11.3	1.5	1	23	336	359	336	359	0.95
5	12	0.0011	0.083	13.8	0.1	3	23	365	386	364	386	0.97
6	12	0.068	5.2	8.2	0.1	3	20	396	413	395	415	0.95
7	12	0.39	30	5.8	0.0	2	23	427	449	426	449	0.92
8	12	0.0046	0.35	11.9	3.8	3	23	457	478	456	478	0.96
9	12	0.00015	0.012	16.5	1.0	2	23	498	519	498	519	0.97
10	12	1.4e-05	0.0011	19.8	1.5	1	23	525	547	525	547	0.99
11	12	1.2e-05	0.00091	20.0	3.2	1	23	553	575	553	575	0.94
12	12	5.3e-07	4e-05	24.3	1.2	1	23	581	604	581	604	0.98

Sequence Information

Coding Sequence: atgaacgaTCAGGTGCTATGTCGTATTTGTTTCGCTTCTGACAATGTGAAGCTGTGCAGTGTGTTCTCGTTCGGTTTGAATGAAGCCTATGAAAAATTCGTTGGTATTAAGAACAACGAACAAACGGGTCTTCcagaatatatatgtagttattgcACGACATTTCTGTTCAAATGCTTGGCCTTCCAAGAGAAATGTCACTCTGCGTACAATTTTATGAAGTATGCCTTGGAGGTGAATACCCCAATAGATCAATTGGAGGAGGCGTCGAAGTTCAAACTGCCGTATtcaacaaataacaataatattgtaatacacATGGAGCATACTGAACAAGAACCGATAAAACAAGAATTCGTACCAATAATAGAAGTTAAAATAGAAAGTTACGAACCAAAGAAGaagagaaagaagaagaagaaagaagcaACGCCAGTGAAAACGGAGGGAGTGCCCAGTTGCGATGAGATGTACAACGATGACAATGATAACGGGGAGCCGTTTAATGACAGCCAACACGATGAGCCACGAGCCAATGATGTGGAATGTGATGGGACACAAAATAATGATGACTTGCAGAAAAATGATCACCAGGATAATGATCCTCGGGGCAAGGATAACGAGAATAACGATGCGGTGAACGATCCGGTGATACACGAGCTGCTGGACgacgttaaaataataattctaactaCTGAAGAGCAAATGCAAGAGATAGAAGATAGAAAAACGTCgtcgaattatttaaattcatcatacaaatgtaattattgCTTCAAAGGCTTTATGATGCCGTCCACGTTCAGGAATCACATGTTGAAGCATGATCCGGATAGGGGAGAATTAAAGTGTGACATTTGCAAGTCGAGATTTTCTGAAGTCCGAGCTCTCAGGGCGCATGTGGTGCACACGCACGAGAGGAAATATATTTGCAAGCTATGCGACCACGTGTCGAGGAGTAGCCACCGAGCAAAGGAGCACGCGAAATGGCACAACGGCTACACATTCTCTTGTAAAATATGCGGAGCTACTTTTgcTAAATCCACGAGCCACCTAACGCACATTCGCCTCCAACACCCTTCGAACAACGCGTGCGATATATGCGGGGAGTCCTTCATAGGGGAGTTCGGGTTGAAAATGCACAAGCGAAAAGCGCATAGTTCAGATCCCAATCCAGTCACTCTGTGCACTCGCTGCGACTTCAAGTTTGTGTCCGTTGAAGCCTTATCGAGACATCTTGAATATGCCAAGAACGAAAGATGTCACACTGATATGAAgccCTGTGCACAATGTGGAGAGGAATTCTTGTCTGAAGAAGCCCTTAACGATCACGTGAAGGACGAGCATAAAGAGGAAGAGGCTGCTTTTTGTCATGATTGCAAGCGCAGTTTCACGTCAACCCGCTCGTACGAGATCCACTTCCAGCGCGTGCATCTCGGCGTGAAGCTGAAGCAAAGAAAACGAGCAACGTGCAAGCGTGGCGAGAGCGCCGTGTGTGAAGTGTGCGGGTATAAGTGTATTtcaaaCGCAACTTTGATGTATCATCAAAGAACACACACCGGGGAAAAACCGTACCAGTGTACAGAGTGTCCGAAAAAGTTTAGTGTGTTTCAGAGATTACAGATACATCTAAGAACTCACACCGGGGAAACCCCGTACCAATGTCAGCACTGTCCCAAGGCGTTTAAACATAAAGCGGCTTTGAACAGACATGATCGGGTGCACACAGGGGCGAAGCCCTACACCTGCCCGCACTGTGGTAAAGCGTTCTCGCAATCCAACTCCATGAAACTACATGTAAACACAGTACATCTGAAGTTACCGGCGCCCTACAGGAACAGACGCcctaaattatga
Protein Sequence: MNDQVLCRICFASDNVKLCSVFSFGLNEAYEKFVGIKNNEQTGLPEYICSYCTTFLFKCLAFQEKCHSAYNFMKYALEVNTPIDQLEEASKFKLPYSTNNNNIVIHMEHTEQEPIKQEFVPIIEVKIESYEPKKKRKKKKKEATPVKTEGVPSCDEMYNDDNDNGEPFNDSQHDEPRANDVECDGTQNNDDLQKNDHQDNDPRGKDNENNDAVNDPVIHELLDDVKIIILTTEEQMQEIEDRKTSSNYLNSSYKCNYCFKGFMMPSTFRNHMLKHDPDRGELKCDICKSRFSEVRALRAHVVHTHERKYICKLCDHVSRSSHRAKEHAKWHNGYTFSCKICGATFAKSTSHLTHIRLQHPSNNACDICGESFIGEFGLKMHKRKAHSSDPNPVTLCTRCDFKFVSVEALSRHLEYAKNERCHTDMKPCAQCGEEFLSEEALNDHVKDEHKEEEAAFCHDCKRSFTSTRSYEIHFQRVHLGVKLKQRKRATCKRGESAVCEVCGYKCISNATLMYHQRTHTGEKPYQCTECPKKFSVFQRLQIHLRTHTGETPYQCQHCPKAFKHKAALNRHDRVHTGAKPYTCPHCGKAFSQSNSMKLHVNTVHLKLPAPYRNRRPKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00779701;
90% Identity: -
80% Identity: -