Dpha019227.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000081.1:6687256-6690082[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0017 0.13 13.2 4.1 1 23 158 181 158 181 0.98 2 17 0.00037 0.029 15.3 1.5 1 23 190 213 190 213 0.97 3 17 0.029 2.2 9.3 0.7 2 23 226 248 226 248 0.97 4 17 0.003 0.23 12.5 0.8 1 23 257 280 257 280 0.95 5 17 3.7e-05 0.0028 18.5 1.3 1 23 292 315 292 315 0.97 6 17 1.1e-05 0.00086 20.1 0.5 2 23 344 366 343 366 0.97 7 17 0.00039 0.03 15.2 1.3 2 23 376 398 375 398 0.96 8 17 0.015 1.2 10.2 0.9 2 20 403 421 402 423 0.92 9 17 0.0016 0.12 13.3 3.5 2 21 428 447 427 450 0.94 10 17 0.012 0.91 10.6 1.3 2 23 459 481 458 481 0.94 11 17 0.00012 0.0091 16.9 3.8 1 23 486 509 486 509 0.97 12 17 0.0002 0.015 16.2 0.6 2 23 520 542 519 542 0.95 13 17 0.0006 0.046 14.7 0.6 1 23 569 592 569 592 0.92 14 17 0.0017 0.13 13.2 0.9 2 23 626 647 625 647 0.97 15 17 1.7 1.3e+02 3.8 0.7 3 23 655 677 653 677 0.91 16 17 0.014 1.1 10.3 0.2 1 23 713 735 713 735 0.97 17 17 0.18 14 6.9 2.0 1 23 741 764 741 764 0.96
Sequence Information
- Coding Sequence
- atgtcaataaaaaaagataaaatgaaTACAAACGATATTCAAATAGAAAAGGATGATGAAAGCAGAAAGGACCCTACAACTTTTCTACCTGAGGAACCTATGacatatgaaattaaaactaaaaaaaagaaaaaaaagaaaaaacaagagGATCCATTCAAAGATATTGAGGAAAAAGTTATAGTTCCAGTAACAACTGTATTTGAGTCTACGACAGAGAGTGAAGTGGAAACAAAGCAGGTGTTGGACCCCgaagttaatataaaagtagaaaatatagAAGTTGAACTGGATTTCAATGattttgcaAACGACAATGGGTTAATGTTGGAAGGACCTCAAAGTGAAGACAGTCAAGAGCCAGTTGTTAAAATAGAAGAACAAAATCGTGAAGCGGTGCTACTTACTTTCGAAAGCATTATCACTGACAAAAGTGTTATAGGCTTTGGGCCTGTCGCACCTGCCCCCAATTACGTGTGTAAAGTTTGCCATTTAGTGTTTCAGTCCACAAAAACTCTGAGGATGCATCAGAAAAGAAAACACAAAGTGTTTAGAAAATCCTTCAAATATATATGCCATTATTGTGCTATGTCTTATGAGCAGAAAAACAGTTTGGTAGCGCATATTAAAAGGAAGCATGGGCCGGACTCGTCTAACGATGACGGTGAAGAGCGGACTTGTGAAGTTTGTGCGTTAGTTTTCAAAGGAATGACTAGATTAAGAATGCATATGAGGAGGAAACATGGTTCTTTTGAAGAATCTTTCAAGCACATTTGCGACGAGTGCGGCCTAACGTACGATAAATATAGAAGTCTAATAGTTCACGTGCAAAGGAAACATACGAACGATAAGAAACCGGTGTTAAACCAATGGTACAATTGTCCGTTTTGTCCGAAAGTATTTACCAAGCGTGAAACGTATGCGCGACACGTCCAGAGGAAACATCGTGTGAACGACGAGGACGAAGTGAAACAAGAGCAATCTACTACTTTATTAGAAAACTTCAAAAATGAAGCAACAGGCGAAATTACGTGCAACGAATGTCCATTAGTCTTCTCTTCACTCAATTACTTAAAGTTGCACATGAGAAGAAAGCACAATGCCCTGAAAGACGATTTTCGTCTAAAATGTCGAATATGTAATTTATCATACGATAAAATTGAAAGTTTAAAACGTCATATACGACGGAAACACGACAAGGGCTCGTATTGTGACGTGTGCGATAAACAATTCGAAACTAGggaaatgtatttaaatcacACACATAAGAGGATGGTCCAAGAATGTCATATTTGTGGCCTTATATTCGCGTCCCAAGGCGGTCTCTGCAAACACTTACGATGTACGCACAAAATACAATCGCCCAAAACTGTTGTATGCAACTTATGCAATGAAACGTTTCACGATAAGCGTCAATTAAAACCTCATTATTTGAAAGTCCACTTGAAAGTATCTTATACATGTTCGTTTTGTCATAAAGTGTTCAAAGCCAAGGAGAGCTACAGGCGACACATTCTTATCAAACACCCGTCAAACACTGCTAAGGTTAACGAGCAGCAATGCGATAAATGTCCGGAAAAGTTTCCCGATGAATTTGAACTGTGCCGCCATATTAATTTAGCACACGGTAAAGTACAAAATGGGGTATTGGAAAACGAAGCTTTGTTAGAGATAAAGAAAGAGGAGGTCGATATACCGGATACGTTCCAATGTTCAAAATGCCCTGAAAATTATAACAGCTGGGACGAATTGAAGCTACATTTCGAACAGAATCACCTAATGGTGGCAGTGACGCAGTGTCAAGTGTGTGGGGAAATGGTTCCTGGGAACGAATTGGACAAgcattttaaaagttttcacACAATAACATCGGTCCAGTGTAAATATTGTGAATTTGAAACGTCCAACCGAGCAAGTATGACTCAACATATGTTGAGACACAAAAACGCAGCTACCCTCAATTGTGATTTCGCTGgctgtaaatataaaacgttttacGAGGGTGCAATGGAGAAACACAAACGGAAACACAGGGACCAAGGTGTTAAATTACAATGCTCGCAGTGTCCGTTTCAaactatgaataaatatatacttaaatatcacGAGGAGGCGCACGTGACTGGCAAGAAAAGGTATTCCTGTGATCAGTGTGACTACGCAACAATACTTCCAGCGAATTTGGTTCAgcacaaatataaacattcatcAGAGAAGAGGTTTAAATGTGAAGTGTGTCCGTTCGCAACTAAGTACAATACGTCGTTACGTTTCCACGTTAAGAAGAAACATTGTGATCTCCCAACATTCAGttaa
- Protein Sequence
- MSIKKDKMNTNDIQIEKDDESRKDPTTFLPEEPMTYEIKTKKKKKKKKQEDPFKDIEEKVIVPVTTVFESTTESEVETKQVLDPEVNIKVENIEVELDFNDFANDNGLMLEGPQSEDSQEPVVKIEEQNREAVLLTFESIITDKSVIGFGPVAPAPNYVCKVCHLVFQSTKTLRMHQKRKHKVFRKSFKYICHYCAMSYEQKNSLVAHIKRKHGPDSSNDDGEERTCEVCALVFKGMTRLRMHMRRKHGSFEESFKHICDECGLTYDKYRSLIVHVQRKHTNDKKPVLNQWYNCPFCPKVFTKRETYARHVQRKHRVNDEDEVKQEQSTTLLENFKNEATGEITCNECPLVFSSLNYLKLHMRRKHNALKDDFRLKCRICNLSYDKIESLKRHIRRKHDKGSYCDVCDKQFETREMYLNHTHKRMVQECHICGLIFASQGGLCKHLRCTHKIQSPKTVVCNLCNETFHDKRQLKPHYLKVHLKVSYTCSFCHKVFKAKESYRRHILIKHPSNTAKVNEQQCDKCPEKFPDEFELCRHINLAHGKVQNGVLENEALLEIKKEEVDIPDTFQCSKCPENYNSWDELKLHFEQNHLMVAVTQCQVCGEMVPGNELDKHFKSFHTITSVQCKYCEFETSNRASMTQHMLRHKNAATLNCDFAGCKYKTFYEGAMEKHKRKHRDQGVKLQCSQCPFQTMNKYILKYHEEAHVTGKKRYSCDQCDYATILPANLVQHKYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01033959;
- 90% Identity
- iTF_00457407;
- 80% Identity
- -