Dpha018345.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000079.1:385275-387731[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.027 2.1 9.4 0.3 5 23 341 359 340 359 0.96 2 11 0.0043 0.33 12.0 0.2 3 23 367 387 365 387 0.95 3 11 0.19 14 6.8 0.3 2 23 396 417 395 417 0.94 4 11 1.2e-07 9.1e-06 26.3 0.9 2 23 422 443 422 443 0.98 5 11 0.00072 0.055 14.4 4.3 1 23 449 471 449 471 0.98 6 11 0.00018 0.014 16.3 0.3 1 20 475 494 475 496 0.94 7 11 5.7e-05 0.0044 17.9 0.1 1 23 529 552 529 552 0.96 8 11 9.1e-05 0.007 17.2 1.4 1 23 571 593 571 593 0.98 9 11 6.9e-05 0.0052 17.6 4.5 1 23 599 621 599 621 0.98 10 11 0.0025 0.19 12.7 0.3 3 23 629 649 627 649 0.98 11 11 3.7e-06 0.00028 21.6 0.8 1 23 655 678 655 678 0.97
Sequence Information
- Coding Sequence
- ATGGAATCTTGGTCGGATTTGTGTCGCTGCTGTCTTGCTCCAGATTCTGAAGTGTCACTTTTCGATACCGAAGATAATGTAGGAGAAAAGTTTTTAGAAATTACTACTATTGAGCCAAGAGAAGATGATGGTTTACCACAAAGGTTATGTGGTGATTGTTTCACATTAATGACTTCAGCGTATCAGTTCAGGATGCAGTGTATGAAAGTGGATAAAGAGTTGAAGCTTCAATTGGAATCTCTTATAACACAAAGTGAAAAGGATGACCTATCAGAAATGTCATTTTCACAGATAGAAACACAATTGAAAGCTAATGAAGACATGACAATTGAAGATCTTGCTAAGGAATCCTTTAAGCAACttgaatctataataaaaacagaGCCAAATGATAGTGATGATGACTATTACTATGTAGTTGTGGTAGACAACCCAAAAGATGACAAATCTGATGATGAAAAAAGTAAGGACTTGGCCGCAGAGTCTGAAATTAGGGAAGAAGGAAATTTAAATAGTGAAGTAAGCACAAATCAGTTTGAGAGTACAATAGATTCTTTTCTAATGTCTAAACCAAAGGTTTCAATGCATGTACCAGACACTATTTTAGAGAATGAGGAAGTGGAAAATGATGATTTTGGTGAACCAATGGATGTGGATGTCAACCATATGTCCCAAGAACTGTCCATCAGTGAGGATTCTCAAGAGAAGTCCAATGAATATGCTATACCATTGACACAAGACATGATTGAAAATTTATCTAattcaaaaaattacattaaaattcttaCACCATCTGGTGtagaaaaaactattttagttaAAAGTGATAGTATTAAGTACTTAACAGGAGATGGTTTAAAGCTAGATGGGGATGCAATGTCTCAAGAAGTTATTTTGTATGAAGGAGACGACTCACAATTTCAATTAGTTAAGTGTGATGGCTCAGAGTTAGTCATAGAATATGCGGATGATAGCCAAATTGCAACAGTTCTGCAGCAAGAAGATGGCACTTTTTTATGTGATTGTGGTGAACAGTTTGATGATTTGGACACTTATGAGAAACACCAATATAAACACAATCCTGCCGGAGACCATCTATGTAATTTGTGCGGCAAAGGCTTTGAAACTGCAGAAATCTTGACCGGTCACATGTTAATACATAGTAATCCAACTGGTCCTGTTGTAACTTGCCCATTCTGTAATGTAAGTATAAAAAGAAGTGGTTTAACACAACATATCAAATATATGCATAATAGCAAGCCGCAGTGTGATATCTGTTCTAAAACATTTGCCAATCAAAATAACTTGAGACGTCACATGATGATACATAGTGGTGTCAAGGAGTTTGAATGTGACATCTGTAAAAAGAGATTTCATCAAAAAATAACTATGCAAACCCATAGACTGACACATATAAGCCCATTCACCTGCAGTCAGTGTGGgatcaaatttgaaaataaaggcGACTTAACCACACACAAAGGTACCGATGAATGCTCCAAATCTAGGATTTTTAAAGTGAAAGAGGAATTAATGAAAACGCTCAAGCGAGAAGTCACTAGAGATGATGGTAAATTACTTGGATATGCCTGTTCACTTTGTAAAAAGATGTTTTCAGTGGAATCAGCGTTAGAGCAACATATAGAAAGTTCCCACGTCATCGAATCTGATGGGCAACAAGATAAGAAAGTTAATAAGACTAGCAAAAGATTTGAATGTTGTATTTGTGGCAAAGGGTGTTCAAGCCAGGCCATGTTGATAATGCATGAAAGGGTGCACACTAATGAGCGACCCTTTCCATGTCAGCTTTGTTCtttaagatttaaaactaaaactcaCTTAAGAACTCACCAACTAACTCATACTCGAGAGAAGAAGTTTGGTTGTTcggtttgtatgaaattttttgCACTAAAAGGTAATTTAGTGGTACATTTACGGACACATACTGGTGAAAGGCCATATGTATGTTCTATTTGTGGTGAAGCTTTCATAGATTCTAAATATCTTAAGAAACACAAGCAGAAGAGGCATGCTATAGACAATGTACCGTGGGATAAATATGAATAA
- Protein Sequence
- MESWSDLCRCCLAPDSEVSLFDTEDNVGEKFLEITTIEPREDDGLPQRLCGDCFTLMTSAYQFRMQCMKVDKELKLQLESLITQSEKDDLSEMSFSQIETQLKANEDMTIEDLAKESFKQLESIIKTEPNDSDDDYYYVVVVDNPKDDKSDDEKSKDLAAESEIREEGNLNSEVSTNQFESTIDSFLMSKPKVSMHVPDTILENEEVENDDFGEPMDVDVNHMSQELSISEDSQEKSNEYAIPLTQDMIENLSNSKNYIKILTPSGVEKTILVKSDSIKYLTGDGLKLDGDAMSQEVILYEGDDSQFQLVKCDGSELVIEYADDSQIATVLQQEDGTFLCDCGEQFDDLDTYEKHQYKHNPAGDHLCNLCGKGFETAEILTGHMLIHSNPTGPVVTCPFCNVSIKRSGLTQHIKYMHNSKPQCDICSKTFANQNNLRRHMMIHSGVKEFECDICKKRFHQKITMQTHRLTHISPFTCSQCGIKFENKGDLTTHKGTDECSKSRIFKVKEELMKTLKREVTRDDGKLLGYACSLCKKMFSVESALEQHIESSHVIESDGQQDKKVNKTSKRFECCICGKGCSSQAMLIMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICGEAFIDSKYLKKHKQKRHAIDNVPWDKYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00160072;
- 90% Identity
- -
- 80% Identity
- -