Dpha020417.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000091.1:97603-102651[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.00022 0.017 16.0 2.3 1 23 81 104 81 104 0.95 2 19 0.00026 0.02 15.8 0.8 2 23 132 154 131 154 0.96 3 19 3.9e-05 0.0029 18.4 0.3 1 23 176 199 176 199 0.93 4 19 2.3e-05 0.0018 19.1 2.8 3 23 206 226 205 227 0.94 5 19 0.32 24 6.1 1.5 1 13 233 245 233 252 0.83 6 19 0.0014 0.11 13.5 0.7 2 23 323 345 322 345 0.95 7 19 1.1e-05 0.00085 20.1 0.7 1 23 350 373 350 373 0.98 8 19 0.0021 0.16 12.9 3.6 1 23 378 401 378 401 0.96 9 19 0.0029 0.23 12.5 2.7 2 21 404 423 404 426 0.94 10 19 0.097 7.4 7.7 2.3 3 21 431 449 429 450 0.93 11 19 0.0069 0.53 11.3 0.3 1 21 501 521 501 524 0.90 12 19 0.8 61 4.8 0.1 2 23 552 574 551 574 0.95 13 19 0.00041 0.031 15.2 0.1 2 23 597 619 596 619 0.96 14 19 4e-05 0.003 18.4 0.2 3 23 626 647 625 647 0.94 15 19 0.14 11 7.2 4.3 2 23 652 674 651 674 0.93 16 19 0.0015 0.12 13.4 4.0 1 23 679 702 679 702 0.97 17 19 4.1e-06 0.00031 21.5 5.0 1 23 706 729 706 729 0.97 18 19 0.00027 0.02 15.8 0.3 2 23 736 757 735 757 0.96 19 19 9.2e-06 0.0007 20.4 0.3 1 23 763 785 763 785 0.98
Sequence Information
- Coding Sequence
- ATGAAGTTGGTGCACGCGGATGAAGAGCTCAAATGTGGTTTTTGCCTAAAATCTATGAGTACGAAATTAGGATTTTTACGTCACGCTGCAAAATGTACAGAACACGGAGAGAATGGAGATGAAGCATTTGTAGTCGATGACGATGATGATAAGAAACCGGCCGTAGTTCAAATTAGAAACAATATTGCCTGCATACTTAACATGTCCACAGCGATTCCGTTTAAATACTTTATGAGCAGATTCAGATGTTTCTACTGTCCTAAAGATTTCACCGATTGCAAAGAACTGAAAGAACACACGGCAATTGAACATCCGATttgtgatataaattttaaatgtatgaaattgcGGAACAGACAGGAAGGATGTGTTAAAATTGATACATCGACGCTTTCTTGTAAAATCTGTCATAAAACTTTACCGAATTTAGATTCTCTAACTGATCACTTGATAACTCAACATAAAGCGCCATACGATAAATCAGTAGATAGCAATATGCAGTCTTATAAGTTAATTAAAGACAGCTATCCATGTCCGATTTGTGAGGAAGTTTATACTCACTTTAGTTCACTGTTAAAGCATATGGGTCAAGTCCATACggataataaaaacatatgcaTGCATTGTGGAAAGTCATTTCGAAATTTACCCAATTTAAGGGTCCACATTTCCAATCACCACAAAACGACAGGCTCCTATAAGTGTGATCGATGTGATCAGGAGTTCTCATCCAATAGAAAGCATACCAAAGCTCACGGCCTGTGTAGTACAAGTGATTACGCATTGAAACTTATTAAAGGAAATCATATAGAGGTCAAGATAGATGTCTCAGAGATAGCCTGTGAAATATGTTGCGAACCGTTGACGAGTTTTGATGAAATTATAGATCATTTAACTAATAAACACGAGCTGGAGTATGATAAGACTGTAGATATACCAATACAGGAGTATCAGCTGTCAGACTGTCGATGTCGGATATGTGGCCAGGCGTTCGCATACTTTGGATATTTAATAACGCACACTAACGTGGATCACCCGCAAAATACATTTGTTTGTGATAATTGTGGGGAGAAATTCAACAAAAAACGGGACCTCGCCATTCATCTAAGGCGTTACCATCAAGAAGGTGGATATCCTTGCGATGAATGTACAGAAATCTTTGATACTCACAACCTTTTATgtaaacatcaaaataattttcactttagaAGATGCAAAATATGTGATACACGGTTTCCGTCGTACACTCTGTTAAGAAGACACGTTAAGTGCGATCATTCTGGTGACAACTGTCCGTTTTGCTCAAAAAAATGTCAAACTTCGCATGGTCTTATACAGCACATCACAAAGTGTACTAAGAAAAAGAGTATGAAAGTAAAACAAGCTCTCGACGAGGAAACAATACAACCTAGCAAGAAAAAGAACGTTTaccaaataagaaaaaatatacagtgCGTTCTGAATATGTCCACTGCAGTGCCGTTCAAGTTCTTCACAAAATATTCTTGTTTCTATTGTTCTAAAAGTTACGTAGAATTTGATGATCTCAAAGAGCATGTAGTAGCGGTGCATCCAGCTTGTGATCTgaaagaaaaatgtatgaaaaattgtaaaggCGAGAGGATATCCGTCAAAGTTGACATTTCGTCGTTATCGTGTAGAGTATGCTTTGAATCAATAGACAATGTAGATACTTTAATAGATCATCTCATAACTAAACATGGAGCTGAATACGATAAATCAACAACTGGATGTTTTGAATCGTTCAAAATAATCAAAGACAATATTCCCTGCCCAATTTGTTCTAACGTTTTCAGGTATTTCGGATCGCTTCTAAGGCATATTAATTCTGAGcacagtaataataatagaatttgcGATTTTTGCGGTCGTAGTTTTAAGAATGTGGCTAATTTGAAGGTGCACATAACCTATGCGCACACTGGTTCCTGTGAGTGTGATGTATGCGGCGCTAAGTACAAGAATCCGTGGTGTTTAGGGCGACATAAAGCCAAATGTCACAATGCTAAAGATTTTCAATGCACAAAATGTCCAGAGCGGTTCCAATCTCAATATCATAAACAAAAACATCTAATCAAAGTCCATGATATAGGTCACAAGTGTTCATACTGCGGGAAAATGTTCACGCGAAACTCGTTTATGAAAGATCACATTCGTAGGACTCATCTGAAGGAGAAAAACGTGCCGTGTACCGTTTGTAACGAGAAGTTTTTTGACAATTATCTATTAAGGCTCCATATGGTGAAGCATAAAGGGGAGAGAAAGTTCACTTGTGATATCTGTGGCAAAGCGTTTCTCAGGCGTAGTAATTTAAGTGCTCACACAGAAATGCACAAAAAATATGGCCACGTTTAG
- Protein Sequence
- MKLVHADEELKCGFCLKSMSTKLGFLRHAAKCTEHGENGDEAFVVDDDDDKKPAVVQIRNNIACILNMSTAIPFKYFMSRFRCFYCPKDFTDCKELKEHTAIEHPICDINFKCMKLRNRQEGCVKIDTSTLSCKICHKTLPNLDSLTDHLITQHKAPYDKSVDSNMQSYKLIKDSYPCPICEEVYTHFSSLLKHMGQVHTDNKNICMHCGKSFRNLPNLRVHISNHHKTTGSYKCDRCDQEFSSNRKHTKAHGLCSTSDYALKLIKGNHIEVKIDVSEIACEICCEPLTSFDEIIDHLTNKHELEYDKTVDIPIQEYQLSDCRCRICGQAFAYFGYLITHTNVDHPQNTFVCDNCGEKFNKKRDLAIHLRRYHQEGGYPCDECTEIFDTHNLLCKHQNNFHFRRCKICDTRFPSYTLLRRHVKCDHSGDNCPFCSKKCQTSHGLIQHITKCTKKKSMKVKQALDEETIQPSKKKNVYQIRKNIQCVLNMSTAVPFKFFTKYSCFYCSKSYVEFDDLKEHVVAVHPACDLKEKCMKNCKGERISVKVDISSLSCRVCFESIDNVDTLIDHLITKHGAEYDKSTTGCFESFKIIKDNIPCPICSNVFRYFGSLLRHINSEHSNNNRICDFCGRSFKNVANLKVHITYAHTGSCECDVCGAKYKNPWCLGRHKAKCHNAKDFQCTKCPERFQSQYHKQKHLIKVHDIGHKCSYCGKMFTRNSFMKDHIRRTHLKEKNVPCTVCNEKFFDNYLLRLHMVKHKGERKFTCDICGKAFLRRSNLSAHTEMHKKYGHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -