Dpha021092.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- EGR3
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000095.1:934561-966810[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 3.7e-05 0.0028 18.5 0.1 1 23 10 32 10 32 0.96 2 14 0.00011 0.0084 17.0 3.4 3 23 40 61 38 61 0.95 3 14 3.7e-05 0.0028 18.5 0.1 1 23 115 137 115 137 0.96 4 14 0.00019 0.015 16.2 3.4 3 23 145 166 143 166 0.95 5 14 3.7e-05 0.0028 18.5 0.1 1 23 239 261 239 261 0.96 6 14 0.00011 0.0084 17.0 3.4 3 23 269 290 267 290 0.95 7 14 3.7e-05 0.0028 18.5 0.1 1 23 344 366 344 366 0.96 8 14 0.00011 0.0084 17.0 3.4 3 23 374 395 372 395 0.95 9 14 3.7e-05 0.0028 18.5 0.1 1 23 449 471 449 471 0.96 10 14 0.00011 0.0084 17.0 3.4 3 23 479 500 477 500 0.95 11 14 3.7e-05 0.0028 18.5 0.1 1 23 554 576 554 576 0.96 12 14 0.00011 0.0084 17.0 3.4 3 23 584 605 582 605 0.95 13 14 3.7e-05 0.0028 18.5 0.1 1 23 659 681 659 681 0.96 14 14 0.24 18 6.5 0.1 3 11 689 697 687 703 0.86
Sequence Information
- Coding Sequence
- ATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGCTGTCACATCTGCAACAAGCGGTTCAGCCAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGCGACCCCGGCCGTCAGCAActttagtgattatattcaaaataggAGGGAGGGGGAGAAAACGGGAGCAGTTCTGGGACTCACTTCCACAATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGTTGTCACGTCTGCAACAAGCGGTTCAGCCAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGTGACCCCGGCCGTCAGCAACttcagtgattatattcaaaataggAAACAGACAAACACCAACAAAACTCTCTTAAACTGGAAACAGACGGGTGTAATAATAGAGGGAGGGGGAGAAACGGGAGCAGTTCTGGGACTCACTTCCACAATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGCTGTCACATCTGCAACAAGCGGTTCAGCCAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGCGACCCCGGCCGTCAGCAACttcagtgattatattcaaaataggAGGGAGGGGGAGAAAACGGGAGCAGTTCTGGGACTCACTTCCACAATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGCTGTCACATCTGCAACAAGCGGTTCAGCCAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGCGACCCCGGCCGTCAGCAACttcagtgattatattcaaaataggAGGGAGGGGGAGAAAACGGGAGCAGTTCTGGGACTCACTTCCACAATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGCTGTCACATCTGCAACAAGCGGTTCAGCCAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGCGACCCCGGCCGTCAGCAACttcagtgattatattcaaaataggAGGGAGGGGGAGAAAACGGGAGCAGTTCTGGGACTCACTTCCACAATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGCTGTCACATCTGCAACAAGCGGTTCAGCCAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGCGACCCCGGCCGTCAGCAACttcagtgattatattcaaaataggAGGGAGGGGGAGAAAACGGGAGCAGTTCTGGGACTCACTTCCACAATGCCGCGCGCACCCGGGGAGCGCCCGCACGCCTGCGCGCTGTGCCCGCGCGCCTTCGCGCAGCGCCCCGCGCTCACCAGGCACCTGCGGGTGCACACAGGGGCGAAGCCCTACGGCTGTCACATCTGCAACAAGCGGTTCAGCCTAGTCAAACTCCTTGCACTCGCACGTGCGCGCCTTGCATCTGAAGATACCGCGGAACCGAACCCGCGACAACCTGGATACCGCGACCCCGGCCGTCAGCAACTTCagtga
- Protein Sequence
- MPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHICNKRFSQSNSLHSHVRALHLKIPRNRTRDNLDTATPAVSNFSDYIQNRREGEKTGAVLGLTSTMPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHVCNKRFSQSNSLHSHVRALHLKIPRNRTRDNLDTVTPAVSNFSDYIQNRKQTNTNKTLLNWKQTGVIIEGGGETGAVLGLTSTMPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHICNKRFSQSNSLHSHVRALHLKIPRNRTRDNLDTATPAVSNFSDYIQNRREGEKTGAVLGLTSTMPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHICNKRFSQSNSLHSHVRALHLKIPRNRTRDNLDTATPAVSNFSDYIQNRREGEKTGAVLGLTSTMPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHICNKRFSQSNSLHSHVRALHLKIPRNRTRDNLDTATPAVSNFSDYIQNRREGEKTGAVLGLTSTMPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHICNKRFSQSNSLHSHVRALHLKIPRNRTRDNLDTATPAVSNFSDYIQNRREGEKTGAVLGLTSTMPRAPGERPHACALCPRAFAQRPALTRHLRVHTGAKPYGCHICNKRFSLVKLLALARARLASEDTAEPNPRQPGYRDPGRQQLQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00621399;
- 90% Identity
- iTF_00621398;
- 80% Identity
- -