Basic Information

Gene Symbol
rcor2
Assembly
GCA_032432895.1
Location
JAOYRS010000017.1:1316218-1321898[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-09 1.4e-06 28.8 0.0 3 46 133 176 131 176 0.97
2 2 2.2e-11 2.9e-08 34.2 0.0 3 46 399 442 397 442 0.96

Sequence Information

Coding Sequence
ATGGTTTTGGCTGAAAGAAGTAATGATGTTCGAAACGGGAAGCGTTCGCGAGGGCCGAGCCCTAATGGTCACGGTAGTCCAGATTCCAGTTCAGAGGACGAGAATGCAGTAGTGCCATTTGCAGCCGAAAAGATAAGAGTGGGACGAGATTTTCAGGCTATATGCCCTGAGCTAGAACCTTTAGAGCAAAGGAGACCTGATCAAATATCTGACAGAGCCTTACTTGTGTGGTCACCAACTTCTGATATATCtgatataaaatTGGATGAATACATCACTACAGCAAAGGAGAAATATGGTTATAATGGGGAACAGGCACTTGGGATGTTATTCTGGCACAAACATGATCTTAACAGAGCTTCAATGGATCTTGCTAATTTTACTCCTTTTCCTGATGAATGGACAGTGGAAGATAAAGTGTTATTTGAGCAAGCTTTTCAGTTCCATGGCAAAAGTTTCCACAGAATACGACAAATGttgcCAGATAAATCAATAGCATctcttgttaaatattattactcatGGAAAAAGACAAGGTCACGAACATCTTTAATGGATGTTGTAAGTGAAGGTCGCAATGCTGCAGGCTCTGGAACAGGAAAAAGAGAGTCTGGAGCTGGATCAGAACCTGGTGGTTCAGATAAAGATTCTGATAATGATGAAAAGAAGTGGACTTTACACCGCGGTATTGTCCGAGGAGGCAAGCCCCTACCGGCCGGCAGACCTACTCTTCGCGGCCATCATGGCGAGGGAGACGGAGGCGAGGCGGGCAAGTGGTGTACGGTGTGCGGCATTCTGTGTACGCAGACCACGGCGCACAATTCTCACAAATTGTGTCAGGCATGCCTCGTGCACGCCAGACGCACGGGCACCATGAGACCGTTGTGCGGGCCTTCAGGGCGGCGGGGACCCGGGTCTAAACAACAGCGGTACAAGCATCGGCTGCCGCGCGGCATATACATCAATCACGACGATCTCGTTGCCATGGCAACCGGCCCGCAGCCCGGCGAGCCCGCCCAGCCCGGCTCCGTCAATCAGGGCGAAGCCCTACTCAAGGCCATGGACAGAGAGATTATCTCGCTCAAGAGACAAGTCCAACAAAACAAACAACAGTTAAGTGCGATGAAACGCAAGGTTGGAGACACGGGTGTGGAAGAGCTCAGACCCGGGGAACCCCCGGCAAAAATTAACTCGCGATGGACTAACGATGAATTACTAATGGCTGTTACTGCTGTTAGGAAATATGgtAAAGACTTCCAAGCTATCGCAGAAACGTTAGGAACGAAGACTGAAGCCCACATCCGTACATTCTTCATATCTTACCGCCGCCGCTACAACCTGGACGCGGTGCTGCGGGAACACGAGGCGGACCGCGGTAACGCCAATCATATTCAAGCTGgcaCAACAAGCACCGAGACCACGGAAAATGATGTGGATAATAGTAATGCTAATAATGGGACAAATACCTCGCAAACTAACTCAAAAGAAGAAAAAACAGAAGTAGACAGCGAGGGTGTAGCAATAGGCGCGTCCGCGGAGCAAGGCGGTCCGCCCACCACGCCGCCCAAGCACAAGAGCAAGTGA
Protein Sequence
MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENAVVPFAAEKIRVGRDFQAICPELEPLEQRRPDQISDRALLVWSPTSDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRSRTSLMDVVSEGRNAAGSGTGKRESGAGSEPGGSDKDSDNDEKKWTLHRGIVRGGKPLPAGRPTLRGHHGEGDGGEAGKWCTVCGILCTQTTAHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGEPAQPGSVNQGEALLKAMDREIISLKRQVQQNKQQLSAMKRKVGDTGVEELRPGEPPAKINSRWTNDELLMAVTAVRKYGKDFQAIAETLGTKTEAHIRTFFISYRRRYNLDAVLREHEADRGNANHIQAGTTSTETTENDVDNSNANNGTNTSQTNSKEEKTEVDSEGVAIGASAEQGGPPTTPPKHKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00018116;
90% Identity
iTF_00197313;
80% Identity
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