Dpha017972.1
Basic Information
- Insect
- Dryadula phaetusa
- Gene Symbol
- -
- Assembly
- GCA_032432895.1
- Location
- JAOYRS010000076.1:927369-927875[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.5e-12 4.5e-09 36.3 0.0 3 34 12 43 11 49 0.93 2 2 8.5 5.1e+03 -2.2 0.1 14 23 139 148 136 149 0.79
Sequence Information
- Coding Sequence
- ATGAAGAGAAAAAACAAAAGTGGCAAGGCGGCCGAAAACTTAAAGCTAGCTGTCGAAAAAGTTGTGAATCAAGAAATGTCAATACGGGAAGCCTCTGAGCGTTACAATATACCAAAGAGCACTTTGttcgataaattaaaattattaaaaaaaggtgaTGAGGCTGAGTACAAACCTGCCATAGGGAAATTTCAGAAAACATTCTCGGATGAGCATGAACATTTGTTGGAATGCCACGCCAAGGAACTAGCTGACCGTTGCATGCCTCTGACTAAAAAAGAGTTTTTAAAACTGTCTTACGAGTTAGCTGAGAAGCTTAATTTACCCCACCGCTTTAACAATGAAAAGAGAATCGCGGGAAGACATTTTTATGAAGATTTTATTAAGAGACatccaaatttaatattaagaacatCAAAGTCGACAAGTTTAATGCGTGCCGCTggttttagtaaaaagcaaGTTGAgaatttctttacaaatttaCAGGAACTATTAGATACGTAA
- Protein Sequence
- MKRKNKSGKAAENLKLAVEKVVNQEMSIREASERYNIPKSTLFDKLKLLKKGDEAEYKPAIGKFQKTFSDEHEHLLECHAKELADRCMPLTKKEFLKLSYELAEKLNLPHRFNNEKRIAGRHFYEDFIKRHPNLILRTSKSTSLMRAAGFSKKQVENFFTNLQELLDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01181827;
- 90% Identity
- iTF_01181827;
- 80% Identity
- -