Basic Information

Gene Symbol
kn_1
Assembly
GCA_032432895.1
Location
JAOYRS010000040.1:4521081-4528272[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-115 5.9e-111 372.1 0.0 218 387 2 189 1 196 0.98
2 2 4.4e-10 5.5e-06 25.4 2.1 421 474 198 253 190 280 0.77

Sequence Information

Coding Sequence
ATGGTCGACGGGCCTCTGCTCGCGATATCTGACAACATGTTCGTACACAACAACAGCAAGCACGGGAGACGTGCGAAACGACTCGACCCCACTGAAGGTATTGATGCCGCGCCCGAAACTAATTCGGGGTTATATCCGCCGTTGCCCGTAGCAACGCCATGCATCAAGGCAATATCTCCTAGCGAAGGCTGGACGTCAGGGGGTTCTACTGTAATAATAGTGGGTGACAACTTTTTCGATGGACTCCAAGTGGTTTTTGGGACTATGCTTGTATGGAGTgagTTAATAACATCGCACGCGATCAGAGTGCAAACTCCGCCGCGACACATACCGGGCGTCGTCGAGGTCACGCTCTCCTACAAGAGCAAGCAGTTCTGTAAAGGCGCTCCCGGCAGATTTGTTTATGTTTCAGCTCTCAACGAGCCAACGATAGATTACGGATTTCAAAGACTCCAGAAACTTATACCGAGGCATCCTGGTGATCCAGAGAAGCTGCCGAAGGAAATAATTCTCAAACGAGCGGCGGACTTGGCCGAGGCGCTGTACTCGATGCCGCGCAATAACCAGCTCGGGCTCGGGCCGCGCTCGCCGCCCGCCAGCATGCCCTTCAACTCGTACAGCGGGCAGCTCGCCGTCAGCGTGCAGGACACCACCGCGTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGGTCGGTGTCGCCGCGCTACTGCTCGGCCGCGTCCACGCCGCACGCGCCCGCCTACCCGCAACACTACCCGCCCACGTCGCTCTTCAACACTTCTACGCGAATGAGCGGCCTCGTGTCGTCTCCGTTCAGTGTGAACCCGTTCTCCTTACCGACGTGCAGCGCGCAGCAGTACGCGCAGACCGCGCCGCTCGCTTCCAAGTAA
Protein Sequence
MVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIDAAPETNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGPRSPPASMPFNSYSGQLAVSVQDTTASQWTEEEYARSGGSVSPRYCSAASTPHAPAYPQHYPPTSLFNTSTRMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01362239;
90% Identity
iTF_01181692;
80% Identity
-